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Daniel Faria
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2020 – today
- 2024
- [j9]Daniel Faria, Patrícia Eugénio
, Marta Contreiras Silva, Laura Balbi, Georges Bedran, Ashwin Adrian Kallor, Susana Nunes, Aleksander Palkowski, Michal Waleron, Javier Antonio Alfaro, Catia Pesquita:
The Immunopeptidomics Ontology (ImPO). Database J. Biol. Databases Curation 2024 (2024) - [c47]Marta Contreiras Silva
Complex Multi-Ontology Alignment Through Geometric Operations on Language Embeddings. ECAI 2024: 1333-1340 - [c46]Daniel Faria, Tiago João Baptista, Pedro Rangel Henriques:
Upgrade of Lark Compiler Generator to Support Attribute Grammars. SLATE 2024: 7:1-7:16 - 2023
- [c45]Mina Abd Nikooie Pour, Alsayed Algergawy, Patrice Buche, Leyla Jael Castro, Jiaoyan Chen, Adrien Coulet, Julien Cufi, Hang Dong, Omaima Fallatah, Daniel Faria, Irini Fundulaki, Sven Hertling, Yuan He, Ian Horrocks, Martin Huschka, Liliana Ibanescu, Sarika Jain, Ernesto Jiménez-Ruiz, Naouel Karam, Patrick Lambrix, Huanyu Li
Results of the Ontology Alignment Evaluation Initiative 2023. OM@ISWC 2023: 97-139 - [c44]Daniel Faria, Marta Contreiras Silva, Pedro Cotovio, Lucas Ferraz, Laura Balbi, Catia Pesquita:
Results for Matcha and Matcha-DL in OAEI 2023. OM@ISWC 2023: 164-169 - [e1]Catia Pesquita
The Semantic Web - 20th International Conference, ESWC 2023, Hersonissos, Crete, Greece, May 28 - June 1, 2023, Proceedings. Lecture Notes in Computer Science 13870, Springer 2023, ISBN 978-3-031-33454-2 [contents] - 2022
- [c43]Tiago Guimarães
Blockchain Analytics - Real-time Log Management in Healthcare. ANT/EDI40 2022: 702-707 - [c42]Marta Contreiras Silva, Daniel Faria, Catia Pesquita:
Extending AgreementMakerLight to Perform Holistic Ontology Matching. ESWC (Satellite Events) 2022: 31-35 - [c41]Marta Contreiras Silva, Daniel Faria, Catia Pesquita:
Matching Multiple Ontologies to Build a Knowledge Graph for Personalized Medicine. ESWC 2022: 461-477 - [c40]Mina Abd Nikooie Pour
Results of the Ontology Alignment Evaluation Initiative 2022. OM@ISWC 2022: 84-128 - [c39]Daniel Faria, Marta Contreiras Silva, Pedro Cotovio, Patrícia Eugénio, Catia Pesquita:
Matcha and Matcha-DL results for OAEI 2022. OM@ISWC 2022: 197-201 - 2021
- [c38]Daniel Faria, Beatriz Lima, Marta Contreiras Silva, Francisco M. Couto, Catia Pesquita:
AML and AMLC results for OAEI 2021. OM@ISWC 2021: 131-136 - [c37]Ana Guerreiro, Catia Pesquita, Daniel Faria:
VOWLMap: graph-based ontology alignment visualization and editing. ISWC (Posters/Demos/Industry) 2021 - [c36]Beatriz Lima, Daniel Faria, Catia Pesquita:
Pattern-Guided Association Rule Mining for Complex Ontology Alignment. ISWC (Posters/Demos/Industry) 2021 - [c35]Beatriz Lima, Daniel Faria, Catia Pesquita:
Challenges of evaluating complex alignments. OM@ISWC 2021: 49-61 - [c34]Mina Abd Nikooie Pour, Alsayed Algergawy, Florence Amardeilh, Reihaneh Amini, Omaima Fallatah, Daniel Faria, Irini Fundulaki, Ian Harrow, Sven Hertling, Pascal Hitzler, Martin Huschka, Liliana Ibanescu, Ernesto Jiménez-Ruiz, Naouel Karam, Amir Laadhar, Patrick Lambrix, Huanyu Li, Ying Li, Franck Michel, Engy Nasr, Heiko Paulheim, Catia Pesquita, Jan Portisch, Catherine Roussey, Tzanina Saveta, Pavel Shvaiko, Andrea Splendiani, Cássia Trojahn, Jana Vatascinová, Beyza Yaman, Ondrej Zamazal, Lu Zhou:
Results of the Ontology Alignment Evaluation Initiative 2021. OM@ISWC 2021: 62-108 - [c33]Ana Guerreiro, Catia Pesquita, Daniel Faria:
VOWLMap: Graph-based Ontology Alignment Visualization and Editing. VOILA@ISWC 2021: 82-94 - [c32]Marta Contreiras Silva, Daniel Faria, Catia Pesquita:
Integrating knowledge graphs for explainable artificial intelligence in biomedicine. OM@ISWC 2021: 209-210 - 2020
- [j8]Cirenia Arias-Baldrich
CorkOakDB - The Cork Oak Genome Database Portal. Database J. Biol. Databases Curation 2020 (2020) - [j7]Lu Zhou
Towards evaluating complex ontology alignments. Knowl. Eng. Rev. 35: e21 (2020) - [j6]Daniel Faria, Alfio Ferrara
Crowd-assessing quality in uncertain data linking datasets. Knowl. Eng. Rev. 35: e33 (2020) - [c31]Mina Abd Nikooie Pour, Alsayed Algergawy, Reihaneh Amini, Daniel Faria, Irini Fundulaki, Ian Harrow, Sven Hertling, Ernesto Jiménez-Ruiz, Clément Jonquet, Naouel Karam, Abderrahmane Khiat, Amir Laadhar, Patrick Lambrix
Results of the Ontology Alignment Evaluation Initiative 2020. OM@ISWC 2020: 92-138 - [c30]Beatriz Lima, Daniel Faria, Francisco M. Couto, Isabel F. Cruz, Catia Pesquita:
OAEI 2020 results for AML and AMLC. OM@ISWC 2020: 154-160
2010 – 2019
- 2019
- [j5]Huanyu Li
User validation in ontology alignment: functional assessment and impact. Knowl. Eng. Rev. 34: e15 (2019) - [c29]Alsayed Algergawy, Daniel Faria, Alfio Ferrara, Irini Fundulaki, Ian Harrow, Sven Hertling, Ernesto Jiménez-Ruiz, Naouel Karam, Abderrahmane Khiat, Patrick Lambrix
Results of the Ontology Alignment Evaluation Initiative 2019. OM@ISWC 2019: 46-85 - [c28]Daniel Faria, Catia Pesquita, Teemu Tervo, Francisco M. Couto, Isabel F. Cruz:
AML and AMLC Results for OAEI 2019. OM@ISWC 2019: 101-106 - 2018
- [j4]Daniel Faria
Tackling the challenges of matching biomedical ontologies. J. Biomed. Semant. 9(1): 4:1-4:19 (2018) - [c27]Ernesto Jiménez-Ruiz, Tzanina Saveta, Ondrej Zamazal, Sven Hertling, Michael Röder, Irini Fundulaki, Axel-Cyrille Ngonga Ngomo, Mohamed Ahmed Sherif, Amina Annane, Zohra Bellahsene, Sadok Ben Yahia, Gayo Diallo, Daniel Faria, Marouen Kachroudi, Abderrahmane Khiat, Patrick Lambrix, Huanyu Li, Maximilian Mackeprang, Majid Mohammadi, Maciej Rybinski, Booma Sowkarthiga Balasubramani, Cássia Trojahn:
Introducing the HOBBIT platform into the ontology alignment evaluation campaign. OM@ISWC 2018: 49-60 - [c26]Alsayed Algergawy, Michelle Cheatham, Daniel Faria, Alfio Ferrara, Irini Fundulaki, Ian Harrow, Sven Hertling, Ernesto Jiménez-Ruiz, Naouel Karam, Abderrahmane Khiat, Patrick Lambrix, Huanyu Li, Stefano Montanelli, Heiko Paulheim, Catia Pesquita, Tzanina Saveta, Daniela Schmidt, Pavel Shvaiko, Andrea Splendiani, Élodie Thiéblin, Cássia Trojahn, Jana Vatascinová, Ondrej Zamazal, Lu Zhou:
Results of the Ontology Alignment Evaluation Initiative 2018. OM@ISWC 2018: 76-116 - [c25]Daniel Faria, Catia Pesquita, Booma Sowkarthiga Balasubramani, Teemu Tervo, David Carriço, Rodrigo Garrilha, Francisco M. Couto, Isabel F. Cruz:
Results of AML participation in OAEI 2018. OM@ISWC 2018: 125-131 - 2017
- [c24]Manel Achichi, Michelle Cheatham, Zlatan Dragisic, Jérôme Euzenat, Daniel Faria, Alfio Ferrara, Giorgos Flouris, Irini Fundulaki, Ian Harrow, Valentina Ivanova, Ernesto Jiménez-Ruiz, Kristian Kolthoff, Elena Kuss, Patrick Lambrix, Henrik Leopold, Huanyu Li, Christian Meilicke, Majid Mohammadi, Stefano Montanelli, Catia Pesquita, Tzanina Saveta, Pavel Shvaiko, Andrea Splendiani, Heiner Stuckenschmidt, Élodie Thiéblin, Konstantin Todorov, Cássia Trojahn, Ondrej Zamazal:
Results of the Ontology Alignment Evaluation Initiative 2017. OM@ISWC 2017: 61-113 - [c23]Daniel Faria, Booma S. Balasubramani, Vivek R. Shivaprabhu, Isabela Mott, Catia Pesquita, Francisco M. Couto, Isabel F. Cruz:
Results of AML in OAEI 2017. OM@ISWC 2017: 122-128 - 2016
- [c22]João Cardoso, Marzieh Bakhshandeh, Daniel Faria
Ontology-Based Approach for Heterogeneity Analysis of EA Models. Business Process Management Workshops 2016: 131-142 - [c21]Manel Achichi, Michelle Cheatham, Zlatan Dragisic, Jérôme Euzenat, Daniel Faria, Alfio Ferrara, Giorgos Flouris, Irini Fundulaki, Ian Harrow, Valentina Ivanova, Ernesto Jiménez-Ruiz, Elena Kuss, Patrick Lambrix, Henrik Leopold, Huanyu Li, Christian Meilicke, Stefano Montanelli, Catia Pesquita, Tzanina Saveta, Pavel Shvaiko, Andrea Splendiani, Heiner Stuckenschmidt, Konstantin Todorov, Cássia Trojahn dos Santos, Ondrej Zamazal:
Results of the Ontology Alignment Evaluation Initiative 2016. OM@ISWC 2016: 73-129 - [c20]Daniel Faria, Catia Pesquita, Booma S. Balasubramani, Catarina Martins, João Cardoso, Hugo Curado, Francisco M. Couto, Isabel F. Cruz:
OAEI 2016 results of AML. OM@ISWC 2016: 138-145 - [c19]Zlatan Dragisic, Valentina Ivanova, Patrick Lambrix
User Validation in Ontology Alignment. ISWC (1) 2016: 200-217 - 2015
- [c18]Catarina Martins, Daniel Faria, Catia Pesquita:
Visualization and editing of biomedical ontology alignments in AgreementMakerLight. ICBO 2015 - [c17]Michelle Cheatham, Zlatan Dragisic, Jérôme Euzenat, Daniel Faria, Alfio Ferrara, Giorgos Flouris, Irini Fundulaki, Roger Granada, Valentina Ivanova, Ernesto Jiménez-Ruiz, Patrick Lambrix, Stefano Montanelli, Catia Pesquita, Tzanina Saveta, Pavel Shvaiko, Alessandro Solimando, Cássia Trojahn dos Santos, Ondrej Zamazal:
Results of the Ontology Alignment Evaluation Initiative 2015. OM 2015: 60-115 - [c16]Daniel Faria, Catarina Martins, Amruta Nanavaty, Daniela Oliveira, Booma Sowkarthiga, Aynaz Taheri, Catia Pesquita, Francisco M. Couto, Isabel F. Cruz:
AML results for OAEI 2015. OM 2015: 116-123 - 2014
- [c15]Catia Pesquita
Towards Visualizing the Alignment of Large Biomedical Ontologies. DILS 2014: 104-111 - [c14]Daniel Faria, Ernesto Jiménez-Ruiz, Catia Pesquita, Emanuel Santos, Francisco M. Couto:
Towards Annotating Potential Incoherences in BioPortal Mappings. ISWC (2) 2014: 17-32 - [c13]Zlatan Dragisic, Kai Eckert, Jérôme Euzenat, Daniel Faria, Alfio Ferrara, Roger Granada, Valentina Ivanova, Ernesto Jiménez-Ruiz, Andreas Oskar Kempf, Patrick Lambrix, Stefano Montanelli, Heiko Paulheim, Dominique Ritze, Pavel Shvaiko, Alessandro Solimando, Cássia Trojahn dos Santos, Ondrej Zamazal, Bernardo Cuenca Grau:
Results of the Ontology Alignment Evaluation Initiative 2014. OM 2014: 61-104 - [c12]Daniel Faria, Catarina Martins, Amruta Nanavaty, Aynaz Taheri, Catia Pesquita, Emanuel Santos, Isabel F. Cruz, Francisco M. Couto:
AgreementMakerLight results for OAEI 2014. OM 2014: 105-112 - [c11]Catia Pesquita, Michelle Cheatham, Daniel Faria, Joana Barros, Emanuel Santos, Francisco M. Couto:
Building reference alignments for compound matching of multiple ontologies using OBO cross-products. OM 2014: 172-173 - [c10]Daniel Faria, Catia Pesquita, Emanuel Santos, Isabel F. Cruz, Francisco M. Couto:
AgreementMakerLight 2.0: Towards Efficient Large-Scale Ontology Matching. ISWC (Posters & Demos) 2014: 457-460 - 2013
- [c9]Daniel Faria
The AgreementMakerLight Ontology Matching System. OTM Conferences 2013: 527-541 - [c8]Catia Pesquita, Daniel Faria, Emanuel Santos, Francisco M. Couto:
To repair or not to repair: reconciling correctness and coherence in ontology reference alignments. OM 2013: 13-24 - [c7]Daniel Faria, Catia Pesquita, Emanuel Santos, Isabel F. Cruz, Francisco M. Couto:
AgreementMakerLight results for OAEI 2013. OM 2013: 101-108 - [c6]Catia Pesquita
What's in a 'nym'? Synonyms in Biomedical Ontology Matching. ISWC (1) 2013: 526-541 - [i3]Francisco M. Couto, Daniel Faria, Bruno Tavares, Pedro Gonçalves, Paulo Veríssimo:
Benchmarking some Portuguese S&T system research units. CoRR abs/1302.0420 (2013) - [i2]Emanuel Santos, Daniel Faria, Catia Pesquita, Francisco M. Couto:
Ontology alignment repair through modularization and confidence-based heuristics. CoRR abs/1307.5322 (2013) - 2012
- [i1]Daniel Faria, Catia Pesquita, Emanuel Santos, Francisco M. Couto, Cosmin Stroe, Isabel F. Cruz:
Testing the AgreementMaker System in the Anatomy Task of OAEI 2012. CoRR abs/1212.1625 (2012) - 2011
- [c5]Bruno Tavares, Hugo P. Bastos, Daniel Faria, João D. Ferreira, Tiago Grego, Catia Pesquita, Francisco M. Couto:
The Biomedical Ontology Applications (BOA) Framework. ICBO 2011 - [c4]William Leal, Micah McCreery, Daniel Faria:
The OCRC Fuel Cell Lab Safety System: A Self-Stabilizing Safety-Critical System. SSS 2011: 326-340
2000 – 2009
- 2009
- [j3]Daniel Faria
Enzyme classification with peptide programs: a comparative study. BMC Bioinform. 10 (2009) - [j2]Catia Pesquita
Semantic Similarity in Biomedical Ontologies. PLoS Comput. Biol. 5(7) (2009) - [c3]Catia Pesquita
Measuring coherence between electronic and manual annotations in biological databases. SAC 2009: 806-807 - 2008
- [j1]Catia Pesquita
Metrics for GO based protein semantic similarity: a systematic evaluation. BMC Bioinform. 9(S-5) (2008) - [c2]André O. Falcão, Daniel Faria
Peptide programs: applying fragment programs to protein classification. DTMBIO 2008: 37-44 - [c1]Hugo P. Bastos, Catia Pesquita
BOLOS: BLAST & Ontology Linked-hOmologue Stars. SAC 2008: 1278-1281
Coauthor Index
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last updated on 2024-11-15 19:29 CET by the dblp team
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