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Xiyun Jin
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2020 – today
- 2023
- [j12]Wenyi Yang, Pingping Wang
, Meng Luo, Yideng Cai
DeepCCI: a deep learning framework for identifying cell-cell interactions from single-cell RNA sequencing data. Bioinform. 39(10) (2023) - 2022
- [j11]Rui Cheng
Identification of alternative splicing-derived cancer neoantigens for mRNA vaccine development. Briefings Bioinform. 23(2) (2022) - [j10]Wenyang Zhou, Chang Xu, Meng Luo, Pingping Wang, Zhaochun Xu
MutCov: A pipeline for evaluating the effect of mutations in spike protein on infectivity and antigenicity of SARS-CoV-2. Comput. Biol. Medicine 145: 105509 (2022) - [j9]Xiaoyu Lin, Huan Nie, Ran Tang, Pingping Wang, Xiyun Jin, Qinghua Jiang, Fang Han, Na Chen, Yu Li:
Network analysis between neuron dysfunction and neuroimmune response based on neural single-cell transcriptome of COVID-19 patients. Comput. Biol. Medicine 150: 106055 (2022) - 2021
- [j8]Mengying Zhang, Xiyun Jin, Junyi Li, Yi Tian, Qi Wang, Xinhui Li, Juan Xu, Yongsheng Li, Xia Li:
CeRNASeek: an R package for identification and analysis of ceRNA regulation. Briefings Bioinform. 22(3) (2021) - [j7]Yan Huang
Comprehensive analysis of partial methylation domains in colorectal cancer based on single-cell methylation profiles. Briefings Bioinform. 22(6) (2021) - [j6]Xiyun Jin, Wenyang Zhou, Meng Luo, Pingping Wang, Zhaochun Xu
Global characterization of B cell receptor repertoire in COVID-19 patients by single-cell V(D)J sequencing. Briefings Bioinform. 22(6) (2021) - [j5]Zhaochun Xu
DLpTCR: an ensemble deep learning framework for predicting immunogenic peptide recognized by T cell receptor. Briefings Bioinform. 22(6) (2021)
2010 – 2019
- 2019
- [j4]Yongsheng Li
Systematic review regulatory principles of non-coding RNAs in cardiovascular diseases. Briefings Bioinform. 20(1): 66-76 (2019) - [j3]Yongsheng Li
Systematic review of computational methods for identifying miRNA-mediated RNA-RNA crosstalk. Briefings Bioinform. 20(4): 1193-1204 (2019) - [j2]Tingting Shao, Guangjuan Wang, Hong Chen
Survey of miRNA-miRNA cooperative regulation principles across cancer types. Briefings Bioinform. 20(5): 1621-1638 (2019) - [j1]Chunjie Jiang
Landscape of the long non-coding RNA transcriptome in human heart. Briefings Bioinform. 20(5): 1812-1825 (2019)
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