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Dachuan Zhang

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This is just a disambiguation page, and is not intended to be the bibliography of an actual person. Any publication listed on this page has not been assigned to an actual author yet. If you know the true author of one of the publications listed below, you are welcome to contact us.

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2020 – today

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2023
[j30]
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  - journals/bmcbi/CaiLZXHLGH23
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Pengli Cai, Sheng Liu, Dachuan Zhang, Huadong Xing, Mengying Han, Dongliang Liu, Linlin Gong, Qian-Nan Hu:
SynBioTools: a one-stop facility for searching and selecting synthetic biology tools. BMC Bioinform. 24(1): 152 (2023)
[j29]
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Jiyao Wang, Farideh Chitsaz, Myra K. Derbyshire, Noreen R. Gonzales, Marc Gwadz, Shennan Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Mingzhang Yang, Dachuan Zhang, Chanjuan Zheng, Christopher J. Lanczycki, Aron Marchler-Bauer:
The conserved domain database in 2023. Nucleic Acids Res. 51(D1): 384-388 (2023)
2022
[j28]
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Haojie Huang, Gongming Zhou, Xuejun Liu, Lei Deng, Chen Wu, Dachuan Zhang, Hui Liu:
Contrastive learning-based computational histopathology predict differential expression of cancer driver genes. Briefings Bioinform. 23(5) (2022)
[j27]
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Dandan Sun, Shaozhen Ding, Pengli Cai, Dachuan Zhang, Mengying Han, Qian-Nan Hu:
BioBulkFoundary: a customized webserver for exploring biosynthetic potentials of bulk chemicals. Bioinform. 38(22): 5137-5138 (2022)
[j26]
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Guoqing Wu, Xi Chen, Zhifeng Shi, Dachuan Zhang, Zhaoyu Hu, Ying Mao, Yuanyuan Wang, Jinhua Yu:
Convolutional neural network with coarse-to-fine resolution fusion and residual learning structures for cross-modality image synthesis. Biomed. Signal Process. Control. 71(Part): 103199 (2022)
[j25]
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Xiaocong Xu, Dachuan Zhang, Xiaoping Liu, Jinpei Ou, Xinxin Wu:
Simulating multiple urban land use changes by integrating transportation accessibility and a vector-based cellular automata: a case study on city of Toronto. Geo spatial Inf. Sci. 25(3): 439-456 (2022)
[j24]
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Haoming Zhuang, Xiaoping Liu, Yuchao Yan, Dachuan Zhang, Jialyu He, Jinqiang He, Xinchang Zhang, Honghui Zhang, Manchun Li:
Integrating a deep forest algorithm with vector-based cellular automata for urban land change simulation. Trans. GIS 26(4): 2056-2080 (2022)
[i3]
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  - journals/corr/abs-2204-11994
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Haojie Huang, Gongming Zhou, Xuejun Liu, Lei Deng, Chen Wu, Dachuan Zhang, Hui Liu:
Contrastive learning-based computational histopathology predict differential expression of cancer driver genes. CoRR abs/2204.11994 (2022)
2021
[j23]
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  - journals/aisy/ZhangZJWYLWWXC21
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Dachuan Zhang, Jiawei Zhang, Yukun Jian, Baoyi Wu, Huizhen Yan, Huanhuan Lu, Shuxin Wei, Si Wu, Qunji Xue, Tao Chen:
Multi-Field Synergy Manipulating Soft Polymeric Hydrogel Transformers. Adv. Intell. Syst. 3(4): 2000208 (2021)
[j22]
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  - journals/bioinformatics/RenZTCZH21
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Ailin Ren, Dachuan Zhang, Yu Tian, Pengli Cai, Tong Zhang, Qian-Nan Hu:
Transcriptor: a comprehensive platform for annotation of the enzymatic functions of transcripts. Bioinform. 37(3): 434-435 (2021)
[j21]
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Dachuan Zhang, Tong Zhang, Sheng Liu, Dandan Sun, Shaozhen Ding, Xingxiang Cheng, Pengli Cai, Ailin Ren, Mengying Han, Dongliang Liu, Cancan Jia, Linlin Gong, Rui Zhang, Huadong Xing, Weizhong Tu, Junni Chen, Qian-Nan Hu:
SARS2020: an integrated platform for identification of novel coronavirus by a consensus sequence-function model. Bioinform. 37(8): 1182-1183 (2021)
[j20]
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Mengying Han, Dachuan Zhang, Shaozhen Ding, Yu Tian, Xingxiang Cheng, Le Yuan, Dandan Sun, Dongliang Liu, Linlin Gong, Cancan Jia, Pengli Cai, Weizhong Tu, Junni Chen, Qian-Nan Hu:
ChemHub: a knowledgebase of functional chemicals for synthetic biology studies. Bioinform. 37(22): 4275-4276 (2021)
[j19]
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Jialyu He, Xia Li, Penghua Liu, Xinxin Wu, Jinbao Zhang, Dachuan Zhang, Xiaojuan Liu, Yao Yao:
Accurate Estimation of the Proportion of Mixed Land Use at the Street-Block Level by Integrating High Spatial Resolution Images and Geospatial Big Data. IEEE Trans. Geosci. Remote. Sens. 59(8): 6357-6370 (2021)
[i2]
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  - journals/corr/abs-2102-11033
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Dachuan Zhang, Haoyang Zhang, Zhisheng Wei, Yan Li, Zhiheng Mao, Chunmeng He, Haorui Ma, Xin Zeng, Xiaoling Xie, Xingran Kou, Bingwen Zhang:
IFoodCloud: A Platform for Real-time Sentiment Analysis of Public Opinion about Food Safety in China. CoRR abs/2102.11033 (2021)
2020
[j18]
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  - journals/biodb/SunCTDZCH20
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Dandan Sun, Xingxiang Cheng, Yu Tian, Shaozhen Ding, Dachuan Zhang, Pengli Cai, Qian-Nan Hu:
EnzyMine: a comprehensive database for enzyme function annotation with enzymatic reaction chemical feature. Database J. Biol. Databases Curation 2020 (2020)
[j17]
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  - journals/bioinformatics/WangYZLGMPWLMWB20
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Jiyao Wang, Philippe Youkharibache, Dachuan Zhang, Christopher J. Lanczycki, Renata C. Geer, Thomas Madej, Lon Phan, Minghong Ward, Shennan Lu, Gabriele H. Marchler, Yanli Wang, Stephen H. Bryant, Lewis Y. Geer, Aron Marchler-Bauer:
iCn3D, a web-based 3D viewer for sharing 1D/2D/3D representations of biomolecular structures. Bioinform. 36(1): 131-135 (2020)
[j16]
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Yu Tian, Ling Wu, Le Yuan, Shaozhen Ding, Fu Chen, Tong Zhang, Ailin Ren, Dachuan Zhang, Weizhong Tu, Junni Chen, Qian-Nan Hu:
BCSExplorer: a customized biosynthetic chemical space explorer with multifunctional objective function analysis. Bioinform. 36(5): 1642-1643 (2020)
[j15]
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Xingxiang Cheng, Dandan Sun, Dachuan Zhang, Yu Tian, Shaozhen Ding, Pengli Cai, Qian-Nan Hu:
RxnBLAST: molecular scaffold and reactive chemical environment feature extractor for biochemical reactions. Bioinform. 36(9): 2946-2947 (2020)
[j14]
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  - journals/nar/LuWCDGGGHMSTYYZ20
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Shennan Lu, Jiyao Wang, Farideh Chitsaz, Myra K. Derbyshire, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, Gabriele H. Marchler, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Mingzhang Yang, Dachuan Zhang, Chanjuan Zheng, Christopher J. Lanczycki, Aron Marchler-Bauer:
CDD/SPARCLE: the conserved domain database in 2020. Nucleic Acids Res. 48(Database-Issue): D265-D268 (2020)
[j13]
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  - journals/nar/DingTCZCSYCTWH20
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Shaozhen Ding, Yu Tian, Pengli Cai, Dachuan Zhang, Xingxiang Cheng, Dandan Sun, Le Yuan, Junni Chen, Weizhong Tu, Dong-Qing Wei, Qian-Nan Hu:
novoPathFinder: a webserver of designing novel-pathway with integrating GEM-model. Nucleic Acids Res. 48(Webserver-Issue): W477-W487 (2020)

2010 – 2019

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2017
[j12]
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Aron Marchler-Bauer, Bo Yu, Lianyi Han, Jane He, Christopher J. Lanczycki, Shennan Lu, Farideh Chitsaz, Myra K. Derbyshire, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, Fu Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Zhouxi Wang, Roxanne A. Yamashita, Dachuan Zhang, Chanjuan Zheng, Lewis Y. Geer, Stephen H. Bryant:
CDD/SPARCLE: functional classification of proteins via subfamily domain architectures. Nucleic Acids Res. 45(Database-Issue): D200-D203 (2017)
[j11]
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Peiling Cui, Dachuan Zhang, Shan Yang, Haitao Li:
Friction Compensation Based on Time-Delay Control and Internal Model Control for a Gimbal System in Magnetically Suspended CMG. IEEE Trans. Ind. Electron. 64(5): 3798-3807 (2017)
[i1]
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Yao Yao, Xiaoping Liu, Dachuan Zhang, Zhaotang Liang, Yatao Zhang:
Simulation of Urban Expansion and Farmland Loss in China by Integrating Cellular Automata and Random Forest. CoRR abs/1705.05651 (2017)
2015
[j10]
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  - journals/nar/Marchler-BauerDGLCGGHGHLLMSTWYZZB15
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Aron Marchler-Bauer, Myra K. Derbyshire, Noreen R. Gonzales, Shennan Lu, Farideh Chitsaz, Lewis Y. Geer, Renata C. Geer, Jane He, Marc Gwadz, David I. Hurwitz, Christopher J. Lanczycki, Fu Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Zhouxi Wang, Roxanne A. Yamashita, Dachuan Zhang, Chanjuan Zheng, Stephen H. Bryant:
CDD: NCBI's conserved domain database. Nucleic Acids Res. 43(Database-Issue): 222-226 (2015)
2014
[j9]
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  - journals/nar/MadejLZTGMB14
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Thomas Madej, Christopher J. Lanczycki, Dachuan Zhang, Paul A. Thiessen, Renata C. Geer, Aron Marchler-Bauer, Stephen H. Bryant:
MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 42(Database-Issue): 297-303 (2014)
2013
[j8]
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Aron Marchler-Bauer, Chanjuan Zheng, Farideh Chitsaz, Myra K. Derbyshire, Lewis Y. Geer, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, Christopher J. Lanczycki, Fu Lu, Shennan Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Dachuan Zhang, Stephen H. Bryant:
CDD: conserved domains and protein three-dimensional structure. Nucleic Acids Res. 41(Database-Issue): 348-352 (2013)
2012
[j7]
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Thomas Madej, Kenneth J. Addess, Jessica H. Fong, Lewis Y. Geer, Renata C. Geer, Christopher J. Lanczycki, Chunlei Liu, Shennan Lu, Aron Marchler-Bauer, Anna R. Panchenko, Jie Chen, Paul A. Thiessen, Yanli Wang, Dachuan Zhang, Stephen H. Bryant:
MMDB: 3D structures and macromolecular interactions. Nucleic Acids Res. 40(Database-Issue): 461-464 (2012)
[j6]
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  - journals/nar/ShoemakerZTTFMBMP12
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Benjamin A. Shoemaker, Dachuan Zhang, Manoj Tyagi, Ratna R. Thangudu, Jessica H. Fong, Aron Marchler-Bauer, Stephen H. Bryant, Thomas Madej, Anna R. Panchenko:
IBIS (Inferred Biomolecular Interaction Server) reports, predicts and integrates multiple types of conserved interactions for proteins. Nucleic Acids Res. 40(Database-Issue): 834-840 (2012)
2011
[j5]
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Aron Marchler-Bauer, Shennan Lu, John B. Anderson, Farideh Chitsaz, Myra K. Derbyshire, Carol DeWeese-Scott, Jessica H. Fong, Lewis Y. Geer, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, John D. Jackson, Zhaoxi Ke, Christopher J. Lanczycki, Fu Lu, Gabriele H. Marchler, Mikhail Mullokandov, Marina V. Omelchenko, Cynthia L. Robertson, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Dachuan Zhang, Naigong Zhang, Chanjuan Zheng, Stephen H. Bryant:
CDD: a Conserved Domain Database for the functional annotation of proteins. Nucleic Acids Res. 39(Database-Issue): 225-229 (2011)
2010
[j4]
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Benjamin A. Shoemaker, Dachuan Zhang, Ratna R. Thangudu, Manoj Tyagi, Jessica H. Fong, Aron Marchler-Bauer, Stephen H. Bryant, Tom Madej, Anna R. Panchenko:
Inferred Biomolecular Interaction Server - a web server to analyze and predict protein interacting partners and binding sites. Nucleic Acids Res. 38(Database-Issue): 518-524 (2010)

2000 – 2009

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2009
[j3]
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Aron Marchler-Bauer, John B. Anderson, Farideh Chitsaz, Myra K. Derbyshire, Carol DeWeese-Scott, Jessica H. Fong, Lewis Y. Geer, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, Siqian He, David I. Hurwitz, John D. Jackson, Zhaoxi Ke, Christopher J. Lanczycki, Cynthia A. Liebert, Chunlei Liu, Fu Lu, Shennan Lu, Gabriele H. Marchler, Mikhail Mullokandov, James S. Song, Asba Tasneem, Narmada Thanki, Roxanne A. Yamashita, Dachuan Zhang, Naigong Zhang, Stephen H. Bryant:
CDD: specific functional annotation with the Conserved Domain Database. Nucleic Acids Res. 37(Database-Issue): 205-210 (2009)
2007
[j2]
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Aron Marchler-Bauer, John B. Anderson, Myra K. Derbyshire, Carol DeWeese-Scott, Noreen R. Gonzales, Marc Gwadz, Luning Hao, Siqian He, David I. Hurwitz, John D. Jackson, Zhaoxi Ke, Dmitri M. Krylov, Christopher J. Lanczycki, Cynthia A. Liebert, Chunlei Liu, Fu Lu, Shennan Lu, Gabriele H. Marchler, Mikhail Mullokandov, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Jodie J. Yin, Dachuan Zhang, Stephen H. Bryant:
CDD: a conserved domain database for interactive domain family analysis. Nucleic Acids Res. 35(Database-Issue): 237-240 (2007)
2005
[j1]
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Aron Marchler-Bauer, John B. Anderson, Praveen F. Cherukuri, Carol DeWeese-Scott, Lewis Y. Geer, Marc Gwadz, Siqian He, David I. Hurwitz, John D. Jackson, Zhaoxi Ke, Christopher J. Lanczycki, Cynthia A. Liebert, Chunlei Liu, Fu Lu, Gabriele H. Marchler, Mikhail Mullokandov, Benjamin A. Shoemaker, Vahan Simonyan, James S. Song, Paul A. Thiessen, Roxanne A. Yamashita, Jodie J. Yin, Dachuan Zhang, Stephen H. Bryant:
CDD: a Conserved Domain Database for protein classification. Nucleic Acids Res. 33(Database-Issue): 192-196 (2005)

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