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Christina Backes
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2020 – today
- 2021
- [j35]Tobias Fehlmann
, Fabian Kern, Omar Laham, Christina Backes, Jeffrey Solomon, Pascal Hirsch
miRMaster 2.0: multi-species non-coding RNA sequencing analyses at scale. Nucleic Acids Res. 49(Webserver-Issue): 397-408 (2021) - 2020
- [j34]Fabian Kern, Christina Backes, Pascal Hirsch
What's the target: understanding two decades of in silico microRNA-target prediction. Briefings Bioinform. 21(6): 1999-2010 (2020) - [j33]Tim Kehl
miRPathDB 2.0: a novel release of the miRNA Pathway Dictionary Database. Nucleic Acids Res. 48(Database-Issue): D142-D147 (2020) - [j32]Fabian Kern
miRSwitch: detecting microRNA arm shift and switch events. Nucleic Acids Res. 48(Webserver-Issue): W268-W274 (2020) - [j31]Fabian Kern
miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems. Nucleic Acids Res. 48(Webserver-Issue): W521-W528 (2020)
2010 – 2019
- 2019
- [j30]Tobias Fehlmann, Shashwat Sahay
A review of databases predicting the effects of SNPs in miRNA genes or miRNA-binding sites. Briefings Bioinform. 20(3): 1011-1020 (2019) - [j29]Lara Schneider
ClinOmicsTrailbc: a visual analytics tool for breast cancer treatment stratification. Bioinform. 35(24): 5171-5181 (2019) - [j28]Jérémy Amand
DynaVenn: web-based computation of the most significant overlap between ordered sets. BMC Bioinform. 20(1): 743 (2019) - [j27]Valentina Galata
Integrating Culture-based Antibiotic Resistance Profiles with Whole-genome Sequencing Data for 11, 087 Clinical Isolates. Genom. Proteom. Bioinform. 17(2): 169-182 (2019) - [j26]Nicole Ludwig
Machine Learning to Detect Alzheimer's Disease from Circulating Non-coding RNAs. Genom. Proteom. Bioinform. 17(4): 430-440 (2019) - [j25]Valentina Galata
PLSDB: a resource of complete bacterial plasmids. Nucleic Acids Res. 47(Database-Issue): D195-D202 (2019) - 2018
- [j24]Valentina Galata
Comparing genome versus proteome-based identification of clinical bacterial isolates. Briefings Bioinform. 19(3): 495-505 (2018) - [j23]Tobias Fehlmann, Christina Backes
A high-resolution map of the human small non-coding transcriptome. Bioinform. 34(10): 1621-1628 (2018) - [j22]Andreas Keller
Genome-wide MicroRNA Expression Profiles in COPD: Early Predictors for Cancer Development. Genom. Proteom. Bioinform. 16(3): 162-171 (2018) - [j21]Christina Backes, Tobias Fehlmann, Fabian Kern
miRCarta: a central repository for collecting miRNA candidates. Nucleic Acids Res. 46(Database-Issue): D160-D167 (2018) - [j20]Valeria Palmieri, Christina Backes, Nicole Ludwig
IMOTA: an interactive multi-omics tissue atlas for the analysis of human miRNA-target interactions. Nucleic Acids Res. 46(Database-Issue): D770-D775 (2018) - 2017
- [j19]Christina Backes, Tim Kehl
miRPathDB: a new dictionary on microRNAs and target pathways. Nucleic Acids Res. 45(Database-Issue): D90-D96 (2017) - [j18]Tim Kehl
RegulatorTrail: a web service for the identification of key transcriptional regulators. Nucleic Acids Res. 45(Webserver-Issue): W146-W153 (2017) - [j17]Cedric Christian Laczny
BusyBee Web: metagenomic data analysis by bootstrapped supervised binning and annotation. Nucleic Acids Res. 45(Webserver-Issue): W171-W179 (2017) - 2016
- [j16]Daniel Stöckel, Tim Kehl
Multi-omics enrichment analysis using the GeneTrail2 web service. Bioinform. 32(10): 1502-1508 (2016) - [j15]Sabine C. Mueller
BALL-SNPgp - from genetic variants toward computational diagnostics. Bioinform. 32(12): 1888-1890 (2016) - [j14]Alexander Marx
EDISON-WMW: Exact Dynamic Programing Solution of the Wilcoxon-Mann-Whitney Test. Genom. Proteom. Bioinform. 14(1): 55-61 (2016) - [j13]Christina Backes, Qurratulain T. Khaleeq, Eckart Meese, Andreas Keller:
miEAA: microRNA enrichment analysis and annotation. Nucleic Acids Res. 44(Webserver-Issue): W110-W116 (2016) - 2015
- [j12]Sabine C. Mueller
Pathogenicity prediction of non-synonymous single nucleotide variants in dilated cardiomyopathy. Briefings Bioinform. 16(5): 769-779 (2015) - [j11]Sachli Zafari
Regulatory MicroRNA Networks: Complex Patterns of Target Pathways for Disease-related and Housekeeping MicroRNAs. Genom. Proteom. Bioinform. 13(3): 159-168 (2015) - 2013
- [j10]Daniel Stöckel, Oliver Müller, Tim Kehl
NetworkTrail - a web service for identifying and visualizing deregulated subnetworks. Bioinform. 29(13): 1702-1703 (2013) - 2012
- [j9]Cedric Laczny
miRTrail - a comprehensive webserver for analyzing gene and miRNA patterns to enhance the understanding of regulatory mechanisms in diseases. BMC Bioinform. 13: 36 (2012) - [j8]Cord F. Stähler, Andreas Keller
Whole miRNome-wide Differential Co-expression of MicroRNAs. Genom. Proteom. Bioinform. 10(5): 285-294 (2012) - 2010
- [b1]Christina Backes:
Bioinformatics approaches for cancer research. Saarland University, 2010
2000 – 2009
- 2009
- [j7]Andreas Keller
A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis. Bioinform. 25(21): 2787-2794 (2009) - 2008
- [j6]Andreas Keller
GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments. BMC Bioinform. 9 (2008) - 2007
- [j5]Andreas Keller
Computation of significance scores of unweighted Gene Set Enrichment Analyses. BMC Bioinform. 8 (2007) - [j4]Jan Küntzer, Christina Backes, Torsten Blum, Andreas Gerasch, Michael Kaufmann, Oliver Kohlbacher
BNDB - The Biochemical Network Database. BMC Bioinform. 8 (2007) - [j3]Christina Backes, Andreas Keller
GeneTrail - advanced gene set enrichment analysis. Nucleic Acids Res. 35(Web-Server-Issue): 186-192 (2007) - 2006
- [j2]Jan Küntzer, Torsten Blum, Andreas Gerasch, Christina Backes, Andreas Hildebrandt, Michael Kaufmann, Oliver Kohlbacher, Hans-Peter Lenhof:
BN++ - A Biological Information System. J. Integr. Bioinform. 3(2) (2006) - 2005
- [j1]Christina Backes, Jan Küntzer, Hans-Peter Lenhof, Nicole Comtesse, Eckart Meese:
GraBCas: a bioinformatics tool for score-based prediction of Caspase- and Granzyme B-cleavage sites in protein sequences. Nucleic Acids Res. 33(Web-Server-Issue): 208-213 (2005)
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