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Arul M. Chinnaiyan
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2010 – 2019
- 2018
- [j14]Alexander Gawronski, Michael Uhl
, Yajia Zhang, Yen-Yi Lin
MechRNA: prediction of lncRNA mechanisms from RNA-RNA and RNA-protein interactions. Bioinform. 34(18): 3101-3110 (2018) - 2017
- [j13]Dan R. Robinson, Yi-Mi Wu, Robert J. Lonigro, Pankaj Vats
Integrative clinical genomics of metastatic cancer. Nat. 548(7667): 297-303 (2017) - 2016
- [j12]Brendan A. Veeneman, Sudhanshu Shukla
Two-pass alignment improves novel splice junction quantification. Bioinform. 32(1): 43-49 (2016) - 2015
- [j11]Yang Shi, Arul M. Chinnaiyan, Hui Jiang
rSeqNP: a non-parametric approach for detecting differential expression and splicing from RNA-Seq data. Bioinform. 31(13): 2222-2224 (2015) - 2012
- [j10]Shanker Kalyana-Sundaram
Gene Fusion Markup Language: a prototype for exchanging gene fusion data. BMC Bioinform. 13: 269 (2012) - [j9]Brendan A. Veeneman, Matthew K. Iyer, Arul M. Chinnaiyan:
Oculus: faster sequence alignment by streaming read compression. BMC Bioinform. 13: 297 (2012) - 2011
- [j8]Matthew K. Iyer, Arul M. Chinnaiyan, Christopher A. Maher:
ChimeraScan: a tool for identifying chimeric transcription in sequencing data. Bioinform. 27(20): 2903-2904 (2011) - 2010
- [j7]Zhaohui S. Qin
HPeak: an HMM-based algorithm for defining read-enriched regions in ChIP-Seq data. BMC Bioinform. 11: 369 (2010)
2000 – 2009
- 2009
- [j6]You Jung Kim, Nikhil Teletia, Victor Ruotti, Christopher A. Maher, Arul M. Chinnaiyan, Ron M. Stewart, James A. Thomson, Jignesh M. Patel:
ProbeMatch: rapid alignment of oligonucleotides to genome allowing both gaps and mismatches. Bioinform. 25(11): 1424-1425 (2009) - 2007
- [j5]Hyungwon Choi
A Latent Variable Approach for Meta-Analysis of Gene Expression Data from Multiple Microarray Experiments. BMC Bioinform. 8 (2007) - [j4]Jomol P. Mathew, Barry S. Taylor, Gary D. Bader
From Bytes to Bedside: Data Integration and Computational Biology for Translational Cancer Research. PLoS Comput. Biol. 3(2) (2007) - 2006
- [j3]Ronglai Shen, Debashis Ghosh, Arul M. Chinnaiyan, Zhaoling Meng:
Eigengene-based linear discriminant model for tumor classification using gene expression microarray data. Bioinform. 22(21): 2635-2642 (2006) - 2005
- [j2]Robert Kim, Francesca Demichelis
Internet-based profiler system as integrative framework to support translational research. BMC Bioinform. 6: 304 (2005) - 2002
- [j1]Debashis Ghosh, Arul M. Chinnaiyan:
Mixture modelling of gene expression data from microarray experiments. Bioinform. 18(2): 275-286 (2002)
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