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Nathan E. Lewis
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2020 – today
- 2022
- [j13]Dustin Kenefake, Erick Armingol, Nathan E. Lewis
, Efstratios N. Pistikopoulos:
An improved algorithm for flux variability analysis. BMC Bioinform. 23(1): 550 (2022) - [j12]Chintan J. Joshi, Song-Min Schinn, Anne Richelle, Isaac Shamie, Eyleen J. O'Rourke
Correction: StanDep: Capturing transcriptomic variability improves context-specific metabolic models. PLoS Comput. Biol. 18(1) (2022) - [j11]Chintan J. Joshi
What are housekeeping genes? PLoS Comput. Biol. 18(7) (2022) - [j10]Erick Armingol
Inferring a spatial code of cell-cell interactions across a whole animal body. PLoS Comput. Biol. 18(11): 1010715 (2022) - 2020
- [j9]Chintan J. Joshi
StanDep: Capturing transcriptomic variability improves context-specific metabolic models. PLoS Comput. Biol. 16(5) (2020) - [j8]Dongdong Lin, Hima B. Yalamanchili, Xinmin Zhang
CHOmics: A web-based tool for multi-omics data analysis and interactive visualization in CHO cell lines. PLoS Comput. Biol. 16(12) (2020)
2010 – 2019
- 2019
- [j7]Anne Richelle
Increasing consensus of context-specific metabolic models by integrating data-inferred cell functions. PLoS Comput. Biol. 15(4) (2019) - [j6]Anne Richelle
Assessing key decisions for transcriptomic data integration in biochemical networks. PLoS Comput. Biol. 15(7) (2019) - 2018
- [j5]Alyaa M. Abdel-Haleem
Functional interrogation of Plasmodium genus metabolism identifies species- and stage-specific differences in nutrient essentiality and drug targeting. PLoS Comput. Biol. 14(1) (2018) - 2016
- [j4]Zachary A. King, Justin Lu, Andreas Dräger
BiGG Models: A platform for integrating, standardizing and sharing genome-scale models. Nucleic Acids Res. 44(Database-Issue): 515-522 (2016) - 2015
- [j3]Nicolas Rodriguez
JSBML 1.0: providing a smorgasbord of options to encode systems biology models. Bioinform. 31(20): 3383-3386 (2015) - [j2]Zachary A. King, Andreas Dräger
Escher: A Web Application for Building, Sharing, and Embedding Data-Rich Visualizations of Biological Pathways. PLoS Comput. Biol. 11(8) (2015) - 2012
- [b1]Nathan E. Lewis:
Causation in biology : a biomolecular systems view. University of California, San Diego, USA, 2012 - [j1]Elad Noor
A proof for loop-law constraints in stoichiometric metabolic networks. BMC Syst. Biol. 6: 140 (2012)
2000 – 2009
- 2009
- [r1]Nathan E. Lewis, Neema Jamshidi, Ines Thiele, Bernhard O. Palsson:
Metabolic Systems Biology. Encyclopedia of Complexity and Systems Science 2009: 5535-5552
Coauthor Index
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