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Rasmus Nielsen
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2020 – today
- 2022
- [j19]Lenore Pipes
, Rasmus Nielsen
AncestralClust: clustering of divergent nucleotide sequences by ancestral sequence reconstruction using phylogenetic trees. Bioinform. 38(3): 663-670 (2022) - [j18]Sandra Hui
SCONCE: a method for profiling copy number alterations in cancer evolution using single-cell whole genome sequencing. Bioinform. 38(7): 1801-1808 (2022) - [j17]Sandra Hui
SCONCE2: jointly inferring single cell copy number profiles and tumor evolutionary distances. BMC Bioinform. 23(1): 348 (2022) - 2020
- [j16]José Víctor Moreno-Mayar
A likelihood method for estimating present-day human contamination in ancient male samples using low-depth X-chromosome data. Bioinform. 36(3): 828-841 (2020) - [j15]Jingwen Pei
Inferring the ancestry of parents and grandparents from genetic data. PLoS Comput. Biol. 16(8) (2020)
2010 – 2019
- 2017
- [j14]Jade Yu Cheng, Thomas Mailund, Rasmus Nielsen
Fast admixture analysis and population tree estimation for SNP and NGS data. Bioinform. 33(14): 2148-2155 (2017) - 2016
- [j13]Michael Degiorgio, Christian D. Huber, Melissa J. Hubisz
SweepFinder2: increased sensitivity, robustness and flexibility. Bioinform. 32(12): 1895-1897 (2016) - [j12]Filipe G. Vieira
Estimating IBD tracts from low coverage NGS data. Bioinform. 32(14): 2096-2102 (2016) - [j11]Anna-Sapfo Malaspinas
A genomic history of Aboriginal Australia. Nat. 538(7624): 207-214 (2016) - [c4]Elias Z. Tragos, Rasmus Nielsen, Adam Kapovits
Workshop message: IoT-SoS 2016. WoWMoM 2016: 1 - 2015
- [c3]Dan Gusfield, Rasmus Nielsen
Association Mapping for Compound Heterozygous Traits Using Phenotypic Distance and Integer Programming. WABI 2015: 136-147 - 2014
- [j10]Matteo Fumagalli
ngsTools: methods for population genetics analyses from next-generation sequencing data. Bioinform. 30(10): 1486-1487 (2014) - [j9]Anna-Sapfo Malaspinas
bammds: a tool for assessing the ancestry of low-depth whole-genome data using multidimensional scaling (MDS). Bioinform. 30(20): 2962-2964 (2014) - [j8]Thorfinn Korneliussen
ANGSD: Analysis of Next Generation Sequencing Data. BMC Bioinform. 15: 356 (2014) - 2013
- [j7]Thorfinn Sand Korneliussen
Calculation of Tajima's D and other neutrality test statistics from low depth next-generation sequencing data. BMC Bioinform. 14: 289 (2013) - 2011
- [j6]Su Yeon Kim, Kirk E. Lohmueller, Anders Albrechtsen
Estimation of allele frequency and association mapping using next-generation sequencing data. BMC Bioinform. 12: 231 (2011)
2000 – 2009
- 2007
- [j5]Wendy S. W. Wong, Rasmus Nielsen
Finding cis-regulatory modules in Drosophila using phylogenetic hidden Markov models. Bioinform. 23(16): 2031-2037 (2007) - [j4]Thomas L. York
Dependence of paracentric inversion rate on tract length. BMC Bioinform. 8 (2007) - 2006
- [j3]Wendy S. W. Wong, Raazesh Sainudiin, Rasmus Nielsen
Identification of physicochemical selective pressure on protein encoding nucleotide sequences. BMC Bioinform. 7: 148 (2006) - 2005
- [c2]Matthew W. Dimmic, Melissa J. Hubisz
Detecting coevolving amino acid sites using Bayesian mutational mapping. ISMB (Supplement of Bioinformatics) 2005: 126-135 - 2002
- [j2]J. Signorovitch, Rasmus Nielsen:
PATRI-paternity inference using genetic data. Bioinform. 18(2): 341-342 (2002) - [j1]Thomas L. York
Bayesian Estimation of the Number of Inversions in the History of Two Chromosomes. J. Comput. Biol. 9(6): 805-818 (2002) - [c1]Rasmus Nielsen, John P. Huelsenbeck:
Detecting Positively Selected Amino Acid Sites Using Posterior Predictive P-Values. Pacific Symposium on Biocomputing 2002: 576-588
Coauthor Index
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