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Marco Mesiti
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2020 – today
- 2024
- [c71]Darya Shlyk, Tudor Groza, Marco Mesiti, Stefano Montanelli, Emanuele Cavalleri:
REAL: A Retrieval-Augmented Entity Linking Approach for Biomedical Concept Recognition. BioNLP@ACL 2024: 380-389 - [c70]Marco Nicolini
, Dario Malchiodi, Alberto Cabri
Fine-Tuning of Conditional Transformers Improves the Generation of Functionally Characterized Proteins. BIOSTEC (1) 2024: 561-568 - [c69]Emanuele Cavalleri, Marco Mesiti:
On the Extraction of Meaningful RNA Interactions from Scientific Publications through LLMs and SPIRES. EDBT/ICDT Workshops 2024 - [c68]Emanuele Cavalleri, Marco Mesiti:
Construction and Enhancement of an RNA-Based Knowledge Graph for Discovering New RNA Drugs. ICDE 2024: 5639-5643 - [c67]Emanuele Cavalleri, Mauricio Soto Gomez, Ali Pashaeibarough, Dario Malchiodi, J. Harry Caufield, Justin T. Reese, Christopher J. Mungall, Peter N. Robinson, Elena Casiraghi, Giorgio Valentini, Marco Mesiti:
Initial achievements in relation extraction from RNA-focused scientific papers. SEBD 2024: 61-69 - [c66]Emanuele Cavalleri, Mauricio Soto Gomez, Ali Pashaeibarough, Dario Malchiodi, J. Harry Caufield, Justin T. Reese, Chris Mungall, Peter N. Robinson, Elena Casiraghi, Giorgio Valentini, Marco Mesiti:
SPIREX: Improving LLM-based relation extraction from RNA-focused scientific literature using graph machine learning. VLDB Workshops 2024 - 2023
- [j23]Marco Mesiti
Indexing Structures for the Efficient Multi-Resolution Visualization of Big Graphs. IEEE Access 11: 103585-103600 (2023) - [j22]Giorgio Valentini
The promises of large language models for protein design and modeling. Frontiers Bioinform. 3 (2023) - [c65]Sara Bonfitto, Paolo Perlasca, Marco Mesiti:
Easy-to-use Interfaces for Supporting the Semantic Annotation of Web Tables. EDBT/ICDT Workshops 2023 - [c64]Emanuele Cavalleri
A Meta-Graph for the Construction of an RNA-Centered Knowledge Graph. IWBBIO (1) 2023: 165-180 - [c63]Emanuele Cavalleri, Sara Bonfitto, Alberto Cabri, Jessica Gliozzo, Paolo Perlasca, Mauricio Soto Gomez, Gabriella Trucco, Elena Casiraghi, Giorgio Valentini, Marco Mesiti:
Towards the Construction of an RNA-centered Knowledge Graph. SEBD 2023: 173-180 - [i3]Tiffany J. Callahan, Ignacio J. Tripodi, Adrianne L. Stefanski, Luca Cappelletti, Sanya Bathla Taneja, Jordan M. Wyrwa, Elena Casiraghi
An Open-Source Knowledge Graph Ecosystem for the Life Sciences. CoRR abs/2307.05727 (2023) - [i2]Emanuele Cavalleri
RNA-KG: An ontology-based knowledge graph for representing interactions involving RNA molecules. CoRR abs/2312.00183 (2023) - 2022
- [j21]Jessica Gliozzo
Heterogeneous data integration methods for patient similarity networks. Briefings Bioinform. 23(4) (2022) - [c62]Paolo Perlasca
Integration and Visual Analysis of Biomolecular Networks Through UNIPred-Web. ICWE Workshops 2022: 192-197 - 2021
- [j20]Sara Bonfitto
Table understanding approaches for extracting knowledge from heterogeneous tables. WIREs Data Mining Knowl. Discov. 11(4) (2021) - [c61]Sara Bonfitto, Luca Cappelletti, Elena Casiraghi, Paolo Perlasca, Fabrizio Trovato, Giorgio Valentini, Marco Mesiti:
A Web Tool for the Semantic Integration of Heterogeneous and Complex Spreadsheet Tables. SEBD 2021: 116-127 - [c60]Sara Bonfitto
Semi-automatic Column Type Inference for CSV Table Understanding. SOFSEM 2021: 535-549 - 2020
- [i1]Mario Pennacchioni, Emanuele Munarini, Marco Mesiti:
The Sum Composition Problem. CoRR abs/2002.02476 (2020)
2010 – 2019
- 2019
- [j19]Stefano Valtolina, Luca Ferrari
Ontology-Based Consistent Specification of Sensor Data Acquisition Plans in Cross-Domain IoT Platforms. IEEE Access 7: 176141-176169 (2019) - [j18]Paolo Perlasca, Marco Frasca
UNIPred-Web: a web tool for the integration and visualization of biomolecular networks for protein function prediction. BMC Bioinform. 20(1): 422:1-422:19 (2019) - [c59]Luca Cappelletti
On the Quality of Classification Models for Inferring ABAC Policies from Access Logs. IEEE BigData 2019: 4000-4007 - [c58]Sara Bonfitto, Fatima Hachem
On the Bulk Ingestion of IoT Devices from Heterogeneous IoT Brokers. ICIOT 2019: 189-195 - [c57]Stefano Valtolina, Fatmeh Hachem
Facilitating the Development of IoT Applications in Smart City Platforms. IS-EUD 2019: 83-99 - 2018
- [j17]Marco Frasca
A GPU-based algorithm for fast node label learning in large and unbalanced biomolecular networks. BMC Bioinform. 19-S(10): 269-280 (2018) - [j16]Pierfrancesco Bellini, Marco Mesiti, Paolo Nesi, Paolo Perlasca
Protection and composition of crossmedia content in collaborative environments. Multim. Tools Appl. 77(2): 2083-2114 (2018) - [c56]Cheick Tidiane Ba
A Graphical Tool for the Exploration and Visual Analysis of Biomolecular Networks. CIBB 2018: 88-98 - [c55]Claudio Badii
Snap4City: A Scalable IOT/IOE Platform for Developing Smart City Applications. SmartWorld/SCALCOM/UIC/ATC/CBDCom/IOP/SCI 2018: 2109-2116 - [c54]Luca Ferrari, Stefano Valtolina, Marco Mesiti:
Developing IoT Spark-Streaming Applications by Means of StreamLoader. UNet 2018: 116-127 - 2017
- [c53]Marco Frasca
Disease-Genes Must Guide Data Source Integration in the Gene Prioritization Process. CIBB 2017: 60-69 - [c52]Marco Notaro
Ensembling Descendant Term Classifiers to Improve Gene - Abnormal Phenotype Predictions. CIBB 2017: 70-80 - 2016
- [j15]Giorgio Valentini
RANKS: a flexible tool for node label ranking and classification in biological networks. Bioinform. 32(18): 2872-2874 (2016) - [c51]Jianyi Lin
Within network learning on big graphs using secondary memory-based random walk kernels. COMPLEX NETWORKS 2016: 235-245 - [c50]Marco Mesiti, Luca Ferrari, Stefano Valtolina, Giacomo Licari, Gian Luca Galliani, Minh-Son Dao, Koji Zettsu:
streamLoader: An Event-Driven ETL System for the On-line Processing of Heterogeneous Sensor Data. EDBT 2016: 628-631 - [c49]Luca Ferrari, Marco Mesiti, Stefano Valtolina:
Soundness and Ontology-Based Consistency of Sensor Data Acquisition Plans. EKAW (Satellite Events) 2016: 109-113 - [c48]Paolo Perlasca
Multi-species protein function prediction: towards web-based visual analytics. iiWAS 2016: 489-493 - [p2]Bruno Apolloni, Simone Bassis, Marco Mesiti, Stefano Valtolina, Francesco Epifania:
A Rule Based Recommender System. Advances in Neural Networks 2016: 87-96 - 2015
- [c47]Stefano Valtolina, Barbara Rita Barricelli, Marco Mesiti:
End-User Centered Events Detection and Management in the Internet of Things. ICWE Workshops 2015: 77-90 - [c46]Marco Mesiti:
MergeGraphs: a web-based system for merging heterogeneous big graphs. iiWAS 2015: 1:1-1:10 - [c45]Stefano Valtolina, Marco Mesiti, Luca Ferrari, Koji Zettsu, Minh-Son Dao:
User-Centered Event Data Modelling and Analytics. CoPDA@IS-EUD 2015: 52-58 - [c44]Marco Mesiti, Stefano Valtolina, Luca Ferrari, Minh-Son Dao, Koji Zettsu:
An editable live ETL system for Ambient Intelligence environments. WF-IoT 2015: 393-394 - 2014
- [j14]Horacio Caniza, Alfonso E. Romero
GOssTo: a stand-alone application and a web tool for calculating semantic similarities on the Gene Ontology. Bioinform. 30(15): 2235-2236 (2014) - [j13]Federico Cavalieri, Giovanna Guerrini, Marco Mesiti:
XSPath: Navigation on XML Schemas Made Easy. IEEE Trans. Knowl. Data Eng. 26(2): 485-499 (2014) - [c43]Marco Mesiti, Stefano Valtolina:
Towards a User-Friendly Loading System for the Analysis of Big Data in the Internet of Things. COMPSAC Workshops 2014: 312-317 - [c42]Marco Mesiti, Stefano Valtolina, Simone Bassis, Francesco Epifania, Bruno Apolloni:
e-Teaching Assistant - A Social Intelligent Platform Supporting Teachers in the Collaborative Creation of Courses. CSEDU (1) 2014: 569-575 - [c41]Stefano Valtolina, Marco Mesiti, Francesco Epifania, Bruno Apolloni:
Towards a social e-learning platform for demanding users. EDUCON 2014: 1028-1031 - 2013
- [c40]Marco Mesiti, Paolo Perlasca
On the Composition of Digital Licenses in Collaborative Environments. DEXA (1) 2013: 428-442 - 2012
- [j12]Stefano Valtolina, Barbara Rita Barricelli, Marco Mesiti, Marina Ribaudo:
User-Centered Design of E-Learning Tools for Users with Special Needs: The VisualPedia Case Study. IxD&A 13-14: 47-55 (2012) - [j11]Matteo Re
A Fast Ranking Algorithm for Predicting Gene Functions in Biomolecular Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 9(6): 1812-1818 (2012) - 2011
- [j10]Alsayed Algergawy
XML data clustering: An overview. ACM Comput. Surv. 43(4): 25:1-25:41 (2011) - [c39]Federico Cavalieri, Giovanna Guerrini, Marco Mesiti:
Reverting the Effects of XQuery Update Expressions. BNCOD 2011: 167-181 - [c38]Federico Cavalieri, Giovanna Guerrini, Marco Mesiti:
Dynamic reasoning on XML updates. EDBT 2011: 165-176 - [c37]Federico Cavalieri, Giovanna Guerrini, Marco Mesiti, Barbara Oliboni
On the reduction of sequences of XML document and schema update operations. ICDE Workshops 2011: 77-86 - [c36]Federico Cavalieri, Giovanna Guerrini, Marco Mesiti:
Updates on XML documents and schemas. ICDE Workshops 2011: 308-311 - [c35]Federico Cavalieri, Giovanna Guerrini, Marco Mesiti:
Updating XML schemas and associated documents through exup. ICDE 2011: 1320-1323 - [c34]Federico Cavalieri, Giovanna Guerrini, Marco Mesiti:
Handling XML Updates in Distributed Contexts. SEBD 2011: 259-266 - [p1]Marco Mesiti, Marina Ribaudo, Stefano Valtolina, Barbara Rita Barricelli, Patrizia Boccacci, Silvia Dini:
Collaborative Environments: Accessibility and Usability for Users with Special Needs. Community-Built Databases 2011: 319-340 - 2010
- [j9]Michael Benedikt
Report on the EDBT/ICDT 2010 workshop on updates in XML. SIGMOD Rec. 39(1): 54-57 (2010) - [c33]Andrea Bozza, Marco Mesiti, Stefano Valtolina, Silvia Dini, Marina Ribaudo:
Accessibility and Usability of a Collaborative e-Learning Application. CSEDU (1) 2010: 102-109 - [e4]Florian Daniel, Lois M. L. Delcambre, Farshad Fotouhi, Irene Garrigós, Giovanna Guerrini, Jose-Norberto Mazón, Marco Mesiti, Sascha Müller, Juan Trujillo, Traian Marius Truta, Bernhard Volz, Emmanuel Waller, Li Xiong, Esteban Zimányi:
Proceedings of the 2010 EDBT/ICDT Workshops, Lausanne, Switzerland, March 22-26, 2010. ACM International Conference Proceeding Series, ACM 2010, ISBN 978-1-60558-990-9 [contents]
2000 – 2009
- 2009
- [j8]Marco Mesiti, Ernesto Jiménez-Ruiz
XML-based approaches for the integration of heterogeneous bio-molecular data. BMC Bioinform. 10(S-12): 7 (2009) - [c32]Roald Lengu, Paolo Missier
Time-completeness trade-offs in record linkage using adaptive query processing. EDBT 2009: 851-861 - [c31]Patrizia Boccacci, Marina Ribaudo, Marco Mesiti:
A Collaborative Environment for the Design of Accessible Educational Objects. Web Intelligence/IAT Workshops 2009: 207-210 - [c30]Paolo Missier, Alvaro A. A. Fernandes, Roald Lengu, Giovanna Guerrini, Marco Mesiti:
Data Quality support to on-the-fly data integration using Adaptive Query Processing. SEBD 2009: 213-220 - [e3]Marco Mesiti, Traian Marius Truta, Li Xiong, Sascha Müller, Hubert Naacke, Boris Novikov, Guillaume Raschia, Ismael Sanz, Pierre Sens, Dmitry Shaporenkov, Nicolas Travers:
Proceedings of the 2009 EDBT/ICDT Workshops, Saint-Petersburg, Russia, March 22, 2009. ACM International Conference Proceeding Series 360, ACM 2009, ISBN 978-1-60558-650-2 [contents] - 2008
- [j7]Ismael Sanz
Fragment-based approximate retrieval in highly heterogeneous XML collections. Data Knowl. Eng. 64(1): 266-293 (2008) - [j6]Elisa Bertino, Giovanna Guerrini, Marco Mesiti:
Measuring the structural similarity among XML documents and DTDs. J. Intell. Inf. Syst. 30(1): 55-92 (2008) - [c29]Federico Cavalieri, Giovanna Guerrini, Marco Mesiti:
Navigational Path Expressions on XML Schemas. DEXA 2008: 718-726 - [c28]Ismael Sanz
An Entropy-Based Characterization of the Heterogeneity of XML Collections. DEXA Workshops 2008: 238-242 - [c27]Giovanna Guerrini, Marco Mesiti:
X-Evolution: A Comprehensive Approach for XML Schema Evolution. DEXA Workshops 2008: 251-255 - [c26]Ismael Sanz, Marco Mesiti, Giovanna Guerrini, Rafael Berlanga Llavori:
ArHeX: A Framework for Approximate Retrieval in Heterogeneous. SEBD 2008: 414-421 - 2007
- [c25]Ismael Sanz
ArHeX: Flexible Composition of Indexes and Similarity Measures for XML. ICDE Workshops 2007: 281-284 - [c24]Giovanna Guerrini, Marco Mesiti, Matteo Alberto Sorrenti:
XML Schema Evolution: Incremental Validation and Efficient Document Adaptation. XSym 2007: 92-106 - 2006
- [c23]Marco Mesiti, Roberto Celle, Matteo Alberto Sorrenti, Giovanna Guerrini:
X-Evolution: A System for XML Schema Evolution and Document Adaptation. EDBT 2006: 1143-1146 - [c22]Ismael Sanz
ArHeX: An Approximate Retrieval System for Highly Heterogeneous XML Document Collections. EDBT 2006: 1186-1189 - [c21]Ismael Sanz
Highly Heterogeneous XML Collections: How to Retrieve Precise Results?. FQAS 2006: 232-244 - [e2]Torsten Grust, Hagen Höpfner, Arantza Illarramendi, Stefan Jablonski, Marco Mesiti, Sascha Müller, Paula-Lavinia Patranjan, Kai-Uwe Sattler, Myra Spiliopoulou, Jef Wijsen:
Current Trends in Database Technology - EDBT 2006, EDBT 2006 Workshops PhD, DataX, IIDB, IIHA, ICSNW, QLQP, PIM, PaRMA, and Reactivity on the Web, Munich, Germany, March 26-31, 2006, Revised Selected Papers. Lecture Notes in Computer Science 4254, Springer 2006, ISBN 3-540-46788-2 [contents] - 2005
- [c20]Giovanna Guerrini, Viviana Mascardi, Marco Mesiti:
A Semantic Information Retrieval Advertisement and Policy Based System for a P2P Network. DBISP2P 2005: 147-154 - [c19]Giovanna Guerrini, Marco Mesiti, Daniele Rossi:
Impact of XML schema evolution on valid documents. WIDM 2005: 39-44 - [c18]Ismael Sanz, Marco Mesiti, Giovanna Guerrini, Rafael Berlanga Llavori:
Approximate Subtree Identification in Heterogeneous XML Documents Collections. XSym 2005: 192-206 - 2004
- [j5]Elisa Bertino, Giovanna Guerrini, Marco Mesiti:
A matching algorithm for measuring the structural similarity between an XML document and a DTD and its applications. Inf. Syst. 29(1): 23-46 (2004) - [j4]Elena Camossi
Handling Expiration of Multigranular Temporal Objects. J. Log. Comput. 14(1): 23-50 (2004) - [j3]Marco Mesiti, Barbara Catania, Giovanna Guerrini, Akmal B. Chaudhri:
EDBT04 Workshop on Database Technologies for Handling XML Information on the Web. SIGMOD Rec. 33(2): 132-134 (2004) - [c17]Minos N. Garofalakis, Ioana Manolescu, Marco Mesiti, George A. Mihaila, Ralf Schenkel, Bhavani Thuraisingham, Vasilis Vassalos:
What's Next in XML and Databases? EDBT Workshops 2004: 318-324 - [c16]Elisa Bertino, Giovanna Guerrini, Marco Mesiti:
DiXeminator: A Profile-Based Selective Dissemination System for XML Documents. EDBT Workshops 2004: 578-587 - [c15]Elisa Bertino, Marco Mesiti, Munir Cochinwala:
A Trigger-Based Approach for Communication Personalization. IDEAS 2004: 3-13 - [c14]Elisa Bertino, Giovanna Guerrini, Marco Mesiti:
Exploiting User-Profiles for the Selective Dissemination of XML Documents. SEBD 2004: 334-341 - [e1]Wolfgang Lindner, Marco Mesiti, Can Türker, Yannis Tzitzikas
Current Trends in Database Technology - EDBT 2004 Workshops, EDBT 2004 Workshops PhD, DataX, PIM, P2P&DB, and ClustWeb, Heraklion, Crete, Greece, March 14-18, 2004, Revised Selected Papers. Lecture Notes in Computer Science 3268, Springer 2004, ISBN 3-540-23305-9 [contents] - 2003
- [b1]Marco Mesiti:
A structural similarity measure for XML documents. University of Genoa, Italy, 2003 - [c13]Davide Buscaldi, Giovanna Guerrini, Marco Mesiti, Paolo Rosso:
Tag semantics for the retrieval of XML documents. ISICT 2003: 273-278 - [c12]Marco Mesiti, Elisa Bertino, Giovanna Guerrini:
An abstraction-based approach to measuring the structural similarity between two unordered XML documents. ISICT 2003: 316-321 - [c11]Elisa Bertino, Stefano Franzoni, Marco Mesiti:
Memorizzazione di regole per l'instradamento di messaggi in un sistema di comunicazione universale. SEBD 2003: 245-256 - 2002
- [j2]Elisa Bertino, Silvana Castano
Protection and administration of XML data sources. Data Knowl. Eng. 43(3): 237-260 (2002) - [c10]Marco Mesiti:
Classification and Querying of XML Documents. EDBT PhD Workshop 2002: 123-126 - [c9]Elisa Bertino, Giovanna Guerrini, Marco Mesiti, Luigi Tosetto:
Evolving a Set of DTDs According to a Dynamic Set of XML Documents. EDBT Workshops 2002: 45-66 - [c8]Elisa Bertino, Giovanna Guerrini, Marco Mesiti:
Matching an XML Document against a Set of DTDs. ISMIS 2002: 412-422 - [c7]Elisa Bertino, Munir Cochinwala, Marco Mesiti:
UCS-Router: A Policy Engine for Enforcing Message Routing Rules in a Universal Communication System. Mobile Data Management 2002: 8-16 - [c6]Elena Camossi
Evolution Specification of Multigranular Temporal Objects. TIME 2002: 78-85 - 2000
- [j1]Elisa Bertino, Silvana Castano, Elena Ferrari, Marco Mesiti:
Specifying and enforcing access control policies for XML document sources. World Wide Web 3(3): 139-151 (2000) - [c5]Elisa Bertino, M. Braun, Silvana Castano, Elena Ferrari, Marco Mesiti:
Author-X: A Java-Based System for XML Data Protection. DBSec 2000: 15-26 - [c4]Chung-Min Chen, Munir Cochinwala, Claudio Petrone, Marc Pucci, Sunil Samtani, Patrizia Santa, Marco Mesiti:
Internet Traffic Warehouse. SIGMOD Conference 2000: 550-558
1990 – 1999
- 1999
- [c3]Elisa Bertino, Giovanna Guerrini, Isabella Merlo, Marco Mesiti:
An Approach to Classify Semi-structured Objects. ECOOP 1999: 416-440 - [c2]Giovanna Guerrini, Isabella Merlo, Marco Mesiti:
Handling Semi-Structured Data through an Extended Object-Oriented Data Model. SEBD 1999: 197-211 - [c1]Elisa Bertino, Silvana Castano
Controlled Access and Dissemination of XML Documents. Workshop on Web Information and Data Management 1999: 22-27
Coauthor Index
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