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Neuroinformatics, Volume 19
Volume 19, Number 1, January 2021
- Wieslaw L. Nowinski
:
Evolution of Human Brain Atlases in Terms of Content, Applications, Functionality, and Availability. 1-22 - Xinbo Wang, Qing Wang, Peiwen Zhang, Shufang Qian, Shiyu Liu, Dong-Qiang Liu:
Reducing Inter-Site Variability for Fluctuation Amplitude Metrics in Multisite Resting State BOLD-fMRI Data. 23-38 - Jeong Hwan Kook, Kelly A. Vaughn, Dana M. DeMaster, Linda Ewing-Cobbs, Marina Vannucci
BVAR-Connect: A Variational Bayes Approach to Multi-Subject Vector Autoregressive Models for Inference on Brain Connectivity Networks. 39-56 - Junhao Wen
Reproducible Evaluation of Diffusion MRI Features for Automatic Classification of Patients with Alzheimer's Disease. 57-78 - Bingye Lei
NEURO-LEARN: a Solution for Collaborative Pattern Analysis of Neuroimaging Data. 79-91 - Sylvain Chevallier
Review of Riemannian Distances and Divergences, Applied to SSVEP-based BCI. 93-106 - Krzysztof Rykaczewski, Jan Nikadon, Wlodzislaw Duch
supFunSim: Spatial Filtering Toolbox for EEG. 107-125 - Andrew Beers, James M. Brown
DeepNeuro: an open-source deep learning toolbox for neuroimaging. 127-140 - Jasper Wouters
SHYBRID: A Graphical Tool for Generating Hybrid Ground-Truth Spiking Data for Evaluating Spike Sorting Performance. 141-158 - Sebastian R. van der Voort
DeepDicomSort: An Automatic Sorting Algorithm for Brain Magnetic Resonance Imaging Data. 159-184 - Alessio Paolo Buccino
MEArec: A Fast and Customizable Testbench Simulator for Ground-truth Extracellular Spiking Activity. 185-204
Volume 19, Number 2, April 2021
- Ittai Shamir
An MRI-Based, Data-Driven Model of Cortical Laminar Connectivity. 205-218 - Xuyu Cao, Chen Chen, Lixia Tian
Supervised Multidimensional Scaling and its Application in MRI-Based Individual Age Predictions. 219-231 - Minjeong Kim
Constructing Connectome Atlas by Graph Laplacian Learning. 233-249 - Roberto Guarnieri
RT-NET: real-time reconstruction of neural activity using high-density electroencephalography. 251-266 - Hong Ni, Zhao Feng, Yue Guan, Xueyan Jia, Wu Chen, Tao Jiang, Qiuyuan Zhong
DeepMapi: a Fully Automatic Registration Method for Mesoscopic Optical Brain Images Using Convolutional Neural Networks. 267-284 - Lu Zhao, Ishaan Batta, William Matloff, Caroline O'Driscoll, Samuel Hobel, Arthur W. Toga
Neuroimaging PheWAS (Phenome-Wide Association Study): A Free Cloud-Computing Platform for Big-Data, Brain-Wide Imaging Association Studies. 285-303 - Hang Zhou
GTree: an Open-source Tool for Dense Reconstruction of Brain-wide Neuronal Population. 305-317 - Gabriela J. Jurkiewicz
Addressing Pitfalls in Phase-Amplitude Coupling Analysis with an Extended Modulation Index Toolbox. 319-345 - Andrei Irimia
Cross-Sectional Volumes and Trajectories of the Human Brain, Gray Matter, White Matter and Cerebrospinal Fluid in 9473 Typically Aging Adults. 347-366 - Ryan P. Cabeen
Tractography Processing with the Sparse Closest Point Transform. 367-378 - Baris Kanber
Musclesense: a Trained, Artificial Neural Network for the Anatomical Segmentation of Lower Limb Magnetic Resonance Images in Neuromuscular Diseases. 379-383
Volume 19, Number 3, July 2021
- Holger Mohr
Fast Estimation of L1-Regularized Linear Models in the Mass-Univariate Setting. 385-392 - Hua Zhang, Jiajie Mo
Deep Learning Model for the Automated Detection and Histopathological Prediction of Meningioma. 393-402 - Matthew F. Sharrock, W. Andrew Mould, Hasan Ali, Meghan Hildreth, Issam A. Awad, Daniel F. Hanley
3D Deep Neural Network Segmentation of Intracerebral Hemorrhage: Development and Validation for Clinical Trials. 403-415 - Muhammad Yousefnezhad
Deep Representational Similarity Learning for Analyzing Neural Signatures in Task-based fMRI Dataset. 417-431 - Johanna Perens
An Optimized Mouse Brain Atlas for Automated Mapping and Quantification of Neuronal Activity Using iDISCO+ and Light Sheet Fluorescence Microscopy. 433-446 - Colin B. Hansen, Qi Yang, Ilwoo Lyu, Francois Rheault, Cailey I. Kerley, Bramsh Qamar Chandio, Shreyas Fadnavis, Owen A. Williams, Andrea T. Shafer, Susan M. Resnick, David H. Zald, Laurie E. Cutting, Warren D. Taylor, Brian D. Boyd, Eleftherios Garyfallidis, Adam W. Anderson, Maxime Descoteaux, Bennett A. Landman, Kurt G. Schilling
Pandora: 4-D White Matter Bundle Population-Based Atlases Derived from Diffusion MRI Fiber Tractography. 447-460 - Jan Sosulski, Jan-Philipp Kemmer, Michael Tangermann:
Improving Covariance Matrices Derived from Tiny Training Datasets for the Classification of Event-Related Potentials with Linear Discriminant Analysis. 461-476 - José Bernal
Generating Longitudinal Atrophy Evaluation Datasets on Brain Magnetic Resonance Images Using Convolutional Neural Networks and Segmentation Priors. 477-492 - Espen Hagen
RippleNet: a Recurrent Neural Network for Sharp Wave Ripple (SPW-R) Detection. 493-514 - Rong Chen
Causal Network Inference for Neural Ensemble Activity. 515-527 - Zhu-Qing Gong, Peng Gao
DREAM. 529-545 - Mohamed Amine Boudiaf, Moncef Benkherrat
Automatic Denoising of Single-Trial Event-Related Potentials. 547-550
Volume 19, Number 4, October 2021
- Giorgio A. Ascoli
Farewell, Neuroinformatics! 551-552 - Harshvardhan Gazula, Bharath Holla
Decentralized Multisite VBM Analysis During Adolescence Shows Structural Changes Linked to Age, Body Mass Index, and Smoking: a COINSTAC Analysis. 553-566 - Joaquim Massana
Signaleeg. 567-583 - Gaia Amaranta Taberna
Automated Head Tissue Modelling Based on Structural Magnetic Resonance Images for Electroencephalographic Source Reconstruction. 585-596 - Emmanuel E. Ntiri, Melissa F. Holmes, Parisa Mojiri Forooshani, Joel Ramirez, Fuqiang Gao, Miracle Ozzoude
Improved Segmentation of the Intracranial and Ventricular Volumes in Populations with Cerebrovascular Lesions and Atrophy Using 3D CNNs. 597-618 - Victor Nozais
Deep Learning-based Classification of Resting-state fMRI Independent-component Analysis. 619-637 - Nicolas Roehri
Transfer, Collection and Organisation of Electrophysiological and Imaging Data for Multicentre Studies. 639-647 - Nestor Timonidis
Uncovering Statistical Links Between Gene Expression and Structural Connectivity Patterns in the Mouse Brain. 649-667 - Chen-zhi Su, Kuan-Ting Chou, Hsuan-Pei Huang, Chiau-Jou Li, Ching-Che Charng, Chung-Chuan Lo, Daw-Wei Wang
Identification of Neuronal Polarity by Node-Based Machine Learning. 669-684 - Johannes Hjorth
Predicting Synaptic Connectivity for Large-Scale Microcircuit Simulations Using Snudda. 685-701 - Carolee Nguyen
Comparing Automated Morphology Quantification Software on Dendrites of Uninjured and Injured Drosophila Neurons. 703-717 - Gorana Mijatovic
A Measure of Concurrent Neural Firing Activity Based on Mutual Information. 719-735 - Michiel Van Dyck, Rajiv K. Mishra
High-throughput Analysis of Synaptic Activity in Electrically Stimulated Neuronal Cultures. 737-750
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