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Roberto Barbuti
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- affiliation: University of Pisa, Italy
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2020 – today
- 2021
- [j58]Roberto Barbuti, Pasquale Bove, Roberta Gori, Damas P. Gruska
, Francesca Levi, Paolo Milazzo
Encoding Threshold Boolean Networks into Reaction Systems for the Analysis of Gene Regulatory Networks. Fundam. Informaticae 179(2): 205-225 (2021) - [j57]Roberto Barbuti, Anna Bernasconi, Roberta Gori, Paolo Milazzo:
Characterization and computation of ancestors in reaction systems. Soft Comput. 25(3): 1683-1698 (2021) - [j56]Roberto Barbuti, Roberta Gori, Paolo Milazzo
Encoding Boolean networks into reaction systems for investigating causal dependencies in gene regulation. Theor. Comput. Sci. 881: 3-24 (2021) - 2020
- [j55]Roberto Barbuti, Roberta Gori, Paolo Milazzo
A survey of gene regulatory networks modelling methods: from differential equations, to Boolean and qualitative bioinspired models. J. Membr. Comput. 2(3): 207-226 (2020)
2010 – 2019
- 2018
- [j54]Roberto Barbuti, Roberta Gori, Francesca Levi, Paolo Milazzo:
Generalized contexts for reaction systems: definition and study of dynamic causalities. Acta Informatica 55(3): 227-267 (2018) - [j53]Roberto Barbuti, Roberta Gori, Paolo Milazzo:
Predictors for flat membrane systems. Theor. Comput. Sci. 736: 79-102 (2018) - [c44]Roberto Barbuti, Pasquale Bove, Roberta Gori, Francesca Levi, Paolo Milazzo:
Simulating Gene Regulatory Networks using Reaction Systems. CS&P 2018 - [c43]Roberto Barbuti, Anna Bernasconi, Roberta Gori, Paolo Milazzo:
Computing Preimages and Ancestors in Reaction Systems. TPNC 2018: 23-35 - 2017
- [c42]Roberto Barbuti, Roberta Gori, Paolo Milazzo
Multiset Patterns and Their Application to Dynamic Causalities in Membrane Systems. Int. Conf. on Membrane Computing 2017: 54-73 - 2016
- [j52]Roberto Barbuti, Roberta Gori, Francesca Levi, Paolo Milazzo
Specialized Predictor for Reaction Systems with Context Properties. Fundam. Informaticae 147(2-3): 173-191 (2016) - [j51]Roberto Barbuti, Roberta Gori, Francesca Levi, Paolo Milazzo
Investigating dynamic causalities in reaction systems. Theor. Comput. Sci. 623: 114-145 (2016) - [c41]Roberto Barbuti, Pasquale Bove, Paolo Milazzo
Applications of P Systems in Population Biology and Ecology: The Cases of MPP and APP Systems. Int. Conf. on Membrane Computing 2016: 28-48 - 2015
- [j50]Roberto Barbuti, Pasquale Bove
Minimal probabilistic P systems for modelling ecological systems. Theor. Comput. Sci. 608: 36-56 (2015) - [c40]Roberto Barbuti, Roberta Gori, Francesca Levi, Paolo Milazzo:
Specialized Predictor for Reaction Systems with Context Properties. CS&P 2015: 31-43 - [c39]Roberto Barbuti, Alessandro Bompadre, Pasquale Bove
Attributed Probabilistic P Systems and Their Application to the Modelling of Social Interactions in Primates. SEFM Workshops 2015: 176-191 - 2014
- [j49]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo
Simulation of Spatial P system models. Theor. Comput. Sci. 529: 11-45 (2014) - [j48]Giovanni Pardini
Compositional semantics and behavioural equivalences for reaction systems with restriction. Theor. Comput. Sci. 551: 1-21 (2014) - [c38]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo
Systolic Automata and P Systems. Computing with New Resources 2014: 17-31 - [c37]Sheema Sameen, Roberto Barbuti, Paolo Milazzo
A Mathematical Model for Assessing KRAS Mutation Effect on Monoclonal Antibody Treatment of Colorectal Cancer. SEFM Workshops 2014: 243-258 - 2013
- [c36]Giovanni Pardini, Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Simone Tini
A Compositional Semantics of Reaction Systems with Restriction. CiE 2013: 330-339 - [c35]Roberto Barbuti, Pasquale Bove
A Computational Formal Model of the Invasiveness of Eastern Species in European Water Frog Populations. SEFM Workshops 2013: 329-344 - 2012
- [j47]Giulio Caravagna
Fine-tuning anti-tumor immunotherapies via stochastic simulations. BMC Bioinform. 13(S-4): S8 (2012) - [j46]Roberto Barbuti, Francesca Levi, Paolo Milazzo, Guido Scatena
Probabilistic model checking of biological systems with uncertain kinetic rates. Theor. Comput. Sci. 419: 2-16 (2012) - [j45]Roberto Barbuti, Giulio Caravagna
Foundational aspects of multiscale modeling of biological systems with process algebras. Theor. Comput. Sci. 431: 96-116 (2012) - [c34]Roberto Barbuti, Antonio Cerone, Andrea Maggiolo-Schettini, Paolo Milazzo
Modelling Population Dynamics Using Grid Systems. SEFM Satellite Events 2012: 172-189 - 2011
- [j44]Roberto Barbuti, Francesca Levi, Paolo Milazzo, Guido Scatena
Maximally Parallel Probabilistic Semantics for Multiset Rewriting. Fundam. Informaticae 112(1): 1-17 (2011) - [j43]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Simone Tini
An Overview on Operational Semantics in Membrane Computing. Int. J. Found. Comput. Sci. 22(1): 119-131 (2011) - [j42]Roberto Barbuti, Giuditta Franco
Foreword. Nat. Comput. 10(1): 1-2 (2011) - [j41]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Giovanni Pardini
Spatial P systems. Nat. Comput. 10(1): 3-16 (2011) - [j40]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Giovanni Pardini
Spatial Calculus of Looping Sequences. Theor. Comput. Sci. 412(43): 5976-6001 (2011) - [j39]Roberto Barbuti, Giulio Caravagna
Delay Stochastic Simulation of Biological Systems: A Purely Delayed Approach. Trans. Comp. Sys. Biology 13: 61-84 (2011) - [i2]Roberto Barbuti, Diletta Romana Cacciagrano, Andrea Maggiolo-Schettini, Paolo Milazzo, Luca Tesei:
A Testing Framework for P Systems. CoRR abs/1108.3424 (2011) - 2010
- [j38]Roberto Barbuti, Nicoletta De Francesco, Luca Tesei
An Abstract Interpretation Approach for Enhancing the Java Bytecode Verifier. Comput. J. 53(6): 679-700 (2010) - [j37]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Damas P. Gruska
A Notion of Biological Diagnosability Inspired by the Notion of Opacity in Systems Security. Fundam. Informaticae 102(1): 19-34 (2010) - [j36]Roberto Barbuti, Andrea Maggiolo-Schettini, Angelo Troina, Mariangiola Dezani-Ciancaglini
A Formalism for the Description of Protein Interaction Dedicated to Jerzy Tiuryn on the Occasion of his 60th Birthday. Fundam. Informaticae 103(1-4): 1-29 (2010) - [j35]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Simone Tini
Compositional semantics of spiking neural P systems. J. Log. Algebraic Methods Program. 79(6): 304-316 (2010) - [c33]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Simone Tini
Membrane Systems Working in Generating and Accepting Modes: Expressiveness and Encodings. Int. Conf. on Membrane Computing 2010: 103-118 - [c32]Thomas Anung Basuki
Modelling the Dynamics of an Aedes albopictus Population. AMCA-POP 2010: 18-36 - [c31]Roberto Barbuti, Giulio Caravagna
Aspects of multiscale modelling in a process algebra for biological systems. MeCBIC 2010: 54-69 - [i1]Roberto Barbuti, Giovanni A. Cignoni, Paolo Milazzo:
A Model for Configuration Management of Open Software Systems. CoRR abs/1011.5389 (2010)
2000 – 2009
- 2009
- [j34]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Simone Tini
P Systems with Transport and Diffusion Membrane Channels. Fundam. Informaticae 93(1-3): 17-31 (2009) - [j33]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Luca Tesei
Timed P Automata. Fundam. Informaticae 94(1): 1-19 (2009) - [j32]Roberto Barbuti, Giulio Caravagna, Andrea Maggiolo-Schettini, Paolo Milazzo:
P Systems with Endosomes. Int. J. Comput. Commun. Control 4(3): 214-223 (2009) - [j31]Roberto Barbuti, Giulio Caravagna
An intermediate language for the stochastic simulation of biological systems. Theor. Comput. Sci. 410(33-34): 3085-3109 (2009) - [j30]Roberto Barbuti:
Giorgio Levi in Pisa. Theor. Comput. Sci. 410(46): 4603-4604 (2009) - [c30]Roberto Barbuti, Daniela Lepri, Andrea Maggiolo-Schettini, Paolo Milazzo, Giovanni Pardini
Simulation of Kohn's Molecular Interaction Maps through Translation into Stochastic CLS+. Ershov Memorial Conference 2009: 58-69 - [c29]Roberto Barbuti, Francesca Levi, Paolo Milazzo, Guido Scatena:
Probabilistic Model Checking of Biological Systems with Uncertain Kinetic Rates. RP 2009: 64-78 - [c28]Roberto Barbuti, Giulio Caravagna
On the Interpretation of Delays in Delay Stochastic Simulation of Biological Systems. COMPMOD 2009: 17-29 - [c27]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Giovanni Pardini
A Process Calculus for Molecular Interaction Maps. MeCBIC 2009: 35 - 2008
- [j29]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Angelo Troina:
Bisimulations in calculi modelling membranes. Formal Aspects Comput. 20(4-5): 351-377 (2008) - [j28]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Simone Tini:
A P Systems Flat Form Preserving Step-by-step Behaviour. Fundam. Informaticae 87(1): 1-34 (2008) - [j27]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Simone Tini
Compositional semantics and behavioral equivalences for P Systems. Theor. Comput. Sci. 395(1): 77-100 (2008) - [j26]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Paolo Tiberi, Angelo Troina:
Stochastic Calculus of Looping Sequences for the Modelling and Simulation of Cellular Pathways. Trans. Comp. Sys. Biology 9: 86-113 (2008) - [c26]Roberto Barbuti, Giulio Caravagna
The Calculus of Looping Sequences. SFM 2008: 387-423 - [c25]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Giovanni Pardini
Spatial Calculus of Looping Sequences. FBTC@ICALP 2008: 21-39 - [c24]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Luca Tesei
Timed P Automata. MeCBIC 2008: 21-36 - 2007
- [c23]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo:
Extending the Calculus of Looping Sequences to Model Protein Interaction at the Domain Level. ISBRA 2007: 638-649 - [c22]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Angelo Troina:
The Calculus of Looping Sequences for Modeling Biological Membranes. Workshop on Membrane Computing 2007: 54-76 - [c21]Roberto Barbuti, Giulio Caravagna
An Intermediate Language for the Simulation of Biological Systems. FBTC@CONCUR 2007: 19-34 - 2006
- [j25]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Angelo Troina:
A Calculus of Looping Sequences for Modelling Microbiological Systems. Fundam. Informaticae 72(1-3): 21-35 (2006) - [c20]Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Angelo Troina:
Bisimulation Congruences in the Calculus of Looping Sequences. ICTAC 2006: 93-107 - 2005
- [j24]Roberto Barbuti, Nicoletta De Francesco, Antonella Santone, Gigliola Vaglini:
Reduced Models for Efficient CCS Verification. Formal Methods Syst. Des. 26(3): 319-350 (2005) - [j23]Roberto Barbuti, Stefano Cataudella:
Abstract Interpretation of an Object Calculus for Synchronization Optimizations. Fundam. Informaticae 67(1-3): 1-12 (2005) - [j22]Roberto Barbuti, Stefano Cataudella, Andrea Maggiolo-Schettini, Paolo Milazzo, Angelo Troina:
A Probabilistic Model for Molecular Systems. Fundam. Informaticae 67(1-3): 13-27 (2005) - 2004
- [j21]Roberto Barbuti, Luca Tesei
Timed automata with urgent transitions. Acta Informatica 40(5): 317-347 (2004) - [j20]Roberto Barbuti, Cinzia Bernardeschi
Analyzing Information Flow Properties in Assembly Code by Abstract Interpretation. Comput. J. 47(1): 25-45 (2004) - [j19]Roberto Barbuti, Stefano Cataudella, Luca Tesei:
Abstract Interpretation Against Races. Fundam. Informaticae 60(1-4): 67-79 (2004) - [c19]Roberto Barbuti, Stefano Cataudella:
Java bytecode verification on Java cards. SAC 2004: 431-438 - 2003
- [j18]Roberto Barbuti, Luca Tesei:
A Decidable Notion of Timed Non-Interference. Fundam. Informaticae 54(2-3): 137-150 (2003) - 2002
- [j17]Roberto Barbuti, Nicoletta De Francesco, Antonella Santone, Luca Tesei:
A Notion of Non-Interference for Timed Automata. Fundam. Informaticae 51(1-2): 1-11 (2002) - [j16]Roberto Barbuti, Cinzia Bernardeschi
Abstract interpretation of operational semantics for secure information flow. Inf. Process. Lett. 83(2): 101-108 (2002) - [c18]Roberto Barbuti, Cinzia Bernardeschi, Nicoletta De Francesco:
Checking security of Java bytecode by abstract interpretation. SAC 2002: 229-236 - [c17]Roberto Barbuti, Luca Tesei
Fixing the Java bytecode verifier by a suitable type domain. SEKE 2002: 377-382 - 2001
- [j15]Roberto Barbuti, Nicoletta De Francesco, Luca Tesei:
Timed Automata with non-Instantaneous Actions. Fundam. Informaticae 47(3-4): 189-200 (2001) - 2000
- [j14]Roberto Barbuti, Nicoletta De Francesco, Antonella Santone, Gigliola Vaglini:
Logic Based Abstractions of Real-Time Systems. Formal Methods Syst. Des. 17(3): 201-220 (2000)
1990 – 1999
- 1999
- [j13]Roberto Barbuti, Nicoletta De Francesco, Antonella Santone, Gigliola Vaglini:
Abstract Interpretation of Trace Semantics for Concurrent Calculi. Inf. Process. Lett. 70(2): 69-78 (1999) - [j12]Roberto Barbuti, Nicoletta De Francesco, Antonella Santone, Gigliola Vaglini:
Selective Mu-Calculus and Formula-Based Equivalence of Transition Systems. J. Comput. Syst. Sci. 59(3): 537-556 (1999) - [j11]Roberto Barbuti, Nicoletta De Francesco, Antonella Santone, Gigliola Vaglini:
LORETO: A Tool for Reducing State Explosion in Verification of LOTOS Programs. Softw. Pract. Exp. 29(12): 1123-1147 (1999) - [c16]Roberto Barbuti, Nicoletta De Francesco, Antonella Santone, Gigliola Vaglini:
Formula Based Abstractions of Transition Systems for Real-Time Model Checking. World Congress on Formal Methods 1999: 289-306 - 1998
- [j10]Roberto Barbuti, Nicoletta De Francesco, Paolo Mancarella, Antonella Santone:
Towards a Logical Semantics for Pure Prolog. Sci. Comput. Program. 32(1-3): 145-176 (1998) - 1997
- [j9]Roberto Barbuti, Nicoletta De Francesco, Antonella Santone:
Algebraic Computational Models of OR-Parallel Execution of Prolog. Acta Informatica 34(6): 449-489 (1997) - [c15]Roberto Barbuti, Nicoletta De Francesco, Antonella Santone, Gigliola Vaglini:
Selective µ-calculus: New Modal Operators for Proving Properties on Reduced Transition Systems. FORTE 1997: 519-534 - 1996
- [c14]Roberto Barbuti, Paolo Mancarella:
A Multiple-Valued Logical Semantics for Prolog. ESOP 1996: 62-76 - 1995
- [j8]Roberto Barbuti, Michael Codish
Oracle Semantics for Prolog. Inf. Comput. 122(2): 178-200 (1995) - [c13]Roberto Barbuti, Nicoletta De Francesco, Antonella Santone:
Modeling OR-Parallel Execution of Prolog using CHOCS. ICLP 1995: 547-561 - 1994
- [e2]María Alpuente, Roberto Barbuti, Isidro Ramos:
1994 Joint Conference on Declarative Programming, GULP-PRODE'94 Peñiscola, Spain, September 19-22, 1994, Volume 1. 1994 [contents] - [e1]María Alpuente, Roberto Barbuti, Isidro Ramos:
1994 Joint Conference on Declarative Programming, GULP-PRODE'94 Peñiscola, Spain, September 19-22, 1994, Volume 2. 1994 [contents] - 1993
- [j7]Roberto Barbuti, Michael Codish
Modelling Prolog Control. J. Log. Comput. 3(6): 579-603 (1993) - [j6]Roberto Barbuti, Roberto Giacobazzi, Giorgio Levi:
A General Framework for Semantics-Based Bottom-Up Abstract Interpretation of Logic Programs. ACM Trans. Program. Lang. Syst. 15(1): 133-181 (1993) - [c12]Roberto Barbuti, E. Bellugi, Mauro Gaspari, Roberto Giacobazzi:
La Terminazione di Prolog Modellata in un Linguaggio Logico con Vincoli. GULP 1993: 341-358 - 1992
- [j5]Roberto Barbuti, Roberto Giacobazzi:
A Bottom-Up Polymorphic Type Inference in Logic Programming. Sci. Comput. Program. 19(3): 281-313 (1992) - [c11]Roberto Barbuti, Michael Codish
Oracle Semantics for Prolog. ALP 1992: 100-114 - [c10]Roberto Barbuti, Michael Codish
Modeling Prolog Control. POPL 1992: 95-104 - 1991
- [c9]Roberto Barbuti, Michael Codish, Roberto Giacobazzi, Giorgio Levi:
Modelling Prolog Control. JTASPEFT/WSA 1991: 117-124 - 1990
- [j4]Roberto Barbuti, Maurizio Martelli:
Recognizing Non-Floundering Logic Programs and Goals. Int. J. Found. Comput. Sci. 1(2): 151-164 (1990) - [j3]Roberto Barbuti, Paolo Mancarella, Dino Pedreschi
A Transformational Approach to Negation in Logic Programming. J. Log. Program. 8(3): 201-228 (1990)
1980 – 1989
- 1988
- [c8]Roberto Barbuti, Maurizio Martelli:
A Tool to Check the Non-Floundering Logic Programs and Goals. PLILP 1988: 58-67 - 1987
- [c7]Roberto Barbuti, Paolo Mancarella, Dino Pedreschi
Intensional Negation of Logic Programs: Examples and Implementation Techniques. TAPSOFT, Vol.2 1987: 96-110 - 1986
- [j2]C. Aquilano, Roberto Barbuti, P. Bocchetti, Maurizio Martelli:
Negation as Failure. Completeness of the Query Evaluation Process for Horn Clause Programs with Recursive Definitions. J. Autom. Reason. 2(2): 155-170 (1986) - [c6]Roberto Barbuti, C. D'Ascanio, Franco Turini:
Cooperating Logic Theories. AIMSA 1986: 165-172 - [c5]Roberto Barbuti, Maurizio Martelli:
Completeness of the SLDNF-resolution for a class of logic programs. ICLP 1986: 600-614 - [p1]Roberto Barbuti, Marco Bellia, Giorgio Levi, Maurizio Martelli:
LEAF: A Language which Integrates Logic, Equations and Functions. Logic Programming: Functions, Relations, and Equations 1986: 201-238 - 1984
- [c4]Roberto Barbuti, Marco Bellia, Giorgio Levi, Maurizio Martelli:
On the Integration of Logic Programming and Functional Programming. SLP 1984: 160-166 - 1983
- [j1]Roberto Barbuti, Alberto Martelli:
A Structured Approach to Static Semantics Correctness. Sci. Comput. Program. 3(3): 279-311 (1983) - [c3]Roberto Barbuti, Alberto Martelli:
A Constructive Approach to Static Verification of Program Properties. IFIP Congress 1983: 457-462 - 1982
- [c2]Roberto Barbuti, Pierpaolo Degano, Giorgio Levi:
Toward an Inductionless Technique for Proving Properties of Logic Programs. ICLP 1982: 175-181 - 1980
- [c1]Roberto Barbuti, Alberto Martelli:
Static Type Checking for Languages with Parametric Types and Polymorphic Procedures. Symposium on Programming 1980: 1-16
Coauthor Index
[j58] [j57] [j56] [j55] [j54] [j53] [c44] [c43] [c42] [j52] [j51] [c41] [j50] [c40] [c39] [j49] [j48] [c38] [c37] [c36] [c35] [j46] [j45] [c34] [j44] [j43] [j41] [j40] [j39] [i2] [j37] [j36] [j35] [c33] [c32] [c31] [i1] [j34] [j33] [j32] [j31] [c30] [c29] [c28] [c27] [j29] [j28] [j27] [j26] [c26] [c25] [c24] [c23] [c22] [c21] [j25] [c20] [j22]
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