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Jochen Supper
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2010 – 2019
- 2012
- [j9]Thomas Strach, Frank E. Bosco, Kenneth L. Christian, Kevin R. Covi, Martin Eckert, Gregory R. Edlund, Roland Frech, Hubert Harrer, Andreas Huber, Dierk Kaller, Martin Kindscher, A. Z. Muszynski, G. A. Peterson, Claudio Siviero
, Jochen Supper, Otto A. Torreiter, Thomas-Michael Winkel:
Electronic packaging of the IBM System z196 enterprise-class server processor cage. IBM J. Res. Dev. 56(1): 2 (2012) - 2010
- [j8]Hannes Planatscher, Jochen Supper, Oliver Poetz
Optimal selection of epitopes for TXP-immunoaffinity mass spectrometry. Algorithms Mol. Biol. 5: 28 (2010)
2000 – 2009
- 2009
- [b1]Jochen Supper:
Computational inference of gene regulatory networks. Eberhard Karls University of Tübingen, 2009, ISBN 978-3-86853-210-4, pp. 1-162 - [j7]Andreas Dräger
Modeling metabolic networks in C. glutamicum: a comparison of rate laws in combination with various parameter optimization strategies. BMC Syst. Biol. 3: 5 (2009) - [j6]Jochen Supper, Lucía Spangenberg, Hannes Planatscher, Andreas Dräger
BowTieBuilder: modeling signal transduction pathways. BMC Syst. Biol. 3: 67 (2009) - [j5]Thomas-Michael Winkel, Hubert Harrer, Dierk Kaller, Jochen Supper, Daniel M. Dreps, Kenneth L. Christian, D. Cosmadelis, Tingdong Zhou, Thomas Strach, J. Ludwig, David L. Edwards:
Packaging design challenges of the IBM System z10 Enterprise Class server. IBM J. Res. Dev. 53(1): 10 (2009) - 2008
- [j4]Andreas Dräger
SBMLsqueezer: A CellDesigner plug-in to generate kinetic rate equations for biochemical networks. BMC Syst. Biol. 2: 39 (2008) - [c9]Jochen Supper, Claas aufm Kampe, Dierk Wanke, Kenneth W. Berendzen, Klaus Harter, Richard Bonneau, Andreas Zell:
Modeling gene regulation and spatial organization of sequence based motifs. BIBE 2008: 1-7 - 2007
- [j3]Jochen Supper, Martin Strauch, Dierk Wanke
EDISA: extracting biclusters from multiple time-series of gene expression profiles. BMC Bioinform. 8 (2007) - [j2]Martin Strauch, Jochen Supper, Christian Spieth, Dierk Wanke, Joachim Kilian, Klaus Harter, Andreas Zell:
A Two-Step Clustering for 3-D Gene Expression Data Reveals the Main Features of the Arabidopsis Stress Response. J. Integr. Bioinform. 4(1) (2007) - [c8]Jochen Supper, Holger Fröhlich, Christian Spieth, Andreas Dräger, Andreas Zell:
Inferring Gene Regulatory Networks by Machine Learning Methods. APBC 2007: 247-256 - [c7]Jochen Supper, Holger Fröhlich, Andreas Zell:
Gene Regulatory Network Inference via Regression Based Topological Refinement. APBC 2007: 267-276 - [c6]Andreas Dräger
Comparing various evolutionary algorithms on the parameter optimization of the valine and leucine biosynthesis in corynebacterium glutamicum. IEEE Congress on Evolutionary Computation 2007: 620-627 - [c5]Andreas Dräger
Benchmarking evolutionary algorithms on convenience kinetics modelsof the valine and leucine biosynthesis in C. glutamicum. IEEE Congress on Evolutionary Computation 2007: 896-903 - [c4]Jochen Supper, Christian Spieth, Andreas Zell:
Reconstructing Linear Gene Regulatory Networks. EvoBIO 2007: 270-279 - 2006
- [j1]Christian Spieth, Jochen Supper, Felix Streichert, Nora Speer, Andreas Zell:
JCell - a Java-based framework for inferring regulatory networks from time series data. Bioinform. 22(16): 2051-2052 (2006) - 2005
- [c3]Christian Spieth, Felix Streichert, Jochen Supper, Nora Speer, Andreas Zell:
Feedback Memetic Algorithms for Modeling Gene Regulatory Networks. CIBCB 2005: 61-67 - [c2]Jochen Supper, Christian Spieth, Andreas Zell:
Reverse Engineering Non-Linear Gene Regulatory Networks Based on the Bacteriophage lambda cI Circuit. CIBCB 2005: 325-332 - [c1]Jochen Supper, Pierre Dönnes, Oliver Kohlbacher:
Analysis of MHC-Peptide Binding Using Amino Acid Property-Based Decision Rules. ICAPR (1) 2005: 446-453
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