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Jeremy K. Nicholson
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2020 – today
- 2021
- [j10]Ruey Leng Loo, Queenie Chan, Henrik Antti, Jia V. Li, Hutan Ashrafian, Paul Elliott, Jeremiah Stamler, Jeremy K. Nicholson, Elaine Holmes, Julien Wist:
Strategy for improved characterization of human metabolic phenotypes using a COmbined Multi-block Principal components Analysis with Statistical Spectroscopy (COMPASS). Bioinform. 36(21): 5229-5236 (2021)
2010 – 2019
- 2019
- [j9]Paolo Inglese, Gonçalo D. S. Correia, Zoltan Takats, Jeremy K. Nicholson, Robert C. Glen:
SPUTNIK: an R package for filtering of spatially related peaks in mass spectrometry imaging data. Bioinform. 35(1): 178-180 (2019) - [j8]Andrea Rodriguez-Martinez, Rafael Ayala, Joram M. Posma, Nikita Harvey, Beatriz Jiménez, Kazuhiro Sonomura, Taka-Aki Sato, Fumihiko Matsuda, Pierre A. Zalloua, Dominique Gauguier, Jeremy K. Nicholson, Marc-Emmanuel Dumas:
pJRES Binning Algorithm (JBA): a new method to facilitate the recovery of metabolic information from pJRES 1H NMR spectra. Bioinform. 35(11): 1916-1922 (2019) - [j7]Caroline J. Sands, Arnaud M. Wolfer, Gonçalo D. S. Correia, Noureddin Sadawi, Arfan Ahmed, Beatriz Jiménez, Matthew R. Lewis, Robert C. Glen, Jeremy K. Nicholson, Jake T. M. Pearce:
The nPYc-Toolbox, a Python module for the pre-processing, quality-control and analysis of metabolic profiling datasets. Bioinform. 35(24): 5359-5360 (2019) - [i1]Jianliang Gao, Noureddin Sadawi, Ibrahim Karaman, Jake T. M. Pearce, Pablo A. Moreno, Anders Larsson, Marco Capuccini, Paul Elliott, Jeremy K. Nicholson, Timothy M. D. Ebbels, Robert C. Glen:
Metabolomics in the Cloud: Scaling Computational Tools to Big Data. CoRR abs/1904.02288 (2019) - 2018
- [j6]Andrea Rodriguez-Martinez, Joram M. Posma, Rafael Ayala, Ana Luísa Neves, Maryam Anwar, Enrico Petretto, Costanza Emanueli, Dominique Gauguier, Jeremy K. Nicholson, Marc-Emmanuel Dumas:
MWASTools: an R/bioconductor package for metabolome-wide association studies. Bioinform. 34(5): 890-892 (2018) - 2017
- [j5]Andrea Rodriguez-Martinez, Rafael Ayala, Joram M. Posma, Ana Luísa Neves, Dominique Gauguier, Jeremy K. Nicholson, Marc-Emmanuel Dumas:
MetaboSignal: a network-based approach for topological analysis of metabotype regulation via metabolic and signaling pathways. Bioinform. 33(5): 773-775 (2017) - 2014
- [j4]Joram M. Posma, Steven L. Robinette, Elaine Holmes, Jeremy K. Nicholson:
MetaboNetworks, an interactive Matlab-based toolbox for creating, customizing and exploring sub-networks from KEGG. Bioinform. 30(6): 893-895 (2014)
2000 – 2009
- 2009
- [j3]Rachel Cavill, Hector C. Keun, Elaine Holmes, John C. Lindon, Jeremy K. Nicholson, Timothy M. D. Ebbels:
Genetic algorithms for simultaneous variable and sample selection in metabonomics. Bioinform. 25(1): 112-118 (2009) - 2008
- [j2]Max Bylesjö, Mattias Rantalainen, Jeremy K. Nicholson, Elaine Holmes, Johan Trygg:
K-OPLS package: Kernel-based orthogonal projections to latent structures for prediction and interpretation in feature space. BMC Bioinform. 9 (2008) - [j1]Mattias Rantalainen, Olivier Cloarec, Timothy M. D. Ebbels, Torbjörn Lundstedt, Jeremy K. Nicholson, Elaine Holmes, Johan Trygg:
Piecewise multivariate modelling of sequential metabolic profiling data. BMC Bioinform. 9 (2008)
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