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Anthony N. Nguyen
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2020 – today
- 2025
- [j25]Jinghui Liu, Bevan Koopman, Nathan J. Brown, Kevin Chu, Anthony N. Nguyen:
Generating synthetic clinical text with local large language models to identify misdiagnosed limb fractures in radiology reports. Artif. Intell. Medicine 159: 103027 (2025) - 2024
- [j24]James A. Hughes
, Yutong Wu
Analyzing pain patterns in the emergency department: Leveraging clinical text deep learning models for real-world insights. Int. J. Medical Informatics 190: 105544 (2024) - [c48]Aaron Nicolson, Jinghui Liu, Jason Dowling, Anthony N. Nguyen, Bevan Koopman:
e-Health CSIRO at RRG24: Entropy-Augmented Self-Critical Sequence Training for Radiology Report Generation. BioNLP@ACL 2024: 99-104 - [c47]Jinghui Liu, Aaron Nicolson, Jason Dowling, Bevan Koopman, Anthony N. Nguyen:
e-Health CSIRO at "Discharge Me!" 2024: Generating Discharge Summary Sections with Fine-tuned Language Models. BioNLP@ACL 2024: 675-684 - [i9]Jinghui Liu, Aaron Nicolson, Jason Dowling, Bevan Koopman, Anthony N. Nguyen:
e-Health CSIRO at "Discharge Me!" 2024: Generating Discharge Summary Sections with Fine-tuned Language Models. CoRR abs/2407.02723 (2024) - [i8]Aaron Nicolson, Jinghui Liu, Jason Dowling, Anthony N. Nguyen, Bevan Koopman:
e-Health CSIRO at RRG24: Entropy-Augmented Self-Critical Sequence Training for Radiology Report Generation. CoRR abs/2408.03500 (2024) - 2023
- [j23]Leibo Liu
Automated ICD coding using extreme multi-label long text transformer-based models. Artif. Intell. Medicine 144: 102662 (2023) - [j22]Jinghui Liu
Attention-based multimodal fusion with contrast for robust clinical prediction in the face of missing modalities. J. Biomed. Informatics 145: 104466 (2023) - [c46]Filip Rusak, Bevan Koopman, Nathan J. Brown, Kevin Chu, Jinghui Liu, Anthony N. Nguyen:
Catching Misdiagnosed Limb Fractures in the Emergency Department Using Cross-institution Transfer Learning. ALTA 2023: 78-87 - [c45]Jinghui Liu, Anthony N. Nguyen:
Enhancing Bacterial Infection Prediction in Critically Ill Patients by Integrating Clinical Text. ALTA 2023: 118-124 - [c44]Yutong Wu
Developing Robust Clinical Text Deep Learning Models - A "Painless" Approach. MedInfo 2023: 705-709 - [c43]Jinghui Liu
Uncovering Variations in Clinical Notes for NLP Modeling. MedInfo 2023: 1460-1461 - [i7]Jinghui Liu, Daniel Capurro, Anthony N. Nguyen, Karin Verspoor:
Improving Text-based Early Prediction by Distillation from Privileged Time-Series Text. CoRR abs/2301.10887 (2023) - 2022
- [j21]Jinghui Liu
"Note Bloat" impacts deep learning-based NLP models for clinical prediction tasks. J. Biomed. Informatics 133: 104149 (2022) - [j20]Leibo Liu
Hierarchical label-wise attention transformer model for explainable ICD coding. J. Biomed. Informatics 133: 104161 (2022) - [j19]Leibo Liu
De-identifying Australian hospital discharge summaries: An end-to-end framework using ensemble of deep learning models. J. Biomed. Informatics 135: 104215 (2022) - [i6]Leibo Liu
Hierarchical Label-wise Attention Transformer Model for Explainable ICD Coding. CoRR abs/2204.10716 (2022) - [i5]Leibo Liu
Automated ICD Coding using Extreme Multi-label Long Text Transformer-based Models. CoRR abs/2212.05857 (2022) - 2021
- [j18]Jinghui Liu
Early prediction of diagnostic-related groups and estimation of hospital cost by processing clinical notes. npj Digit. Medicine 4 (2021) - [i4]Leibo Liu, Óscar Pérez Concha, Anthony N. Nguyen, Vicki Bennett, Louisa Jorm:
De-identifying Hospital Discharge Summaries: An End-to-End Framework using Ensemble of De-Identifiers. CoRR abs/2101.00146 (2021) - 2020
- [j17]Hamed Hassanzadeh
Matching patients to clinical trials using semantically enriched document representation. J. Biomed. Informatics 105: 103406 (2020) - [c42]Thanh Vu, Dat Quoc Nguyen, Anthony N. Nguyen
A Label Attention Model for ICD Coding from Clinical Text. IJCAI 2020: 3335-3341 - [i3]Thanh Vu, Dat Quoc Nguyen, Anthony N. Nguyen:
A Label Attention Model for ICD Coding from Clinical Text. CoRR abs/2007.06351 (2020)
2010 – 2019
- 2019
- [j16]Richard Khor
Extracting tumour prognostic factors from a diverse electronic record dataset in genito-urinary oncology. Int. J. Medical Informatics 121: 53-57 (2019) - [j15]Hamed Hassanzadeh
Quantifying semantic similarity of clinical evidence in the biomedical literature to facilitate related evidence synthesis. J. Biomed. Informatics 100 (2019) - [c41]Thanh Vu, Anthony N. Nguyen, Nathan J. Brown, James Hughes:
Identifying Patients with Pain in Emergency Departments using Conventional Machine Learning and Deep Learning. ALTA 2019: 111-119 - [c40]Anthony N. Nguyen
A Decision Support System for Pathology Test Result Reviews in an Emergency Department to Support Patient Safety and Increase Efficiency. MedInfo 2019: 729-733 - 2018
- [j14]Bevan Koopman, Guido Zuccon
Extracting cancer mortality statistics from death certificates: A hybrid machine learning and rule-based approach for common and rare cancers. Artif. Intell. Medicine 89: 1-9 (2018) - [j13]Hamed Hassanzadeh
Transferability of artificial neural networks for clinical document classification across hospitals: A case study on abnormality detection from radiology reports. J. Biomed. Informatics 85: 68-79 (2018) - [c39]Bevan Koopman, Anthony N. Nguyen, Danica Cossio, Mary-Jane Courage, Gary Francois:
Extracting Cancer Mortality Statistics from Free-text Death Certificates: A View from the Trenches. ADCS 2018: 6:1-6:4 - [c38]Hamed Hassanzadeh, Mahnoosh Kholghi, Anthony N. Nguyen, Kevin Chu:
Clinical Document Classification Using Labeled and Unlabeled Data Across Hospitals. AMIA 2018 - [c37]Anthony N. Nguyen, Donna L. Truran, Madonna Kemp, Bevan Koopman, David Conlan, John O'Dwyer, Ming Zhang, Sarvnaz Karimi
Computer-Assisted Diagnostic Coding: Effectiveness of an NLP-based approach using SNOMED CT to ICD-10 mappings. AMIA 2018 - [c36]Thanat Chokwijitkul, Anthony N. Nguyen, Hamed Hassanzadeh, Siegfried Perez:
Identifying Risk Factors For Heart Disease in Electronic Medical Records: A Deep Learning Approach. BioNLP 2018: 18-27 - [c35]Son N. Tran, Qing Zhang, Anthony N. Nguyen, Xuan-Son Vu, Ngo Tung Son
Improving Recurrent Neural Networks with Predictive Propagation for Sequence Labelling. ICONIP (1) 2018: 452-462 - [c34]Duy-Hoa Ngo, Alejandro Metke-Jimenez, Anthony N. Nguyen:
Knowledge-based Feature Engineering for Detecting Medication and Adverse Drug Events from Electronic Health Records. Medication and Adverse Drug Event Detection 2018: 31-38 - [i2]Hamed Hassanzadeh, Mahnoosh Kholghi, Anthony N. Nguyen, Kevin Chu:
Clinical Document Classification Using Labeled and Unlabeled Data Across Hospitals. CoRR abs/1812.00677 (2018) - 2017
- [j12]Mahnoosh Kholghi
Active learning reduces annotation time for clinical concept extraction. Int. J. Medical Informatics 106: 25-31 (2017) - [j11]Mahnoosh Kholghi
Clinical information extraction using small data: An active learning approach based on sequence representations and word embeddings. J. Assoc. Inf. Sci. Technol. 68(11): 2543-2556 (2017) - [c33]Sarvnaz Karimi
Automatic Diagnosis Coding of Radiology Reports: A Comparison of Deep Learning and Conventional Classification Methods. BioNLP 2017: 328-332 - 2016
- [j10]Mahnoosh Kholghi
Active learning: a step towards automating medical concept extraction. J. Am. Medical Informatics Assoc. 23(2): 289-296 (2016) - [c32]Hamed Hassanzadeh, Anthony N. Nguyen, Bevan Koopman:
Evaluation of Medical Concept Annotation Systems on Clinical Records. ALTA 2016: 15-24 - [c31]Mahnoosh Kholghi, Lance De Vine, Laurianne Sitbon, Guido Zuccon, Anthony N. Nguyen:
The Benefits of Word Embeddings Features for Active Learning in Clinical Information Extraction. ALTA 2016: 25-34 - [c30]Anthony N. Nguyen, Julie Moore, John O'Dwyer, Shoni Philpot:
Automated Cancer Registry Notifications: Validation of a Medical Text Analytics System for Identifying Patients with Cancer from a State-Wide Pathology Repository. AMIA 2016 - [i1]Mahnoosh Kholghi, Lance De Vine, Laurianne Sitbon, Guido Zuccon, Anthony N. Nguyen:
The benefits of word embeddings features for active learning in clinical information extraction. CoRR abs/1607.02810 (2016) - 2015
- [j9]Guido Zuccon, Sankalp Khanna
Automatic detection of tweets reporting cases of influenza like illnesses in Australia. Health Inf. Sci. Syst. 3(1) (2015) - [j8]Bevan Koopman, Guido Zuccon, Anthony N. Nguyen
Automatic ICD-10 classification of cancers from free-text death certificates. Int. J. Medical Informatics 84(11): 956-965 (2015) - [j7]Bevan Koopman, Sarvnaz Karimi
Automatic classification of diseases from free-text death certificates for real-time surveillance. BMC Medical Informatics Decis. Mak. 15: 53 (2015) - [c29]Lance De Vine, Mahnoosh Kholghi, Guido Zuccon, Laurianne Sitbon, Anthony N. Nguyen:
Analysis of Word Embeddings and Sequence Features for Clinical Information Extraction. ALTA 2015: 21-30 - [c28]Anthony N. Nguyen, Jane Hunter, Hamed Hassanzadeh, Diego Mollá, Tudor Groza:
Similarity Metrics for Clustering PubMed Abstracts for Evidence Based Medicine. ALTA 2015: 48-56 - [c27]Hamed Tayebikhorami, Alejandro Metke-Jimenez, Anthony N. Nguyen
Oyster: A Tool for Fine-Grained Ontological Annotations in Free-Text. AIRS 2015: 440-446 - [c26]Bevan Koopman, Guido Zuccon, Amol Wagholikar, Kevin Chu, John O'Dwyer, Anthony N. Nguyen, Gerben Keijzers:
Automated Reconciliation of Radiology Reports and Discharge Summaries. AMIA 2015 - [c25]Anthony N. Nguyen, Julie Moore, John O'Dwyer, Shoni Colquist:
Assessing the Utility of Automatic Cancer Registry Notifications Data Extraction from Free-Text Pathology Reports. AMIA 2015 - [c24]Sarvnaz Karimi
CADEminer: A System for Mining Consumer Reports on Adverse Drug Side Effects. ESAIR@CIKM 2015: 47-50 - [c23]Mahnoosh Kholghi
External Knowledge and Query Strategies in Active Learning: a Study in Clinical Information Extraction. CIKM 2015: 143-152 - [c22]Hamed Hassanzadeh
UQeResearch: Semantic Textual Similarity Quantification. SemEval@NAACL-HLT 2015: 123-127 - 2014
- [j6]Guido Zuccon, Daniel Kotzur, Anthony N. Nguyen
De-identification of health records using Anonym: Effectiveness and robustness across datasets. Artif. Intell. Medicine 61(3): 145-151 (2014) - [c21]Shahin Mirhosseini, Guido Zuccon, Bevan Koopman, Anthony N. Nguyen, Michael Lawley:
Medical Free-Text to Concept Mapping as an Information Retrieval Problem. ADCS 2014: 93 - [c20]Mahnoosh Kholghi, Laurianne Sitbon, Guido Zuccon, Anthony N. Nguyen:
Factors Influencing Robustness and Effectiveness of Conditional Random Fields in Active Learning Frameworks. AusDM 2014: 69-78 - [c19]Hamed Hassanzadeh, Tudor Groza, Anthony N. Nguyen, Jane Hunter:
Load Balancing for Imbalanced Data Sets: Classifying Scientific Artefacts for Evidence Based Medicine. PRICAI 2014: 972-984 - 2013
- [c18]Timothy Chappell, Shlomo Geva
Efficient top-k retrieval with signatures. ADCS 2013: 10-17 - [c17]Lavish Lalwani, Guido Zuccon, Mohamed A. Sharaf, Anthony N. Nguyen:
Towards a Visually Enhanced Medical Search Engine. AIH+CARE@AUS-AI 2013: 22-38 - [c16]Guido Zuccon, Alexander Holloway, Bevan Koopman, Anthony N. Nguyen:
Identify Disorders in Health Records using Conditional Random Fields and Metamap AEHRC at ShARe/CLEF 2013 eHealth Evaluation Lab Task 1. CLEF (Working Notes) 2013 - [c15]Guido Zuccon, Bevan Koopman, Anthony N. Nguyen:
Retrieval of Health Advice on the Web AEHRC at ShARe/CLEF eHealth Evaluation Lab Task 3. CLEF (Working Notes) 2013 - 2012
- [c14]Michael Symonds, Guido Zuccon, Bevan Koopman, Peter Bruza, Anthony N. Nguyen:
Semantic Judgement of Medical Concepts: Combining Syntagmatic and Paradigmatic Information with the Tensor Encoding Model. ALTA 2012: 15-22 - [c13]Guido Zuccon
Exploiting medical hierarchies for concept-based information retrieval. ADCS 2012: 111-114 - [c12]Anthony N. Nguyen, Julie Moore, Guido Zuccon, Michael Lawley, Shoni Colquist:
Classification of pathology reports for cancer registry notifications. HIC 2012: 150-156 - [c11]Guido Zuccon, Anthony N. Nguyen, Anton Bergheim, Sandra Wickman, Narelle Grayson:
The impact of OCR accuracy on automated cancer classification of pathology reports. HIC 2012: 250-256 - [c10]Bevan Koopman, Guido Zuccon, Anthony N. Nguyen, Deanne Vickers, Luke Butt, Peter Bruza:
Exploiting SNOMED CT Concepts & Relationships for Clinical Information Retrieval: Australian e-Health Research Centre and Queensland University of Technology at the TREC 2012 Medical Track. TREC 2012 - 2011
- [c9]Anthony N. Nguyen
Automatic Extraction of Cancer Characteristics from Free-Text Pathology Reports for Cancer Notifications. HIC 2011: 117-124 - 2010
- [j5]Anthony N. Nguyen
Symbolic rule-based classification of lung cancer stages from free-text pathology reports. J. Am. Medical Informatics Assoc. 17(4): 440-445 (2010)
2000 – 2009
- 2008
- [c8]Anthony J. Maeder
Assuring Authenticity of Digital Mammograms by Image Watermarking. Digital Mammography / IWDM 2008: 204-211 - 2007
- [j4]Iain McCowan, Darren Moore, Anthony N. Nguyen, Rayleen V. Bowman, Belinda E. Clarke, Edwina E. Duhig, Mary-Jane Fry:
Application of Information Technology: Collection of Cancer Stage Data by Classifying Free-text Medical Reports. J. Am. Medical Informatics Assoc. 14(6): 736-745 (2007) - 2006
- [j3]Anthony N. Nguyen, Vinod Chandran
Gaze tracking for region of interest coding in JPEG 2000. Signal Process. Image Commun. 21(5): 359-377 (2006) - 2005
- [c7]Chris McCool
Object Recognition Using Stereo Vision and Higher Order Spectra. DICTA 2005: 6 - [c6]Dian Tjondronegoro, Jinglan Zhang, Jinfeng Gu, Anthony N. Nguyen, Shlomo Geva:
Integrating Text Retrieval and Image Retrieval in XML Document Searching. INEX 2005: 511-524 - 2004
- [j2]Anthony N. Nguyen, Vinod Chandran
Importance prioritisation in JPEG 2000 for improved interpretability. Signal Process. Image Commun. 19(10): 1005-1028 (2004) - [c5]Anthony N. Nguyen, Vinod Chandran, Sridha Sridharan:
Visual attention based roi maps from gaze tracking data. ICIP 2004: 3495-3498 - 2003
- [j1]Anthony N. Nguyen, Vinod Chandran
Interpretability performance assessment of JPEG2000 and part 1 compliant region of interest coding. IEEE Trans. Consumer Electron. 49(4): 808-817 (2003) - [c4]Anthony N. Nguyen, Vinod Chandran, Sridha Sridharan, Robert Prandolini:
Importance prioritization coding in JPEG2000 for interpretability with application to surveillance imagery. VCIP 2003: 806-817 - 2002
- [c3]Anthony N. Nguyen, Vinod Chandran, Sridha Sridharan, Robert Prandolini:
Progressive coding in JPEG2000 - improving content recognition performance using ROIs and importance maps. EUSIPCO 2002: 1-4 - 2001
- [c2]Anthony N. Nguyen, Vinod Chandran, Sridha Sridharan, Robert Prandolini:
Importance coding of still imagery based on importance maps of visually interpretable regions. ICIP (3) 2001: 776-779 - [c1]Anthony N. Nguyen, Vinod Chandran, Sridha Sridharan, Robert Prandolini:
Importance coding of surveillance imagery for interpretability using quadtree dynamic importance maps. ISSPA 2001: 557-560
Coauthor Index
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