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Pierre Rouzé
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2000 – 2009
- 2008
- [c5]Thomas Abeel
, Yvan Saeys
ProSOM: core promoter prediction based on unsupervised clustering of DNA physical profiles. ISMB 2008: 24-31 - 2007
- [j15]Yvan Saeys
In search of the small ones: improved prediction of short exons in vertebrates, plants, fungi and protists. Bioinform. 23(4): 414-420 (2007) - 2005
- [j14]Sven Degroeve
SpliceMachine: predicting splice sites from high-dimensional local context representations. Bioinform. 21(8): 1332-1338 (2005) - [j13]Sébastien Aubourg, Véronique Brunaud, Clémence Bruyère, J. Mark Cock
GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts. Nucleic Acids Res. 33(Database-Issue): 641-646 (2005) - 2004
- [j12]Eric Bonnet, Jan Wuyts, Pierre Rouzé, Yves Van de Peer
Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences. Bioinform. 20(17): 2911-2917 (2004) - [j11]Yvan Saeys
Feature selection for splice site prediction: A new method using EDA-based feature ranking. BMC Bioinform. 5: 64 (2004) - 2003
- [j10]Stephane Rombauts
AFLPinSilico, simulating AFLP fingerprints. Bioinform. 19(6): 776-777 (2003) - [j9]Vincent Thareau, Patrice Déhais, Carine Serizet, Pierre Hilson, Pierre Rouzé, Sébastien Aubourg:
Automatic design of gene-specific sequence tags for genome-wide functional studies. Bioinform. 19(17): 2191-2198 (2003) - [j8]Mark L. Crowe
CATMA: a complete Arabidopsis GST database. Nucleic Acids Res. 31(1): 156-158 (2003) - [j7]Philippe Blayo, Pierre Rouzé, Marie-France Sagot:
Orphan gene finding - an exon assembly approach. Theor. Comput. Sci. 290(3): 1407-1431 (2003) - [c4]Yvan Saeys, Sven Degroeve, Dirk Aeyels, Yves Van de Peer, Pierre Rouzé:
Fast feature selection using a simple estimation of distribution algorithm: a case study on splice site prediction. ECCB 2003: 179-188 - 2002
- [j6]Gert Thijs, Yves Moreau
INCLUSive: INtegrated Clustering, Upstream sequence retrieval and motif Sampling. Bioinform. 18(2): 331-332 (2002) - [j5]Gert Thijs
A Gibbs Sampling Method to Detect Overrepresented Motifs in the Upstream Regions of Coexpressed Genes. J. Comput. Biol. 9(2): 447-464 (2002) - [j4]Magali Lescot
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. Nucleic Acids Res. 30(1): 325-327 (2002) - [c3]Sven Degroeve, Bernard De Baets, Yves Van de Peer, Pierre Rouzé:
Feature subset selection for splice site prediction. ECCB 2002: 75-83 - 2001
- [j3]Gert Thijs, Magali Lescot, Kathleen Marchal
A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling. Bioinform. 17(12): 1113-1122 (2001) - [c2]Gert Thijs, Kathleen Marchal, Magali Lescot, Stephane Rombauts, Bart De Moor, Pierre Rouzé, Yves Moreau:
A Gibbs sampling method to detect over-represented motifs in the upstream regions of co-expressed genes. RECOMB 2001: 305-312 - 2000
- [c1]Thomas Schiex, Annick Moisan, Pierre Rouzé:
EUGÈNE: An Eukaryotic Gene Finder That Combines Several Sources of Evidence. JOBIM 2000: 111-125
1990 – 1999
- 1999
- [j2]Nathalie Pavy, Stephane Rombauts, Patrice Déhais, Catherine Mathé, Ramana V. Davuluri, Philippe Leroy, Pierre Rouzé:
Evaluation of gene prediction software using a genomic data set: application to <$O_SSF>Arabidopsis thaliana<$C_SSF>sequences. Bioinform. 15(11): 887-899 (1999) - [j1]Stephane Rombauts
PlantCARE, a plant cis-acting regulatory element database. Nucleic Acids Res. 27(1): 295-296 (1999)
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