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Yun Tang 0001
Person information
- affiliation: East China University of Science and Technology, School of Pharmacy, Shanghai, China
Other persons with the same name
- Yun Tang — disambiguation page
- Yun Tang 0002
— Facebook AI, USA
- Yun Tang 0003
- Yun Tang 0004
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2020 – today
- 2024
- [j55]Yinyin Wang
Herb-CMap: a multimodal fusion framework for deciphering the mechanisms of action in traditional Chinese medicine using Suhuang antitussive capsule as a case study. Briefings Bioinform. 25(5) (2024) - [j54]Keyun Zhu, Mengting Huang, Yimeng Wang, Yaxin Gu, Weihua Li, Guixia Liu
MetaPredictor: in silico prediction of drug metabolites based on deep language models with prompt engineering. Briefings Bioinform. 25(5) (2024) - [j53]Yimeng Wang, Xinxin Yu, Yaxin Gu, Weihua Li
XGraphCDS: An explainable deep learning model for predicting drug sensitivity from gene pathways and chemical structures. Comput. Biol. Medicine 168: 107746 (2024) - [j52]Zhuohang Yu, Zengrui Wu, Moran Zhou, Long Chen, Weihua Li
mtADENet: A novel interpretable method integrating multiple types of network-based inference approaches for prediction of adverse drug events. Comput. Biol. Medicine 168: 107831 (2024) - [j51]Yang Tan
MedChatZH: A tuning LLM for traditional Chinese medicine consultations. Comput. Biol. Medicine 172: 108290 (2024) - [j50]Yaxin Gu, Yimeng Wang, Keyun Zhu, Weihua Li, Guixia Liu, Yun Tang:
DBPP-Predictor: a novel strategy for prediction of chemical drug-likeness based on property profiles. J. Cheminformatics 16(1): 4 (2024) - [j49]Zhuohang Yu, Zengrui Wu
Network-Based Methods and Their Applications in Drug Discovery. J. Chem. Inf. Model. 64(1): 57-75 (2024) - [j48]Yanjun Feng, Changda Gong, Jieyu Zhu, Guixia Liu
Unraveling the Ligand-Binding Sites of CYP3A4 by Molecular Dynamics Simulations with Solvent Probes. J. Chem. Inf. Model. 64(8): 3451-3464 (2024) - 2023
- [j47]Yimeng Wang, Mengting Huang, Hua Deng, Weihua Li, Zengrui Wu
Identification of vital chemical information via visualization of graph neural networks. Briefings Bioinform. 24(1) (2023) - [j46]Hua Deng, Meng Ding, Yimeng Wang, Weihua Li
ACP-MLC: A two-level prediction engine for identification of anticancer peptides and multi-label classification of their functional types. Comput. Biol. Medicine 158: 106844 (2023) - [j45]Chaofeng Lou, Hongbin Yang, Hua Deng, Mengting Huang, Weihua Li, Guixia Liu, Philip W. Lee, Yun Tang:
Chemical rules for optimization of chemical mutagenicity via matched molecular pairs analysis and machine learning methods. J. Cheminformatics 15(1): 35 (2023) - [j44]Moran Zhou, Jiamin Sun, Zhuohang Yu, Zengrui Wu, Weihua Li
Investigation of Anti-Alzheimer's Mechanisms of Sarsasapogenin Derivatives by Network-Based Combining Structure-Based Methods. J. Chem. Inf. Model. 63(9): 2881-2894 (2023) - [j43]Yanjun Feng, Changda Gong, Jieyu Zhu, Guixia Liu
Prediction of Sites of Metabolism of CYP3A4 Substrates Utilizing Docking-Derived Geometric Features. J. Chem. Inf. Model. 63(13): 4158-4169 (2023) - [j42]Lulu Zheng, Bin Zhu
Pharmaceutical Cocrystal Discovery via 3D-SMINBR: A New Network Recommendation Tool Augmented by 3D Molecular Conformations. J. Chem. Inf. Model. 63(14): 4301-4311 (2023) - 2022
- [j41]Zhuohang Yu, Zengrui Wu
ADENet: a novel network-based inference method for prediction of drug adverse events. Briefings Bioinform. 23(2) (2022) - [j40]Jiye Wang, Chaofeng Lou, Guixia Liu, Weihua Li, Zengrui Wu
Profiling prediction of nuclear receptor modulators with multi-task deep learning methods: toward the virtual screening. Briefings Bioinform. 23(5) (2022) - [j39]Yimeng Wang, Yaxin Gu, Chaofeng Lou, Yuning Gong, Zengrui Wu, Weihua Li, Yun Tang, Guixia Liu
A multitask GNN-based interpretable model for discovery of selective JAK inhibitors. J. Cheminformatics 14(1): 16 (2022) - [j38]Mengting Huang, Chaofeng Lou, Zengrui Wu, Weihua Li, Philip W. Lee, Yun Tang, Guixia Liu:
In silico prediction of UGT-mediated metabolism in drug-like molecules via graph neural network. J. Cheminformatics 14(1): 46 (2022) - [j37]Dongping Li, Kexin Jiang, Dan Teng
Discovery of New Estrogen-Related Receptor α Agonists via a Combination Strategy Based on Shape Screening and Ensemble Docking. J. Chem. Inf. Model. 62(3): 486-497 (2022) - [j36]Chaofeng Lou, Hongbin Yang
IDL-PPBopt: A Strategy for Prediction and Optimization of Human Plasma Protein Binding of Compounds via an Interpretable Deep Learning Method. J. Chem. Inf. Model. 62(11): 2788-2799 (2022) - [j35]Dan Teng
Mechanistic Studies on the Stereoselectivity of FFAR1 Modulators. J. Chem. Inf. Model. 62(15): 3664-3675 (2022) - 2021
- [j34]Yayuan Peng, Manjiong Wang, Yixiang Xu, Zengrui Wu, Jiye Wang, Chao Zhang, Guixia Liu, Weihua Li, Jian Li
Drug repositioning by prediction of drug's anatomical therapeutic chemical code via network-based inference approaches. Briefings Bioinform. 22(2): 2058-2072 (2021) - [j33]Zhuohang Yu, Zengrui Wu
MetaADEDB 2.0: a comprehensive database on adverse drug events. Bioinform. 37(15): 2221-2222 (2021) - [j32]Junhao Li, Yue Chen, Yun Tang
Homotropic Cooperativity of Midazolam Metabolism by Cytochrome P450 3A4: Insight from Computational Studies. J. Chem. Inf. Model. 61(5): 2418-2426 (2021) - [j31]Jiye Wang
Pathway-Based Drug Repurposing with DPNetinfer: A Method to Predict Drug-Pathway Associations via Network-Based Approaches. J. Chem. Inf. Model. 61(5): 2475-2485 (2021) - [j30]Zengrui Wu
Discovery of Natural Products Targeting NQO1 via an Approach Combining Network-Based Inference and Identification of Privileged Substructures. J. Chem. Inf. Model. 61(5): 2486-2498 (2021) - [j29]Lulu Zheng, Bin Zhu, Zengrui Wu
SMINBR: An Integrated Network and Chemoinformatics Tool Specialized for Prediction of Two-Component Crystal Formation. J. Chem. Inf. Model. 61(9): 4290-4302 (2021) - 2020
- [j28]Yue Chen, Junhao Li, Zengrui Wu, Guixia Liu
Computational Insight into the Allosteric Activation Mechanism of Farnesoid X Receptor. J. Chem. Inf. Model. 60(3): 1540-1550 (2020) - [j27]Dan Teng
Computational Insights into Molecular Activation and Positive Cooperative Mechanisms of FFAR1 Modulators. J. Chem. Inf. Model. 60(6): 3214-3230 (2020) - [j26]Zengrui Wu
NetInfer: A Web Server for Prediction of Targets and Therapeutic and Adverse Effects via Network-Based Inference Methods. J. Chem. Inf. Model. 60(8): 3687-3691 (2020) - [j25]Junhao Li, Yang Zhou
Dissecting the Structural Plasticity and Dynamics of Cytochrome P450 2B4 by Molecular Dynamics Simulations. J. Chem. Inf. Model. 60(10): 5026-5035 (2020)
2010 – 2019
- 2019
- [j24]Hongbin Yang
admetSAR 2.0: web-service for prediction and optimization of chemical ADMET properties. Bioinform. 35(6): 1067-1069 (2019) - [j23]Lixia Sun
In Silico Prediction of Endocrine Disrupting Chemicals Using Single-Label and Multilabel Models. J. Chem. Inf. Model. 59(3): 973-982 (2019) - [j22]Yingchun Cai, Hongbin Yang
Computational Prediction of Site of Metabolism for UGT-Catalyzed Reactions. J. Chem. Inf. Model. 59(3): 1085-1095 (2019) - [j21]Feixiong Cheng, Weihua Li, Yadi Zhou, Jie Shen, Zengrui Wu, Guixia Liu, Philip W. Lee, Yun Tang
Correction to "admetSAR: A Comprehensive Source and Free Tool for Assessment of Chemical ADMET Properties". J. Chem. Inf. Model. 59(11): 4959 (2019) - [j20]Yinyin Wang, Mohieddin Jafari
Predicting Meridian in Chinese traditional medicine using machine learning approaches. PLoS Comput. Biol. 15(11) (2019) - [j19]Xinzhe Xiao, Zehui Chen, Zengrui Wu, Tianduanyi Wang, Weihua Li, Guixia Liu, Bo Zhang, Yun Tang:
Insights into the antineoplastic mechanism of Chelidonium majus via systems pharmacology approach. Quant. Biol. 7(1): 42-53 (2019) - 2018
- [j18]Yingchun Cai
Multiclassification Prediction of Enzymatic Reactions for Oxidoreductases and Hydrolases Using Reaction Fingerprints and Machine Learning Methods. J. Chem. Inf. Model. 58(6): 1169-1181 (2018) - [j17]Hongbin Yang
ADMETopt: A Web Server for ADMET Optimization in Drug Design via Scaffold Hopping. J. Chem. Inf. Model. 58(10): 2051-2056 (2018) - 2017
- [j16]Zengrui Wu, Feixiong Cheng
SDTNBI: an integrated network and chemoinformatics tool for systematic prediction of drug-target interactions and drug repositioning. Briefings Bioinform. 18(2): 333-347 (2017) - [j15]Hanwen Du, Junhao Li, Yingchun Cai, Hongxiao Zhang, Guixia Liu, Yun Tang
Computational Investigation of Ligand Binding to the Peripheral Site in CYP3A4: Conformational Dynamics and Inhibitor Discovery. J. Chem. Inf. Model. 57(3): 616-626 (2017) - [j14]Jiansong Fang
Quantitative and Systems Pharmacology. 1. In Silico Prediction of Drug-Target Interactions of Natural Products Enables New Targeted Cancer Therapy. J. Chem. Inf. Model. 57(11): 2657-2671 (2017) - 2014
- [j13]Xiao Li
In Silico Prediction of Chemical Acute Oral Toxicity Using Multi-Classification Methods. J. Chem. Inf. Model. 54(4): 1061-1069 (2014) - 2013
- [j12]Feixiong Cheng
Adverse Drug Events: Database Construction and in Silico Prediction. J. Chem. Inf. Model. 53(4): 744-752 (2013) - [j11]Feixiong Cheng
Prediction of Polypharmacological Profiles of Drugs by the Integration of Chemical, Side Effect, and Therapeutic Space. J. Chem. Inf. Model. 53(4): 753-762 (2013) - 2012
- [j10]Feixiong Cheng
In Silico Assessment of Chemical Biodegradability. J. Chem. Inf. Model. 52(3): 655-669 (2012) - [j9]Guoping Hu, Guanglin Kuang
Performance Evaluation of 2D Fingerprint and 3D Shape Similarity Methods in Virtual Screening. J. Chem. Inf. Model. 52(5): 1103-1113 (2012) - [j8]Congying Xu, Feixiong Cheng
In silico Prediction of Chemical Ames Mutagenicity. J. Chem. Inf. Model. 52(11): 2840-2847 (2012) - [j7]Weihua Li, Jing Fu, Feixiong Cheng
Unbinding Pathways of GW4064 from Human Farnesoid X Receptor As Revealed by Molecular Dynamics Simulations. J. Chem. Inf. Model. 52(11): 3043-3052 (2012) - [j6]Feixiong Cheng
admetSAR: A Comprehensive Source and Free Tool for Assessment of Chemical ADMET Properties. J. Chem. Inf. Model. 52(11): 3099-3105 (2012) - [j5]Feixiong Cheng
Prediction of Drug-Target Interactions and Drug Repositioning via Network-Based Inference. PLoS Comput. Biol. 8(5) (2012) - 2011
- [j4]Feixiong Cheng
Classification of Cytochrome P450 Inhibitors and Noninhibitors Using Combined Classifiers. J. Chem. Inf. Model. 51(5): 996-1011 (2011) - [j3]Feixiong Cheng
Insights into Molecular Basis of Cytochrome P450 Inhibitory Promiscuity of Compounds. J. Chem. Inf. Model. 51(10): 2482-2495 (2011) - 2010
- [j2]Jie Shen, Feixiong Cheng, You Xu, Weihua Li, Yun Tang:
Estimation of ADME Properties with Substructure Pattern Recognition. J. Chem. Inf. Model. 50(6): 1034-1041 (2010) - [j1]Yaozong Li, Jie Shen, Xianqiang Sun, Weihua Li, Guixia Liu, Yun Tang:
Accuracy Assessment of Protein-Based Docking Programs against RNA Targets. J. Chem. Inf. Model. 50(6): 1134-1146 (2010)
Coauthor Index
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last updated on 2024-09-26 23:36 CEST by the dblp team
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