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Andrea M. Rocha
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2010 – 2019
- 2012
- [j4]Zhengzhang Chen
, Kanchana Padmanabhan, Andrea M. Rocha, Yekaterina Shpanskaya
Spice: discovery of phenotype-determining component interplays. BMC Syst. Biol. 6: 40 (2012) - [j3]Matthew C. Schmidt, Andrea M. Rocha
NIBBS-Search for Fast and Accurate Prediction of Phenotype-Biased Metabolic Systems. PLoS Comput. Biol. 8(5) (2012) - 2011
- [j2]Matthew C. Schmidt, Andrea M. Rocha, Kanchana Padmanabhan, Zhengzhang Chen
Efficient alpha, beta-motif Finder for Identification of Phenotype-related Functional Modules. BMC Bioinform. 12: 440 (2011) - [j1]William Hendrix, Andrea M. Rocha, Kanchana Padmanabhan, Alok N. Choudhary, Kathleen Scott, James R. Mihelcic, Nagiza F. Samatova:
DENSE: efficient and prior knowledge-driven discovery of phenotype-associated protein functional modules. BMC Syst. Biol. 5: 172 (2011) - [c3]Kevin A. Wilson, Andrea M. Rocha, Kanchana Padmanabhan, Kuangyu Wang, Zhengzhang Chen
Detecting Pathway Cross-Talks by Analyzing Conserved Functional Modules across Multiple Phenotype-Expressing Organisms. BIBM 2011: 443-449 - 2010
- [c2]William Hendrix, Andrea M. Rocha, Mark T. Elmore, Joe Trien, Nagiza F. Samatova:
Discovery of Enriched Biological Motifs Using Knowledge Priors with Application to Biohydrogen Production. BIOCOMP 2010: 17-23 - [c1]Wenbin Chen, Andrea M. Rocha, William Hendrix, Matthew C. Schmidt, Nagiza F. Samatova:
The Multiple Alignment Algorithm for Metabolic Pathways without Abstraction. ICDM Workshops 2010: 669-678
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