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Hosna Jabbari
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2020 – today
- 2024
- [j12]Mateo Gray
, Sebastian Will, Hosna Jabbari:
SparseRNAfolD: optimized sparse RNA pseudoknot-free folding with dangle consideration. Algorithms Mol. Biol. 19(1): 9 (2024) - [j11]Tara Newman
DinoKnot: Duplex Interaction of Nucleic Acids With PseudoKnots. IEEE ACM Trans. Comput. Biol. Bioinform. 21(3): 348-359 (2024) - 2023
- [j10]Luke Trinity
Shapify: Paths to SARS-CoV-2 frameshifting pseudoknot. PLoS Comput. Biol. 19(2) (2023) - [c10]Mateo Gray
SparseRNAFolD: Sparse RNA Pseudoknot-Free Folding Including Dangles. WABI 2023: 19:1-19:18 - 2022
- [j9]Raul I. Perez Martell, Alison Ziesel, Hosna Jabbari
Supervised promoter recognition: a benchmark framework. BMC Bioinform. 23(1): 118 (2022) - [j8]Mateo Gray
KnotAli: informed energy minimization through the use of evolutionary information. BMC Bioinform. 23(1): 159 (2022) - [j7]Majid Khabbazian, Hosna Jabbari
AI-powered aptamer generation. Nat. Comput. Sci. 2(6): 356-357 (2022) - [c9]Tristan Zaborniak, Juan Giraldo, Hausi A. Müller, Hosna Jabbari
A QUBO model of the RNA folding problem optimized by variational hybrid quantum annealing. QCE 2022: 174-185 - 2021
- [c8]Alison Ziesel, Hosna Jabbari:
Identification of conserved and evolving RNA secondary structures in SARS-CoV-2 and related viruses. CASCON 2021: 202-207 - [c7]Luke Trinity, Andrew Hollar, Haley Greenyer, Hosna Jabbari, Ulrike Stege:
Viz23: web server for visualization of gene expression and locational information. CASCON 2021: 268-273 - [c6]Luke Trinity, Lance Lansing, Hosna Jabbari
SARS-CoV-2 Ribosomal Frameshifting Pseudoknot: Detection of Inter-viral Structural Similarity. ICHI 2021: 451-460 - [c5]Tara Newman
In silico prediction of COVID-19 test efficiency with DinoKnot. ICHI 2021: 470-479
2010 – 2019
- 2018
- [j6]Hosna Jabbari
Knotty: efficient and accurate prediction of complex RNA pseudoknot structures. Bioinform. 34(22): 3849-3856 (2018) - 2017
- [c4]Hosna Jabbari
Sparsification Enables Predicting Kissing Hairpin Pseudoknot Structures of Long RNAs in Practice. WABI 2017: 12:1-12:13 - 2016
- [j5]Sebastian Will, Hosna Jabbari:
Sparse RNA folding revisited: space-efficient minimum free energy structure prediction. Algorithms Mol. Biol. 11: 7 (2016) - 2015
- [c3]Sebastian Will, Hosna Jabbari
Sparse RNA Folding Revisited: Space-Efficient Minimum Free Energy Prediction. WABI 2015: 257-270 - 2014
- [j4]Hosna Jabbari
A fast and robust iterative algorithm for prediction of RNA pseudoknotted secondary structures. BMC Bioinform. 15: 147 (2014)
2000 – 2009
- 2009
- [j3]Ho-Lin Chen
An O(n5) Algorithm for MFE Prediction of Kissing Hairpins and 4-Chains in Nucleic Acids. J. Comput. Biol. 16(6): 803-815 (2009) - [j2]Anne Condon, Hosna Jabbari
Computational prediction of nucleic acid secondary structure: Methods, applications, and challenges. Theor. Comput. Sci. 410(4-5): 294-301 (2009) - 2008
- [j1]Hosna Jabbari
Novel and Efficient RNA Secondary Structure Prediction Using Hierarchical Folding. J. Comput. Biol. 15(2): 139-163 (2008) - 2007
- [c2]Hosna Jabbari
A New Class of Cellular Automata. DSD 2007: 331-338 - [c1]Hosna Jabbari
HFold: RNA Pseudoknotted Secondary Structure Prediction Using Hierarchical Folding. WABI 2007: 323-334
Coauthor Index
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last updated on 2024-10-07 21:24 CEST by the dblp team
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