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Giovanni Paternostro
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2010 – 2019
- 2019
- [j9]Sergii Domanskyi, Anthony Szedlak, Nathaniel T Hawkins, Jiayin Wang, Giovanni Paternostro, Carlo Piermarocchi:
Polled Digital Cell Sorter (p-DCS): Automatic identification of hematological cell types from single cell RNA-sequencing clusters. BMC Bioinform. 20(1): 369:1-369:16 (2019) - [c1]Sergii Domanskyi, Alex Hakansson, Giovanni Paternostro, Carlo Piermarocchi:
Modeling disease progression in Multiple Myeloma with Hopfield networks and single-cell RNA-seq. BIBM 2019: 2129-2136 - 2017
- [j8]Anthony Szedlak, Spencer Sims, Nicholas Smith, Giovanni Paternostro, Carlo Piermarocchi:
Cell cycle time series gene expression data encoded as cyclic attractors in Hopfield systems. PLoS Comput. Biol. 13(11) (2017) - 2016
- [j7]Anthony Szedlak, Nicholas Smith, Li Liu, Giovanni Paternostro, Carlo Piermarocchi:
Evolutionary and Topological Properties of Genes and Community Structures in Human Gene Regulatory Networks. PLoS Comput. Biol. 12(6) (2016) - 2015
- [j6]Edison Ong, Anthony Szedlak, Yunyi Kang, Peyton Smith, Nicholas Smith, Madison McBride, Darren Finlay, Kristiina Vuori, James Mason, Edward D. Ball, Carlo Piermarocchi, Giovanni Paternostro:
A Scalable Method for Molecular Network Reconstruction Identifies Properties of Targets and Mutations in Acute Myeloid Leukemia. J. Comput. Biol. 22(4): 266-288 (2015) - 2014
- [j5]Trish P. Tran, Edison Ong, Andrew P. Hodges, Giovanni Paternostro, Carlo Piermarocchi:
Prediction of kinase inhibitor response using activity profiling, in vitro screening, and elastic net regression. BMC Syst. Biol. 8: 74 (2014)
2000 – 2009
- 2009
- [j4]Jacob D. Feala, Laurence Coquin, Dan Zhou, Gabriel G. Haddad, Giovanni Paternostro, Andrew D. McCulloch:
Metabolism as means for hypoxia adaptation: metabolic profiling and flux balance analysis. BMC Syst. Biol. 3: 91 (2009) - 2008
- [j3]Diego Calzolari, Stefania Bruschi, Laurence Coquin, Jennifer Schofield, Jacob D. Feala, John C. Reed, Andrew D. McCulloch, Giovanni Paternostro:
Search Algorithms as a Framework for the Optimization of Drug Combinations. PLoS Comput. Biol. 4(12) (2008) - 2006
- [j2]Luca Bertelli, Rita Cucchiara, Giovanni Paternostro, Andrea Prati:
A semi-automatic system for segmentation of cardiac M-mode images. Pattern Anal. Appl. 9(4): 293-306 (2006) - 2005
- [j1]Luca Ferrarini, Luca Bertelli, Jacob D. Feala, Andrew D. McCulloch, Giovanni Paternostro:
A more efficient search strategy for aging genes based on connectivity. Bioinform. 21(3): 338-348 (2005)
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