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Thomas Sauter
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2020 – today
- 2022
- [j14]Thomas Sauter, Tamara Bintener, Ali Kishk, Luana Presta, Tessy Prohaska, Daniel Guignard, Ni Zeng, Claudia Cipriani, Sundas Arshad, Thomas Pfau, Patricia Martins Conde, Maria Pires Pacheco:
Project-based learning course on metabolic network modelling in computational systems biology. PLoS Comput. Biol. 18(1) (2022) - 2021
- [j13]Apurva Badkas
, Sébastien De Landtsheer, Thomas Sauter
Topological network measures for drug repositioning. Briefings Bioinform. 22(4) (2021)
2010 – 2019
- 2019
- [c4]Vânia Cecchini, Thanh-Phuong Nguyen, Thomas Pfau, Sébastien De Landtsheer, Thomas Sauter:
An Efficient Machine Learning Method to Solve Imbalanced Data in Metabolic Disease Prediction. KSE 2019: 1-5 - [p1]Maria Pires Pacheco, Tamara Bintener, Thomas Sauter:
Towards the Integration of Metabolic Network Modelling and Machine Learning for the Routine Analysis of High-Throughput Patient Data. Automated Reasoning for Systems Biology and Medicine 2019: 401-424 - 2017
- [j12]Sébastien De Landtsheer, Panuwat Trairatphisan
FALCON: a toolbox for the fast contextualization of logical networks. Bioinform. 33(21): 3431-3436 (2017) - 2016
- [j11]Thomas Pfau, Maria Pires Pacheco
Towards improved genome-scale metabolic network reconstructions: unification, transcript specificity and beyond. Briefings Bioinform. 17(6): 1060-1069 (2016) - 2014
- [j10]Nikos Vlassis, Maria Pires Pacheco
Fast Reconstruction of Compact Context-Specific Metabolic Network Models. PLoS Comput. Biol. 10(1) (2014) - [j9]Fabian Konrath
Identification of New IκBα Complexes by an Iterative Experimental and Mathematical Modeling Approach. PLoS Comput. Biol. 10(3) (2014) - 2013
- [i1]Nikos Vlassis, Maria Pires Pacheco, Thomas Sauter:
Fast Reconstruction of Compact Context-Specific Metabolic Network Models. CoRR abs/1304.7992 (2013) - 2012
- [j8]Qixia Yuan, Panuwat Trairatphisan
Probabilistic Model Checking of the PDGF Signaling Pathway. Trans. Comp. Sys. Biology 14: 151-180 (2012) - 2011
- [j7]Sebastian Henkel, Thomas Nägele
A systems biology approach to analyse leaf carbohydrate metabolism in Arabidopsis thaliana. EURASIP J. Bioinform. Syst. Biol. 2011: 2 (2011) - [j6]Johannes Witt, Sandra Barisic, Oliver Sawodny, Michael Ederer, Dagmar Kulms, Thomas Sauter
Modeling time delay in the NFκB signaling pathway following low dose IL-1 stimulation. EURASIP J. Bioinform. Syst. Biol. 2011: 3 (2011) - [c3]Qixia Yuan, Jun Pang, Sjouke Mauw, Panuwat Trairatphisan, Monique Wiesinger, Thomas Sauter:
A Study of the PDGF Signaling Pathway with PRISM. CompMod 2011: 65-81
2000 – 2009
- 2009
- [j5]Johannes Witt, Sandra Barisic, Eva Schumann, Frank Allgöwer
Mechanism of PP2A-mediated IKKβ dephosphorylation: a systems biological approach. BMC Syst. Biol. 3: 71 (2009) - [j4]Rebekka Schlatter, Kathrin Schmich, Ima Avalos Vizcarra, Peter Scheurich, Thomas Sauter
ON/OFF and Beyond - A Boolean Model of Apoptosis. PLoS Comput. Biol. 5(12) (2009) - 2008
- [j3]Ronny Feuer, Michael Ederer, Ernst Dieter Gilles, Georg A. Sprenger, Oliver Sawodny, Thomas Sauter:
Analyse der evolutiven Adaptation am Beispiel einer pyruvat-auxotrophen Escherichia coli-Mutante (Analysis of the Evolutive Adaptation of a Pyruvate-auxotrophic Escherichia coli Mutant). Autom. 56(5): 257-268 (2008) - 2006
- [j2]Holger Conzelmann, Julio Saez-Rodriguez
A domain-oriented approach to the reduction of combinatorial complexity in signal transduction networks. BMC Bioinform. 7: 34 (2006) - 2004
- [c2]Rainer Schrapel, Thomas Sauter:
Praxisbericht: Horizontale und vertikale Integration am Beispiel des Aufragsmanagemenst bei der MCG der DaimlerChrysler AG. GI Jahrestagung (2) 2004: 86-90 - 2003
- [j1]Michael Ederer, Thomas Sauter, Eric Bullinger
An Approach for Dividing Models of Biological Reaction Networks into Functional Units. Simul. 79(12): 703-716 (2003) - [c1]Andreas Kremling, Katja Bettenbrock, Sophia Fischer, Martin Ginkel, Thomas Sauter, Ernst Dieter Gilles:
Towards Whole Cell "in Silico" Models for Cellular Systems: Model Set-up and Model Validation. POSTA 2003: 95-102
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