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Florence Tama
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2020 – today
- 2024
- [c5]Wenyang Zhao, Osamu Miyashita, Miki Nakano, Florence Tama:
Xphase3d: Memory-Distributed Phase Retrieval for Reconstructing Large-Scale 3D Density Maps of Biological Macromolecules. CLUSTER 2024: 394-402 - 2023
- [c4]Georgia Channing
, Ria Patel
Composable Workflow for Accelerating Neural Architecture Search Using In Situ Analytics for Protein Classification. ICPP 2023: 1 - 2022
- [c3]Paula Olaya, Silvina Caíno-Lores, Vanessa Lama, Ria Patel, Ariel Keller Rorabaugh, Osamu Miyashita, Florence Tama
Identifying Structural Properties of Proteins from X-ray Free Electron Laser Diffraction Patterns. e-Science 2022: 21-31 - [c2]Ria Patel, Ariel Keller Rorabaugh, Paula Olaya, Silvina Caíno-Lores, Georgia Channing
A Methodology to Generate Efficient Neural Networks for Classification of Scientific Datasets. e-Science 2022: 389-390 - 2021
- [j8]Sandhya P. Tiwari
Protocol for Retrieving Three-Dimensional Biological Shapes for a Few XFEL Single-Particle Diffraction Patterns. J. Chem. Inf. Model. 61(8): 4108-4119 (2021) - 2020
- [j7]Sandhya P. Tiwari
Computational Protocol for Assessing the Optimal Pixel Size to Improve the Accuracy of Single-particle Cryo-electron Microscopy Maps. J. Chem. Inf. Model. 60(5): 2570-2580 (2020)
2010 – 2019
- 2018
- [j6]Sandhya P. Tiwari
Searching for 3D structural models from a library of biological shapes using a few 2D experimental images. BMC Bioinform. 19(1): 320:1-320:14 (2018) - [j5]Qiyu Jin, Osamu Miyashita, Florence Tama
Poisson image denoising by piecewise principal component analysis and its application in single-particle X-ray diffraction imaging. IET Image Process. 12(12): 2264-2274 (2018) - 2017
- [j4]Osamu Miyashita, Chigusa Kobayashi, Takaharu Mori
Flexible fitting to cryo-EM density map using ensemble molecular dynamics simulations. J. Comput. Chem. 38(16): 1447-1461 (2017) - 2014
- [c1]Qiyu Jin, Carlos Oscar Sánchez Sorzano
Elastic image registration to fully explore macromolecular dynamics by electron microscopy. ICIP 2014: 2075-2079 - 2013
- [j3]Rubén Nogales-Cadenas, Slavica Jonic
3DEM Loupe: analysis of macromolecular dynamics using structures from electron microscopy. Nucleic Acids Res. 41(Webserver-Issue): 363-367 (2013) - [j2]Joseph L. Baker
Steered Molecular Dynamics Simulations of a Type IV Pilus Probe Initial Stages of a Force-Induced Conformational Transition. PLoS Comput. Biol. 9(4) (2013)
2000 – 2009
- 2004
- [j1]Willy Wriggers, Pablo Chacón
Topology representing neural networks reconcile biomolecular shape, structure, and dynamics. Neurocomputing 56: 365-379 (2004)
Coauthor Index
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