default search action
David Gavaghan
Person information
- affiliation: University of Oxford, UK
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2024
- [i4]Kit Gallagher
, Richard Creswell, Ben Lambert, Martin Robinson, Chon Lok Lei, Gary R. Mirams, David J. Gavaghan:
Ten simple rules for teaching sustainable software engineering. CoRR abs/2402.04722 (2024) - 2023
- [j22]Chon Lok Lei
Model-driven optimal experimental design for calibrating cardiac electrophysiology models. Comput. Methods Programs Biomed. 240: 107690 (2023) - [j21]David Augustin
Filter inference: A scalable nonlinear mixed effects inference approach for snapshot time series data. PLoS Comput. Biol. 19(5) (2023) - [i3]Richard Creswell, Katherine M. Shepherd, Ben Lambert, Gary R. Mirams, Chon Lok Lei, Simon Tavener, Martin Robinson, David J. Gavaghan:
Understanding the impact of numerical solvers on inference for differential equation models. CoRR abs/2307.00749 (2023) - 2022
- [c25]Aditi Agrawal
Modelling the Effect of Intracellular Calcium in the Rundown of L-Type Calcium Current. CinC 2022: 1-4 - [c24]Yann-Stanislas H. M. Barral, Liudmila Polonchuk, Gary R. Mirams, Michael Clerx, Guy Page, Katrina Sweat, Najah Abi-Gerges, Ken Wang, David J. Gavaghan:
Normalisation of Action Potential Data Recorded with Sharp Electrodes Maximises Its Utility for Model Development. CinC 2022: 1-4 - 2021
- [j20]Graham Lee, Sebastian Bacon, Ian Bush, Laura Fortunato, David Gavaghan, Thibault Lestang, Caroline Morton, Martin Robinson, Philippe Rocca-Serra, Susanna-Assunta Sansone, Helena Webb
Barely sufficient practices in scientific computing. Patterns 2(2): 100206 (2021) - 2020
- [j19]Fergus R. Cooper
Chaste: Cancer, Heart and Soft Tissue Environment. J. Open Source Softw. 5(47): 1848 (2020) - [i2]Thomas Foster, Chon Lok Lei, Martin Robinson, David Gavaghan, Ben Lambert:
Model Evidence with Fast Tree Based Quadrature. CoRR abs/2005.11300 (2020)
2010 – 2019
- 2018
- [i1]Michael Clerx, Martin Robinson, Ben Lambert, Chon Lok Lei, Sanmitra Ghosh, Gary R. Mirams, David J. Gavaghan:
Probabilistic Inference on Noisy Time Series (PINTS). CoRR abs/1812.07388 (2018) - 2017
- [j18]Sophie K. Kay
The role of the Hes1 crosstalk hub in Notch-Wnt interactions of the intestinal crypt. PLoS Comput. Biol. 13(2) (2017) - [j17]James M. Osborne
Comparing individual-based approaches to modelling the self-organization of multicellular tissues. PLoS Comput. Biol. 13(2) (2017) - [j16]Samuel Demharter
Ten simple rules for surviving an interdisciplinary PhD. PLoS Comput. Biol. 13(5) (2017) - 2016
- [c23]Ross Johnstone, Rémi Bardenet, David Gavaghan, Liudmila Polonchuk, Mark Davies, Gary R. Mirams:
Hierarchical Bayesian Modelling of Variability and Uncertainty in Synthetic Action Potential Traces. CinC 2016 - 2015
- [j15]Tom Doel
Review of automatic pulmonary lobe segmentation methods from CT. Comput. Medical Imaging Graph. 40: 13-29 (2015) - [j14]Bernhard Knapp, Rémi Bardenet, Miguel O. Bernabeu, Rafel Bordas
Ten Simple Rules for a Successful Cross-Disciplinary Collaboration. PLoS Comput. Biol. 11(4) (2015) - 2014
- [j13]Thomas A. Dunton, Joseph E. Goose, David J. Gavaghan
The Free Energy Landscape of Dimerization of a Membrane Protein, NanC. PLoS Comput. Biol. 10(1) (2014) - [j12]James M. Osborne
Ten Simple Rules for Effective Computational Research. PLoS Comput. Biol. 10(3) (2014) - [c22]Mandeep Gill, Steve McKeever, David Gavaghan:
Model Composition for Biological Mathematical Systems. MODELSWARD 2014: 217-224 - 2013
- [j11]Anna Sher, Ken Wang, Andrew J. Wathen, Philip John Maybank, Gary R. Mirams
A local sensitivity analysis method for developing biological models with identifiable parameters: Application to cardiac ionic channel modelling. Future Gener. Comput. Syst. 29(2): 591-598 (2013) - [j10]Gary R. Mirams
Chaste: An Open Source C++ Library for Computational Physiology and Biology. PLoS Comput. Biol. 9(3) (2013) - 2012
- [j9]Sara-Jane Dunn, Paul L. Appleton, Scott A. Nelson, Inke S. Näthke
A Two-Dimensional Model of the Colonic Crypt Accounting for the Role of the Basement Membrane and Pericryptal Fibroblast Sheath. PLoS Comput. Biol. 8(5) (2012) - [j8]Rafel Bordas
A Bidomain Model of the Ventricular Specialized Conduction System of the Heart. SIAM J. Appl. Math. 72(5): 1618-1643 (2012) - [j7]Boguslaw Obara, Mark D. Fricker
Contrast-Independent Curvilinear Structure Detection in Biomedical Images. IEEE Trans. Image Process. 21(5): 2572-2581 (2012) - [c21]Matthew Gibb, Rebecca Burton
Resolving the Three-Dimensional Histology of the Heart. CMSB 2012: 2-16 - [c20]Tom Doel
Pulmonary lobe segmentation from CT images using fissureness, airways, vessels and multilevel B-splines. ISBI 2012: 1491-1494 - [c19]Mandeep Gill, Steve McKeever, David Gavaghan:
Modular mathematical modelling of biological systems. SpringSim (TMS-DEVS) 2012: 36 - [c18]Mandeep Gill, Steve McKeever, David Gavaghan
Modules for Reusable and Collaborative Modelling of Biological Mathematical Systems. WETICE 2012: 250-255 - 2011
- [c17]Ilyas E. Karadag, Martin J. Bishop
Regionally Optimised Mathematical Models of Cardiac Myocyte Orientation in Rat Hearts. FIMH 2011: 294-301 - 2010
- [j6]Jonathan Cooper
A Posteriori Error Analysis for the Use of Lookup Tables in Cardiac Electrophysiology Simulations. SIAM J. Sci. Comput. 32(4): 2167-2189 (2010) - [c16]Andrew Simpson
On the Secure Sharing and Aggregation of Data to Support Systems Biology Research. DILS 2010: 58-73 - [c15]Anna Sher, Ken Wang, Andrew J. Wathen, Gary R. Mirams
A Local Sensitivity Analysis Method for Developing Biological Models with Identifiable Parameters: Application to L-type Calcium Channel Modelling. eScience 2010: 176-181 - [c14]Colin Enticott, Thomas C. Peachey, David Abramson
Electrochemical Parameter Optimization Using Scientific Workflows. eScience 2010: 324-330
2000 – 2009
- 2009
- [j5]Joe Pitt-Francis
Chaste: A test-driven approach to software development for biological modelling. Comput. Phys. Commun. 180(12): 2452-2471 (2009) - [c13]Martin J. Bishop
Comparison of Rule-Based and DTMRI-Derived Fibre Architecture in a Whole Rat Ventricular Computational Model. FIMH 2009: 87-96 - 2008
- [j4]Pras Pathmanathan, David Gavaghan
Predicting Tumor Location by Modeling the Deformation of the Breast. IEEE Trans. Biomed. Eng. 55(10): 2471-2480 (2008) - [c12]Anna Sher, David Abramson
Incorporating Local Ca2+ Dynamics into Single Cell Ventricular Models. ICCS (1) 2008: 66-75 - [c11]Michal Plotkowiak, Blanca Rodríguez, Gernot Plank
High Performance Computer Simulations of Cardiac Electrical Function Based on High Resolution MRI Datasets. ICCS (1) 2008: 571-580 - 2007
- [j3]Sharon Lloyd, David Gavaghan
Integrative Biology - the challenges of developing a collaborative research environment for heart and cancer modelling. Future Gener. Comput. Syst. 23(3): 457-465 (2007) - [c10]Tahier Mansoori, Gernot Plank
An Iterative Method for Registration of High-Resolution Cardiac Histoanatomical and Mri Images. ISBI 2007: 572-575 - 2006
- [c9]Mark Slaymaker
A Prototype Infrastructure for the Secure Aggregation of Imaging and Pathology Data for Colorectal Cancer Care. CBMS 2006: 63-68 - [c8]Martin J. Bishop
Modulation of Shock-End Virtual Electrodoe Polarisation as a Direct Result of 3D Fluorescent Photon Scattering. EMBC 2006: 1556-1559 - [c7]Blanca Rodríguez
Vulnerability to electric shocks in the regionally-ischemic ventricles. EMBC 2006: 2280-2283 - [c6]Thushka Maharaj, Blanca Rodríguez
Transmural electrophysiological heterogeneities in action potential duration increase the upper limit of vulnerability. EMBC 2006: 4043-4046 - 2005
- [j2]Jonathan P. Whiteley, David Gavaghan
Oxygen transport to muscle tissue where regions of low oxygen tension exist. Math. Comput. Model. 42(9-10): 1113-1122 (2005) - [c5]R. H. J. Begent, J. Michael Brady, Anthony Finkelstein, David Gavaghan
Challenges of Ultra Large Scale Integration of Biomedical Computing Systems. CBMS 2005: 64-69 - 2004
- [c4]Pras Pathmanathan, David Gavaghan
Predicting Tumour Location by Simulating Large Deformations of the Breast Using a 3D Finite Element Model and Nonlinear Elasticity. MICCAI (2) 2004: 217-224 - 2002
- [j1]Darragh McInerney, David Gavaghan
The Dynamics and Pinning of a Spike for a Reaction-Diffusion System. SIAM J. Appl. Math. 62(4): 1297-1328 (2002) - [c3]Ken W. Brodlie, Jason D. Wood, David A. Duce, Julian R. Gallop, David Gavaghan, Michael B. Giles, S. Hague, Jeremy Walton, M. Rudgyard, Brian Collins, J. Ibbotson, Alan Knox:
XML for Visualization. EuroWeb 2002 - [c2]Dave Stainforth, Jamie Kettleborough, Andrew P. Martin, Andrew Simpson, R. Gillis, A. Akkas, R. Gault, Mat Collins, David Gavaghan, Myles Allen:
Climateprediction.net: Design Principles for Publicresource Modeling Research. IASTED PDCS 2002: 32-38 - 2000
- [c1]Ljupco Todorovski, Saso Dzeroski, Ashwin Srinivasan, Jonathan P. Whiteley, David Gavaghan:
Discovering the Structure of Partial Differential Equations from Example Behaviour. ICML 2000: 991-998
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from ,
, and
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and
to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from .
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-10-07 21:15 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by: