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Cosmin Adrian Bejan

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2020 – today

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2024
[j19]
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Cosmin Adrian Bejan, Jordan D. Charles:
Animal design advantage from the analogy between friction and body heat loss. Biosyst. 235: 105096 (2024)
[j18]
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Siwei Zhang, Nick Strayer, Tess Vessels, Karmel Choi, Geoffrey W. Wang, Yajing Li, Cosmin Adrian Bejan, Ryan S. Hsi, Alex Bick, Digna R. Velez Edwards, Michael R. Savona, Elizabeth J. Phillips, Jill M. Pulley, Wesley H. Self, Consuelo H. Wilkins, Dan M. Roden, Jordan W. Smoller, Douglas M. Ruderfer, Yaomin Xu:
PheMIME: an interactive web app and knowledge base for phenome-wide, multi-institutional multimorbidity analysis. J. Am. Medical Informatics Assoc. 31(11): 2440-2446 (2024)
2023
[j17]
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Nick Strayer, Siwei Zhang, Lydia Yao, Tess Vessels, Cosmin Adrian Bejan, Ryan S. Hsi, Jana K. Shirey-Rice, Justin M. Balko, Douglas B. Johnson, Elizabeth J. Phillips, Alex Bick, Todd L. Edwards, Digna R. Velez Edwards, Jill M. Pulley, Quinn Stanton Wells, Michael R. Savona, Nancy J. Cox, Dan M. Roden, Douglas M. Ruderfer, Yaomin Xu:
Interactive network-based clustering and investigation of multimorbidity association matrices with associationSubgraphs. Bioinform. 39(1) (2023)
[j16]
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Cosmin Adrian Bejan:
Perfection is the enemy of evolution. Biosyst. 229: 104917 (2023)
2022
[j15]
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Cosmin Adrian Bejan:
Evolution, physics, and education. Biosyst. 215-216: 104663 (2022)
2021
[j14]
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T. J. Sauer, Ehsan Samei, Cosmin Adrian Bejan:
Cell and extracellular matrix growth theory and its implications for tumorigenesis. Biosyst. 201: 104331 (2021)
[j13]
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Christos A. Makridis, David Y. Zhao, Cosmin Adrian Bejan, Gil Alterovitz:
Leveraging machine learning to characterize the role of socio-economic determinants on physical health and well-being among veterans. Comput. Biol. Medicine 133: 104354 (2021)
[j12]
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Elizabeth McNeer, Cole Beck, Hannah L. Weeks, Michael L. Williams, Nathan T. James, Cosmin Adrian Bejan, Leena Choi:
Building longitudinal medication dose data using medication information extracted from clinical notes in electronic health records. J. Am. Medical Informatics Assoc. 28(4): 782-790 (2021)
[j11]
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Sarah DeLozier, Sarah Bland, Melissa McPheeters, Quinn Stanton Wells, Eric Farber-Eger, Cosmin Adrian Bejan, Daniel Fabbri, S. Trent Rosenbloom, Dan M. Roden, Kevin B. Johnson, Wei-Qi Wei, Josh F. Peterson, Lisa Bastarache:
Phenotyping coronavirus disease 2019 during a global health pandemic: Lessons learned from the characterization of an early cohort. J. Biomed. Informatics 117: 103777 (2021)
2020
[j10]
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Cosmin Adrian Bejan:
Human evolution is biological & technological evolution. Biosyst. 195: 104156 (2020)
[j9]
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Cosmin Adrian Bejan:
Freedom and evolution in the dynamics of social systems. Biosyst. 195: 104158 (2020)
[j8]
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Hannah L. Weeks, Cole Beck, Elizabeth McNeer, Michael L. Williams, Cosmin Adrian Bejan, Joshua C. Denny, Leena Choi:
medExtractR: A targeted, customizable approach to medication extraction from electronic health records. J. Am. Medical Informatics Assoc. 27(3): 407-418 (2020)

2010 – 2019

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2019
[c24]
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Hannah L. Weeks, Cole Beck, Elizabeth McNeer, Cosmin Adrian Bejan, Joshua C. Denny, Leena Choi:
medExtractR: A medication extraction algorithm for electronic health records using the R programming language. AMIA 2019
[c23]
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David A. Dorr, Cosmin Adrian Bejan, Christie Pizzimenti, Sumeet Singh, Matt Storer, Ana R. Quiñones:
Identifying Patients with Significant Problems Related to Social Determinants of Health with Natural Language Processing. MedInfo 2019: 1456-1457
2018
[j7]
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Cosmin Adrian Bejan, John Angiolillo, Douglas Conway, Robertson Nash, Jana Shirey-Rice, Loren Lipworth-Elliot, Robert M. Cronin, Jill M. Pulley, Sunil Kripalani, Shari Barkin, Kevin B. Johnson, Joshua C. Denny:
Mining 100 million notes to find homelessness and adverse childhood experiences: 2 case studies of rare and severe social determinants of health in electronic health records. J. Am. Medical Informatics Assoc. 25(1): 61-71 (2018)
2017
[c22]
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Cosmin Adrian Bejan, John Angiolillo, Douglas Conway, Robertson Nash, Jana Shirey-Rice, Loren Lipworth-Elliot, Robert M. Cronin, Jill M. Pulley, Sunil Kripalani, Shari Barkin, Kevin B. Johnson, Joshua C. Denny:
Large-Scale Text Mining of Social Determinants from Electronic Health Records: Case Studies of Homelessness and Adverse Childhood Experiences. AMIA 2017
[c21]
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Cosmin Adrian Bejan, Joshua C. Denny:
A Simple and Efficient Method for the Management of Multiple Electronic Health Record-Driven Phenotype Projects. AMIA 2017
2015
[j6]
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Huan Mo, William K. Thompson, Luke V. Rasmussen, Jennifer A. Pacheco, Guoqian Jiang, Richard C. Kiefer, Qian Zhu, Jie Xu, Enid N. H. Montague, David S. Carrell, Todd Lingren, Frank D. Mentch, Yizhao Ni, Firas H. Wehbe, Peggy L. Peissig, Gerard Tromp, Eric B. Larson, Christopher G. Chute, Jyotishman Pathak, Joshua C. Denny, Peter Speltz, Abel N. Kho, Gail P. Jarvik, Cosmin Adrian Bejan, Marc S. Williams, Kenneth Borthwick, Terrie E. Kitchner, Dan M. Roden, Paul A. Harris:
Desiderata for computable representations of electronic health records-driven phenotype algorithms. J. Am. Medical Informatics Assoc. 22(6): 1220-1230 (2015)
[j5]
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Cosmin Adrian Bejan, Wei-Qi Wei, Joshua C. Denny:
Assessing the role of a medication-indication resource in the treatment relation extraction from clinical text. J. Am. Medical Informatics Assoc. 22(e1): e162-e176 (2015)
[j4]
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You Chen, Joydeep Ghosh, Cosmin Adrian Bejan, Carl A. Gunter, Siddharth Gupta, Abel N. Kho, David M. Liebovitz, Jimeng Sun, Joshua C. Denny, Bradley A. Malin:
Building bridges across electronic health record systems through inferred phenotypic topics. J. Biomed. Informatics 55: 82-93 (2015)
2014
[j3]
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Cosmin Adrian Bejan, Sanda M. Harabagiu:
Unsupervised Event Coreference Resolution. Comput. Linguistics 40(2): 311-347 (2014)
[c20]
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Cosmin Adrian Bejan, Joshua C. Denny:
Learning to Identify Treatment Relations in Clinical Text. AMIA 2014
2013
[j2]
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Cosmin Adrian Bejan, Lucy Vanderwende, Fei Xia, Meliha Yetisgen-Yildiz:
Assertion modeling and its role in clinical phenotype identification. J. Biomed. Informatics 46(1): 68-74 (2013)
[c19]
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Cosmin Adrian Bejan, Lucy Vanderwende, Heather L. Evans, Mark M. Wurfel, Meliha Yetisgen-Yildiz:
On-time clinical phenotype prediction based on narrative reports. AMIA 2013
[c18]
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Meliha Yetisgen-Yildiz, Cosmin Bejan, Mark M. Wurfel:
Identification of Patients with Acute Lung Injury from Free-Text Chest X-Ray Reports. BioNLP@ACL 2013: 10-17
2012
[j1]
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Cosmin Adrian Bejan, Fei Xia, Lucy Vanderwende, Mark M. Wurfel, Meliha Yetisgen-Yildiz:
Pneumonia identification using statistical feature selection. J. Am. Medical Informatics Assoc. 19(5): 817-823 (2012)
[c17]
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Cosmin Adrian Bejan, Lucy Vanderwende, Mark M. Wurfel, Meliha Yetisgen-Yildiz:
Assessing Pneumonia Identification from Time-Ordered Narrative Reports. AMIA 2012
2011
[c16]
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Andrew S. Gordon, Cosmin Adrian Bejan, Kenji Sagae:
Commonsense Causal Reasoning Using Millions of Personal Stories. AAAI 2011: 1180-1185
[c15]
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Melissa Roemmele, Cosmin Adrian Bejan, Andrew S. Gordon:
Choice of Plausible Alternatives: An Evaluation of Commonsense Causal Reasoning. AAAI Spring Symposium: Logical Formalizations of Commonsense Reasoning 2011
2010
[c14]
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Cosmin Adrian Bejan, Sanda M. Harabagiu:
Unsupervised Event Coreference Resolution with Rich Linguistic Features. ACL 2010: 1412-1422
[c13]
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Bryan Rink, Cosmin Adrian Bejan, Sanda M. Harabagiu:
Learning Textual Graph Patterns to Detect Causal Event Relations. FLAIRS 2010
[c12]
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Kirk Roberts, Cosmin Adrian Bejan, Sanda M. Harabagiu:
Toponym Disambiguation Using Events. FLAIRS 2010
[c11]
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Kirk Roberts, Srikanth Gullapalli, Cosmin Adrian Bejan, Sanda M. Harabagiu:
A Linguistic Resource for Semantic Parsing of Motion Events. LREC 2010

2000 – 2009

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2009
[c10]
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Cosmin Adrian Bejan, Matthew Titsworth, Andrew Hickl, Sanda M. Harabagiu:
Nonparametric Bayesian Models for Unsupervised Event Coreference Resolution. NIPS 2009: 73-81
2008
[c9]
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Cosmin Adrian Bejan, Sanda M. Harabagiu:
Using Clustering Methods for Discovering Event Structures. AAAI 2008: 1776-1777
[c8]
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Cosmin Adrian Bejan:
Unsupervised Discovery of Event Scenarios from Texts. FLAIRS 2008: 124-129
[c7]
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Cosmin Adrian Bejan, Sanda M. Harabagiu:
A Linguistic Resource for Discovering Event Structures and Resolving Event Coreference. LREC 2008
2007
[c6]
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Cosmin Adrian Bejan:
Deriving Chronological Information from Texts through a Graph-Based Algorithm. FLAIRS 2007: 259-260
[c5]
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Cosmin Adrian Bejan, Chris Hathaway:
UTD-SRL: A Pipeline Architecture for Extracting Frame Semantic Structures. SemEval@ACL 2007: 460-463
2006
[c4]
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Sanda M. Harabagiu, Cosmin Adrian Bejan:
An Answer Bank for Temporal Inference. LREC 2006: 741-746
2005
[c3]
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Sanda M. Harabagiu, Cosmin Adrian Bejan, Paul Morarescu:
Shallow Semantics for Relation Extraction. IJCAI 2005: 1061-1066
2004
[c2]
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Alessandro Moschitti, Cosmin Adrian Bejan:
A Semantic Kernel for Predicate Argument Classification. CoNLL 2004: 17-24
[c1]
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Cosmin Adrian Bejan, Alessandro Moschitti, Paul Morarescu, Gabriel Nicolae, Sanda M. Harabagiu:
Semantic parsing based on FrameNet. SENSEVAL@ACL 2004

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