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Yanbin Yin
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2020 – today
- 2024
- [j27]Xiangxin Zhan, Yanbin Yin
, Han Zhang
BERMAD: batch effect removal for single-cell RNA-seq data using a multi-layer adaptation autoencoder with dual-channel framework. Bioinform. 40(3) (2024) - [j26]Minghe Li, Huike Guo, Keao Wang, Chuanze Kang, Yanbin Yin, Han Zhang
AVBAE-MODFR: A novel deep learning framework of embedding and feature selection on multi-omics data for pan-cancer classification. Comput. Biol. Medicine 177: 108614 (2024) - [j25]Chuanze Kang
A Dual-Modality Complex-Valued Fusion Method for Predicting Side Effects of Drug-Drug Interactions Based on Graph Neural Network. IEEE J. Biomed. Health Informatics 28(10): 6212-6224 (2024) - 2023
- [j24]Bowen Yang, Minal Khatri, Jinfang Zheng
Genome mining for anti-CRISPR operons using machine learning. Bioinform. 39(5) (2023) - [j23]Mingjing Han, Han Zhang
Semantic-guided graph neural network for heterogeneous graph embedding. Expert Syst. Appl. 232: 120810 (2023) - [j22]Jinfang Zheng
dbCAN-seq update: CAZyme gene clusters and substrates in microbiomes. Nucleic Acids Res. 51(D1): 557-563 (2023) - [j21]Jinfang Zheng
dbCAN3: automated carbohydrate-active enzyme and substrate annotation. Nucleic Acids Res. 51(W1): 115-121 (2023) - [c9]Xiongwen Quan, Mingjing Han, Xia Guo, Zeyuan Li, Han Zhang, Yanbin Yin:
Unsupervised Feature Selection by Fusing Spectral Clustering and Locality Preserving Projection. BIBM 2023: 1400-1405 - [c8]Mingjing Han, Yanbin Yin, Han Zhang, Huan Wang:
Hierarchical Semantic Augmentation Graph Neural Network for Drug-Disease Association Prediction. BIBM 2023: i-viii - [i1]Ved Piyush, Yuchen Yan, Yuzhen Zhou, Yanbin Yin, Souparno Ghosh:
A Matrix Ensemble Kalman Filter-based Multi-arm Neural Network to Adequately Approximate Deep Neural Networks. CoRR abs/2307.10436 (2023) - 2022
- [j20]Chuanze Kang, Han Zhang
LR-GNN: a graph neural network based on link representation for predicting molecular associations. Briefings Bioinform. 23(1) (2022) - [j19]Wei Li
MGEGFP: a multi-view graph embedding method for gene function prediction based on adaptive estimation with GCN. Briefings Bioinform. 23(5) (2022) - [j18]Tang Li, Yanbin Yin:
Critical assessment of pan-genomic analysis of metagenome-assembled genomes. Briefings Bioinform. 23(6) (2022) - [j17]Xiao Wang, Jia Wang, Han Zhang
HDMC: a novel deep learning-based framework for removing batch effects in single-cell RNA-seq data. Bioinform. 38(5): 1295-1303 (2022) - [c7]Wanwan Huang, Han Zhang, Zeyuan Li, Yanbin Yin:
Mutual Information Estimation-Based Disentangled Representation Network for Medical Image Fusion. BIBM 2022: 991-998 - 2021
- [j16]Zhuangwei Shi, Han Zhang, Chen Jin, Xiongwen Quan
A representation learning model based on variational inference and graph autoencoder for predicting lncRNA-disease associations. BMC Bioinform. 22(1): 136 (2021) - [j15]Catherine Ausland, Jinfang Zheng
dbCAN-PUL: a database of experimentally characterized CAZyme gene clusters and their substrates. Nucleic Acids Res. 49(Database-Issue): D523-D528 (2021) - [j14]Le Huang
AcrDB: a database of anti-CRISPR operons in prokaryotes and viruses. Nucleic Acids Res. 49(Database-Issue): D622-D629 (2021) - [c6]Chen Jin, Zhuangwei Shi, Han Zhang, Yanbin Yin:
Predicting lncRNA-protein interactions based on graph autoencoders and collaborative training. BIBM 2021: 38-43 - [c5]Wei Li
Adversarial Dual-Channel Variational Graph Autoencoder for Synthetic Lethality Prediction in Human Cancers. BIBM 2021: 444-449 - 2020
- [j13]Jing Xu, Han Zhang
eCAMI: simultaneous classification and motif identification for enzyme annotation. Bioinform. 36(7): 2068-2075 (2020) - [j12]Xiao Wang, Haidong Yi, Jia Wang, Zhandong Liu
GDASC: a GPU parallel-based web server for detecting hidden batch factors. Bioinform. 36(14): 4211-4213 (2020) - [j11]Haidong Yi, Le Huang
AcrFinder: genome mining anti-CRISPR operons in prokaryotes and their viruses. Nucleic Acids Res. 48(Webserver-Issue): W358-W365 (2020) - [c4]Wei Li
Bayesian Multi-scale Convolutional Neural Network for Motif Occupancy Identification. BIBM 2020: 293-298
2010 – 2019
- 2019
- [j10]Xin Su, Jing Xu, Yanbin Yin
Antimicrobial peptide identification using multi-scale convolutional network. BMC Bioinform. 20(1): 730 (2019) - [c3]Yanbin Yin, Fang Yang, Xunchun Li, Changyong Pan:
Genetic Algorithm Based Optimization Method of Single Frequency Network Planning for DTMB. BMSB 2019: 1-5 - 2018
- [j9]Le Huang
dbCAN-seq: a database of carbohydrate-active enzyme (CAZyme) sequence and annotation. Nucleic Acids Res. 46(Database-Issue): D516-D521 (2018) - [j8]Han Zhang
dbCAN2: a meta server for automated carbohydrate-active enzyme annotation. Nucleic Acids Res. 46(Webserver-Issue): W95-W101 (2018) - 2016
- [j7]Alexander Ekstrom, Yanbin Yin
ORFanFinder: automated identification of taxonomically restricted orphan genes. Bioinform. 32(13): 2053-2055 (2016) - [j6]Deng-Shan Wang, Yanbin Yin:
Symmetry analysis and reductions of the two-dimensional generalized Benney system via geometric approach. Comput. Math. Appl. 71(3): 748-757 (2016) - 2014
- [j5]Alexander Ekstrom, Rahil Taujale, Nathan McGinn, Yanbin Yin
PlantCAZyme: a database for plant carbohydrate-active enzymes. Database J. Biol. Databases Curation 2014 (2014) - 2013
- [j4]Qin Ma
An integrated toolkit for accurate prediction and analysis of cis-regulatory motifs at a genome scale. Bioinform. 29(18): 2261-2268 (2013) - 2012
- [j3]Yanbin Yin
dbCAN: a web resource for automated carbohydrate-active enzyme annotation. Nucleic Acids Res. 40(Web-Server-Issue): 445-451 (2012) - 2011
- [c2]Keqian Yan, Wenbo Ding, Liwei Zhang, Yanbin Yin, Fang Yang, Chang-Yong Pan:
Measurement and prediction of DTMB reception quality in single frequency networks. IWCMC 2011: 936-940 - 2010
- [j2]Wen-Chi Chou
GolgiP: prediction of Golgi-resident proteins in plants. Bioinform. 26(19): 2464-2465 (2010)
2000 – 2009
- 2005
- [j1]Yunjia Chen
SPD - a web-based secreted protein database. Nucleic Acids Res. 33(Database-Issue): 169-173 (2005) - 2004
- [c1]Bin Wang, Zhuoqun Xu, Cheng Xu, Yanbin Yin, Wenkui Ding, Huashan Yu:
A Study of Gridifying Scientific Computing Legacy Codes. GCC 2004: 404-412
Coauthor Index
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last updated on 2024-10-23 20:31 CEST by the dblp team
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