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Zuobai Zhang
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2020 – today
- 2024
- [j4]Zuobai Zhang, Wanyue Xu, Zhongzhi Zhang, Guanrong Chen:
Opinion dynamics in social networks incorporating higher-order interactions. Data Min. Knowl. Discov. 38(6): 4001-4023 (2024) - [c15]Arian Rokkum Jamasb, Alex Morehead, Chaitanya K. Joshi, Zuobai Zhang, Kieran Didi, Simon V. Mathis, Charles Harris, Jian Tang, Jianlin Cheng, Pietro Lio, Tom L. Blundell:
Evaluating Representation Learning on the Protein Structure Universe. ICLR 2024 - [c14]Jiarui Lu, Bozitao Zhong, Zuobai Zhang, Jian Tang:
Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling. ICLR 2024 - [i19]Zuobai Zhang, Jiarui Lu, Vijil Chenthamarakshan, Aurélie C. Lozano, Payel Das, Jian Tang:
Structure-Informed Protein Language Model. CoRR abs/2402.05856 (2024) - [i18]Zuobai Zhang, Jiarui Lu, Vijil Chenthamarakshan, Aurélie C. Lozano, Payel Das, Jian Tang:
ProtIR: Iterative Refinement between Retrievers and Predictors for Protein Function Annotation. CoRR abs/2402.07955 (2024) - [i17]Jiarui Lu, Zuobai Zhang, Bozitao Zhong, Chence Shi, Jian Tang:
Fusing Neural and Physical: Augment Protein Conformation Sampling with Tractable Simulations. CoRR abs/2402.10433 (2024) - [i16]Arian R. Jamasb, Alex Morehead, Chaitanya K. Joshi, Zuobai Zhang, Kieran Didi, Simon V. Mathis, Charles Harris, Jian Tang, Jianlin Cheng, Pietro Lio, Tom L. Blundell:
Evaluating representation learning on the protein structure universe. CoRR abs/2406.13864 (2024) - [i15]Xinyu Yuan, Zhihao Zhan, Zuobai Zhang, Manqi Zhou, Jianan Zhao, Boyu Han, Yue Li, Jian Tang:
Cell-ontology guided transcriptome foundation model. CoRR abs/2408.12373 (2024) - 2023
- [c13]Zuobai Zhang, Minghao Xu, Arian Rokkum Jamasb, Vijil Chenthamarakshan, Aurélie C. Lozano, Payel Das, Jian Tang:
Protein Representation Learning by Geometric Structure Pretraining. ICLR 2023 - [c12]Songtao Liu, Zhengkai Tu, Minkai Xu, Zuobai Zhang, Lu Lin, Rex Ying, Jian Tang, Peilin Zhao, Dinghao Wu:
FusionRetro: Molecule Representation Fusion via In-Context Learning for Retrosynthetic Planning. ICML 2023: 22028-22041 - [c11]Zuobai Zhang, Minghao Xu, Aurélie C. Lozano, Vijil Chenthamarakshan, Payel Das, Jian Tang:
Pre-Training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction. NeurIPS 2023 - [c10]Yangtian Zhang, Zuobai Zhang, Bozitao Zhong, Sanchit Misra, Jian Tang:
DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing. NeurIPS 2023 - [i14]Zuobai Zhang, Minghao Xu, Aurélie C. Lozano, Vijil Chenthamarakshan, Payel Das, Jian Tang:
Physics-Inspired Protein Encoder Pre-Training via Siamese Sequence-Structure Diffusion Trajectory Prediction. CoRR abs/2301.12068 (2023) - [i13]Zuobai Zhang, Minghao Xu, Vijil Chenthamarakshan, Aurélie C. Lozano, Payel Das, Jian Tang:
Enhancing Protein Language Models with Structure-based Encoder and Pre-training. CoRR abs/2303.06275 (2023) - [i12]Yangtian Zhang, Zuobai Zhang, Bozitao Zhong, Sanchit Misra, Jian Tang:
DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing. CoRR abs/2306.01794 (2023) - [i11]Chuanrui Wang, Bozitao Zhong, Zuobai Zhang, Narendra Chaudhary, Sanchit Misra, Jian Tang:
PDB-Struct: A Comprehensive Benchmark for Structure-based Protein Design. CoRR abs/2312.00080 (2023) - 2022
- [j3]Zuobai Zhang, Wanyue Xu, Yuhao Yi
, Zhongzhi Zhang
Fast Approximation of Coherence for Second-Order Noisy Consensus Networks. IEEE Trans. Cybern. 52(1): 677-686 (2022) - [j2]Wanyue Xu, Bin Wu, Zuobai Zhang, Zhongzhi Zhang
Coherence Scaling of Noisy Second-Order Scale-Free Consensus Networks. IEEE Trans. Cybern. 52(7): 5923-5934 (2022) - [j1]Yuhao Yi
Biharmonic Distance-Based Performance Metric for Second-Order Noisy Consensus Networks. IEEE Trans. Inf. Theory 68(2): 1220-1236 (2022) - [c9]Shengchao Liu, Meng Qu, Zuobai Zhang, Huiyu Cai, Jian Tang:
Structured Multi-task Learning for Molecular Property Prediction. AISTATS 2022: 8906-8920 - [c8]Wanyue Xu, Liwang Zhu, Jiale Guan, Zuobai Zhang, Zhongzhi Zhang:
Effects of Stubbornness on Opinion Dynamics. CIKM 2022: 2321-2330 - [c7]Zhaocheng Zhu, Mikhail Galkin, Zuobai Zhang, Jian Tang:
Neural-Symbolic Models for Logical Queries on Knowledge Graphs. ICML 2022: 27454-27478 - [c6]Minghao Xu, Zuobai Zhang, Jiarui Lu, Zhaocheng Zhu, Yangtian Zhang, Chang Ma, Runcheng Liu, Jian Tang:
PEER: A Comprehensive and Multi-Task Benchmark for Protein Sequence Understanding. NeurIPS 2022 - [i10]Zhaocheng Zhu, Chence Shi, Zuobai Zhang, Shengchao Liu, Minghao Xu, Xinyu Yuan, Yangtian Zhang, Junkun Chen, Huiyu Cai, Jiarui Lu, Chang Ma, Runcheng Liu, Louis-Pascal A. C. Xhonneux, Meng Qu, Jian Tang:
TorchDrug: A Powerful and Flexible Machine Learning Platform for Drug Discovery. CoRR abs/2202.08320 (2022) - [i9]Shengchao Liu, Meng Qu, Zuobai Zhang, Huiyu Cai, Jian Tang:
Structured Multi-task Learning for Molecular Property Prediction. CoRR abs/2203.04695 (2022) - [i8]Zuobai Zhang, Minghao Xu, Arian R. Jamasb, Vijil Chenthamarakshan, Aurélie C. Lozano, Payel Das, Jian Tang:
Protein Representation Learning by Geometric Structure Pretraining. CoRR abs/2203.06125 (2022) - [i7]Zhaocheng Zhu, Mikhail Galkin, Zuobai Zhang, Jian Tang:
Neural-Symbolic Models for Logical Queries on Knowledge Graphs. CoRR abs/2205.10128 (2022) - [i6]Minghao Xu, Zuobai Zhang, Jiarui Lu, Zhaocheng Zhu, Yangtian Zhang, Chang Ma, Runcheng Liu, Jian Tang:
PEER: A Comprehensive and Multi-Task Benchmark for Protein Sequence Understanding. CoRR abs/2206.02096 (2022) - [i5]Wanyue Xu, Liwang Zhu, Jiale Guan, Zuobai Zhang, Zhongzhi Zhang:
Effects of Stubbornness on Opinion Dynamics. CoRR abs/2208.04160 (2022) - [i4]Songtao Liu, Rex Ying, Zuobai Zhang, Peilin Zhao, Jian Tang, Lu Lin, Dinghao Wu:
Metro: Memory-Enhanced Transformer for Retrosynthetic Planning via Reaction Tree. CoRR abs/2209.15315 (2022) - 2021
- [c5]Zuobai Zhang, Zhongzhi Zhang, Guanrong Chen:
Minimizing Spectral Radius of Non-Backtracking Matrix by Edge Removal. CIKM 2021: 2657-2667 - [c4]Zhaocheng Zhu, Zuobai Zhang, Louis-Pascal A. C. Xhonneux, Jian Tang:
Neural Bellman-Ford Networks: A General Graph Neural Network Framework for Link Prediction. NeurIPS 2021: 29476-29490 - [i3]Wanyue Xu, Bin Wu, Zuobai Zhang, Zhongzhi Zhang, Haibin Kan, Guanrong Chen:
Coherence Scaling of Noisy Second-Order Scale-Free Consensus Networks. CoRR abs/2101.08403 (2021) - [i2]Zuobai Zhang, Wanyue Xu, Zhongzhi Zhang, Guanrong Chen:
Opinion Dynamics Incorporating Higher-Order Interactions. CoRR abs/2102.03569 (2021) - [i1]Zhaocheng Zhu, Zuobai Zhang, Louis-Pascal A. C. Xhonneux, Jian Tang:
Neural Bellman-Ford Networks: A General Graph Neural Network Framework for Link Prediction. CoRR abs/2106.06935 (2021) - 2020
- [c3]Zuobai Zhang, Wanyue Xu, Zhongzhi Zhang, Guanrong Chen:
Opinion Dynamics Incorporating Higher-Order Interactions. ICDM 2020: 1430-1435 - [c2]Zuobai Zhang, Wanyue Xu, Zhongzhi Zhang
Nearly Linear Time Algorithm for Mean Hitting Times of Random Walks on a Graph. WSDM 2020: 726-734 - [c1]Wanyue Xu, Yibin Sheng, Zuobai Zhang, Haibin Kan, Zhongzhi Zhang:
Power-Law Graphs Have Minimal Scaling of Kemeny Constant for Random Walks. WWW 2020: 46-56
Coauthor Index
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last updated on 2024-11-08 20:25 CET by the dblp team
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