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Jim Zhanwen Li
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2020 – today
- 2024
- [i1]Xi Wang, Xin Liu, Songming Zhu, Zhanwen Li, Lina Gao:
Self-Updating Vehicle Monitoring Framework Employing Distributed Acoustic Sensing towards Real-World Settings. CoRR abs/2409.10259 (2024) - 2020
- [j15]Zhanwen Li, Lukasz Jaroszewski, Mallika Iyer, Mayya Sedova, Adam Godzik:
FATCAT 2.0: towards a better understanding of the structural diversity of proteins. Nucleic Acids Res. 48(Webserver-Issue): W60-W64 (2020)
2010 – 2019
- 2019
- [j14]Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W. Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik:
Cancer3D 2.0: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Res. 47(Database-Issue): D895-D899 (2019) - 2017
- [j13]Jim Zhanwen Li, C. Murray Woodside, John W. Chinneck, Marin Litoiu:
Adaptive Cloud Deployment Using Persistence Strategies and Application Awareness. IEEE Trans. Cloud Comput. 5(2): 277-290 (2017) - 2016
- [j12]Thomas Hrabe, Zhanwen Li, Mayya Sedova, Piotr Rotkiewicz, Lukasz Jaroszewski, Adam Godzik:
PDBFlex: exploring flexibility in protein structures. Nucleic Acids Res. 44(Database-Issue): 423-428 (2016) - 2015
- [j11]Dong Xu, Lukasz Jaroszewski, Zhanwen Li, Adam Godzik:
AIDA: ab initio domain assembly for automated multi-domain protein structure prediction and domain-domain interaction prediction. Bioinform. 31(13): 2098-2105 (2015) - 2014
- [j10]Dong Xu, Lukasz Jaroszewski, Zhanwen Li, Adam Godzik:
FFAS-3D: improving fold recognition by including optimized structural features and template re-ranking. Bioinform. 30(5): 660-667 (2014) - [j9]Anna Sheydina, Ruth Y. Eberhardt, Daniel J. Rigden, Yuanyuan Chang, Zhanwen Li, Christian M. Zmasek, Herbert L. Axelrod, Adam Godzik:
Structural genomics analysis of uncharacterized protein families overrepresented in human gut bacteria identifies a novel glycoside hydrolase. BMC Bioinform. 15: 112 (2014) - [j8]Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai W. Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik:
bNAber: database of broadly neutralizing HIV antibodies. Nucleic Acids Res. 42(Database-Issue): 1133-1139 (2014) - [j7]Zhanwen Li, Padmaja Natarajan, Yuzhen Ye, Thomas Hrabe, Adam Godzik:
POSA: a user-driven, interactive multiple protein structure alignment server. Nucleic Acids Res. 42(Webserver-Issue): 240-245 (2014) - [j6]Dong Xu, Lukasz Jaroszewski, Zhanwen Li, Adam Godzik:
AIDA: ab initio domain assembly server. Nucleic Acids Res. 42(Webserver-Issue): 308-313 (2014) - 2013
- [c11]Jim Zhanwen Li, Qinghua Lu, Liming Zhu, Len Bass, Xiwei Xu, Sherif Sakr, Paul L. Bannerman, Anna Liu:
Improving Availability of Cloud-Based Applications through Deployment Choices. IEEE CLOUD 2013: 43-50 - [c10]Qinghua Lu, Xiwei Xu, Liming Zhu, Len Bass, Zhanwen Li, Sherif Sakr, Paul L. Bannerman, Anna Liu:
Incorporating Uncertainty into In-Cloud Application Deployment Decisions for Availability. IEEE CLOUD 2013: 454-461 - [c9]Xiwei Xu, Liming Zhu, Jim Zhanwen Li, Len Bass, Qinghua Lu, Min Fu:
Modeling and analysing operation processes for dependability. DSN 2013: 1-2 - [c8]Xiwei Xu, Qinghua Lu, Liming Zhu, Zhanwen Li, Sherif Sakr, Hiroshi Wada, Ingo Weber:
Availability analysis for deployment of in-cloud applications. ISARCS 2013: 11-16 - [c7]Jim Zhanwen Li, Siyuan He, Liming Zhu, Xiwei Xu, Min Fu, Len Bass, Anna Liu, An Binh Tran:
Challenges to Error Diagnosis in Hadoop Ecosystems. LISA 2013: 145-154 - [c6]Qinghua Lu, Liming Zhu, Len Bass, Xiwei Xu, Zhanwen Li, Hiroshi Wada:
Cloud API issues: an empirical study and impact. QoSA 2013: 23-32 - 2011
- [j5]Lukasz Jaroszewski, Zhanwen Li, Xiao-hui Cai, Christoph Weber, Adam Godzik:
FFAS server: novel features and applications. Nucleic Acids Res. 39(Web-Server-Issue): 38-44 (2011)
2000 – 2009
- 2009
- [c5]Jim Zhanwen Li, John W. Chinneck, C. Murray Woodside, Marin Litoiu:
Deployment of Services in a Cloud Subject to Memory and License Constraints. IEEE CLOUD 2009: 33-40 - [c4]Jim Zhanwen Li, John W. Chinneck, C. Murray Woodside, Marin Litoiu:
Fast scalable optimization to configure service systems having cost and quality of service constraints. ICAC 2009: 159-168 - 2007
- [j4]Iddo Friedberg, Tim Harder, Rachel Kolodny, Einat Sitbon, Zhanwen Li, Adam Godzik:
Using an alignment of fragment strings for comparing protein structures. Bioinform. 23(2): 219-224 (2007) - [c3]Zhanwen Li, David Levy, Shiping Chen, John Zic:
Explicitly Controlling the Fair Service for Busy Web Servers. ASWEC 2007: 159-168 - 2006
- [j3]Zhanwen Li, Yuzhen Ye, Adam Godzik:
Flexible Structural Neighborhood - a database of protein structural similarities and alignments. Nucleic Acids Res. 34(Database-Issue): 277-280 (2006) - [c2]Zhanwen Li, David Levy, Shiping Chen, John Zic:
Auto-tune design and evaluation on staged event-driven architecture. MODDM 2006: 1-6 - [c1]Yuzhen Ye, Zhanwen Li, Adam Godzik:
Modeling and Analyzing Three-Dimensional Structures of Human Disease Proteins. Pacific Symposium on Biocomputing 2006: 439-450 - 2005
- [j2]Lukasz Jaroszewski, Leszek Rychlewski, Zhanwen Li, Weizhong Li, Adam Godzik:
FFAS03: a server for profile-profile sequence alignments. Nucleic Acids Res. 33(Web-Server-Issue): 284-288 (2005) - 2003
- [j1]Gui-Ding Gu, Jian-Jun Zhang, Zhanwen Li:
Restarted GMRES Augmented with Eigenvectors for Shifted Linear Systems. Int. J. Comput. Math. 80(8): 1037-1047 (2003)
Coauthor Index
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