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Ashkan Golshani
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2020 – today
- 2023
- [j9]Nour Nissan, Julia Hooker, Eric Arezza, Kevin Dick, Ashkan Golshani, Benjamin Mimee, Elroy Cober, James R. Green, Bahram Samanfar:
Large-scale data mining pipeline for identifying novel soybean genes involved in resistance against the soybean cyst nematode. Frontiers Bioinform. 3 (2023)
2010 – 2019
- 2019
- [j8]Nashira Grigg, Andrew Schoenrock, Kevin Dick, James R. Green, Ashkan Golshani, Alex Wong, Frank Dehne, Eve C. Tsai, Kyle K. Biggar:
Insights into the suitability of utilizing brown rats (Rattus norvegicus) as a model for healing spinal cord injury with epidermal growth factor and fibroblast growth factor-II by predicting protein-protein interactions. Comput. Biol. Medicine 104: 220-226 (2019) - 2017
- [j7]Tom Kazmirchuk, Kevin Dick, Daniel J. Burnside, Brad Barnes, Houman Moteshareie, Maryam Hajikarimlou, Katayoun Omidi, Duale Ahmed, Andrew Low, Clara Lettl, Mohsen Hooshyar, Andrew Schoenrock, Sylvain Pitre, Mohan Babu, Edana Cassol, Bahram Samanfar, Alex Wong, Frank Dehne, James R. Green, Ashkan Golshani:
Designing anti-Zika virus peptides derived from predicted human-Zika virus protein-protein interactions. Comput. Biol. Chem. 71: 180-187 (2017) - [j6]Adele Mehranfar, Nasser Ghadiri, Morteza Kouhsar, Ashkan Golshani:
A Type-2 fuzzy data fusion approach for building reliable weighted protein interaction networks with application in protein complex detection. Comput. Biol. Medicine 88: 18-31 (2017) - [c5]Kevin Dick, Frank Dehne, Ashkan Golshani, James R. Green:
Positome: A method for improving protein-protein interaction quality and prediction accuracy. CIBCB 2017: 1-8 - 2015
- [j5]James Vlasblom, Khalid Zuberi, Harold Rodriguez, Roland Arnold, Alla Gagarinova, Viktor Deineko, Ashwani Kumar, Elisa Leung, Kamran Rizzolo, Bahram Samanfar, Luke Chang, Sadhna Phanse, Ashkan Golshani, Jack Greenblatt, Walid A. Houry, Andrew Emili, Quaid Morris, Gary D. Bader, Mohan Babu:
Novel function discovery with GeneMANIA: a new integrated resource for gene function prediction in Escherichia coli. Bioinform. 31(3): 306-310 (2015) - [c4]Andrew Schoenrock, Daniel J. Burnside, Houman Moteshareie, Alex Wong, Ashkan Golshani, Frank Dehne:
Engineering inhibitory proteins with InSiPS: the in-silico protein synthesizer. SC 2015: 25:1-25:11 - 2014
- [j4]Andrew Schoenrock, Bahram Samanfar, Sylvain Pitre, Mohsen Hooshyar, Ke Jin, Charles A. Phillips, Hui Wang, Sadhna Phanse, Katayoun Omidi, Yuan Gui, Md Alamgir, Alex Wong, Fredrik Barrenäs, Mohan Babu, Mikael Benson, Michael A. Langston, James R. Green, Frank K. H. A. Dehne, Ashkan Golshani:
Efficient prediction of human protein-protein interactions at a global scale. BMC Bioinform. 15: 383 (2014) - 2011
- [j3]Adam Amos-Binks, Catalin Patulea, Sylvain Pitre, Andrew Schoenrock, Yuan Gui, James R. Green, Ashkan Golshani, Frank K. H. A. Dehne:
Binding Site Prediction for Protein-Protein Interactions and Novel Motif Discovery using Re-occurring Polypeptide Sequences. BMC Bioinform. 12: 225 (2011) - [c3]Andrew Schoenrock, Frank K. H. A. Dehne, James R. Green, Ashkan Golshani, Sylvain Pitre:
MP-PIPE: a massively parallel protein-protein interaction prediction engine. ICS 2011: 327-337
2000 – 2009
- 2007
- [j2]Negar Memarian, Matthew Jessulat, Javad Alirezaie, Nadereh Mir-Rashed, Jianhua Xu, Mehri Zareie, Myron Smith, Ashkan Golshani:
Colony size measurement of the yeast gene deletion strains for functional genomics. BMC Bioinform. 8 (2007) - 2006
- [j1]Sylvain Pitre, Frank K. H. A. Dehne, Albert Chan, James Cheetham, Alex Duong, Andrew Emili, Marinella Gebbia, Jack Greenblatt, Matthew Jessulat, Nevan J. Krogan, Xuemei Luo, Ashkan Golshani:
PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs. BMC Bioinform. 7: 365 (2006) - [c2]Zahra Nafar, Ashkan Golshani:
Data Mining Methods for Protein-Protein Interactions. CCECE 2006: 991-994 - [c1]Negar Memarian, Javad Alirezaie, Ashkan Golshani:
Automated System for Image Analysis of Yeast Colonies: A Novel Application in Functional Genomics. ICASSP (2) 2006: 1120-1123
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