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Darren J. Wilkinson
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2020 – today
- 2023
- [j38]Naomi E. Hannaford, Sarah E. Heaps
, Tom M. W. Nye, Thomas P. Curtis
A sparse Bayesian hierarchical vector autoregressive model for microbial dynamics in a wastewater treatment plant. Comput. Stat. Data Anal. 179: 107659 (2023) - [j37]Lorna J. Richardson
MGnify: the microbiome sequence data analysis resource in 2023. Nucleic Acids Res. 51(D1): 753-759 (2023) - 2020
- [j36]Lucian P. Smith
Systems Biology Markup Language (SBML) Level 3 Package: Distributions, Version 1, Release 1. J. Integr. Bioinform. 17(2-3) (2020)
2010 – 2019
- 2019
- [j35]Clement Lee
A review of stochastic block models and extensions for graph clustering. Appl. Netw. Sci. 4(1): 122 (2019) - [j34]Michael Hucka
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2. J. Integr. Bioinform. 16(2) (2019) - [j33]Oluwole K. Oyebamiji
Bayesian emulation and calibration of an individual-based model of microbial communities. J. Comput. Sci. 30: 194-208 (2019) - [i4]Clement Lee
A Review of Stochastic Block Models and Extensions for Graph Clustering. CoRR abs/1903.00114 (2019) - 2018
- [j32]Michael Hucka
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core. J. Integr. Bioinform. 15(1) (2018) - [j31]Michael Hucka
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core. J. Integr. Bioinform. 15(1) (2018) - [j30]Alex L. Mitchell
EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies. Nucleic Acids Res. 46(Database-Issue): D726-D735 (2018) - [j29]Clement Lee
A network epidemic model for online community commissioning data. Stat. Comput. 28(4): 891-904 (2018) - [j28]Jonathan Law, Darren J. Wilkinson
Composable models for online Bayesian analysis of streaming data. Stat. Comput. 28(6): 1119-1137 (2018) - [c2]Lauren Roberts, Peter Michalák, Sarah E. Heaps
Automating the Placement of Time Series Models for IoT Healthcare Applications. eScience 2018: 290-291 - [i3]Clement Lee, Darren J. Wilkinson:
A hierarchical model of non-homogeneous Poisson processes for Twitter retweets. CoRR abs/1802.01987 (2018) - [i2]Clement Lee
A Social Network Analysis of Articles on Social Network Analysis. CoRR abs/1810.09781 (2018) - 2017
- [j27]Oluwole K. Oyebamiji
Gaussian process emulation of an individual-based model simulation of microbial communities. J. Comput. Sci. 22: 69-84 (2017) - [i1]Clement Lee, Andrew Garbett, Darren J. Wilkinson:
A Network Epidemic Model for Online Community Commissioning Data. CoRR abs/1702.07662 (2017) - 2015
- [j26]Michael Hucka
Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions. J. Integr. Bioinform. 12(2) (2015) - [j25]Michael Hucka
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core. J. Integr. Bioinform. 12(2) (2015) - [j24]Jamie Owen, Darren J. Wilkinson
Scalable inference for Markov processes with intractable likelihoods. Stat. Comput. 25(1): 145-156 (2015) - 2014
- [j23]Jonathan Heydari, Conor Lawless, David A. Lydall
Fast Bayesian parameter estimation for stochastic logistic growth models. Biosyst. 122: 55-72 (2014) - 2013
- [j22]Peter Milner, Colin S. Gillespie
Moment closure based parameter inference of stochastic kinetic models. Stat. Comput. 23(2): 287-295 (2013) - 2012
- [j21]Jochen Weile
Bayesian integration of networks without gold standards. Bioinform. 28(11): 1495-1500 (2012) - [j20]Mark Mc Auley, Darren J. Wilkinson
A whole-body mathematical model of cholesterol metabolism and its age-associated dysregulation. BMC Syst. Biol. 6: 130 (2012) - 2011
- [j19]Jochen Weile
Customizable views on semantically integrated networks for systems biology. Bioinform. 27(9): 1299-1306 (2011) - 2010
- [j18]Yuhui Chen, Conor Lawless
CaliBayes and BASIS: integrated tools for the calibration, simulation and storage of biological simulation models. Briefings Bioinform. 11(3): 278-289 (2010) - [j17]Conor Lawless
Colonyzer: automated quantification of micro-organism growth characteristics on solid agar. BMC Bioinform. 11: 287 (2010) - [j16]Howsun Jow, Madhuchhanda Bhattacharjee
The Integration of Genetic Maps Using Bayesian Inference. J. Comput. Biol. 17(6): 825-840 (2010) - [j15]Simon J. Cockell
An integrated dataset for in silico drug discovery. J. Integr. Bioinform. 7(3) (2010) - [p1]Darren J. Wilkinson, Andrew Golightly:
Markov Chain Monte Carlo Algorithms for SDE Parameter Estimation. Learning and Inference in Computational Systems Biology 2010: 253-276
2000 – 2009
- 2008
- [j14]Thomas W. Evans, Colin S. Gillespie
The SBML discrete stochastic models test suite. Bioinform. 24(2): 285-286 (2008) - [j13]Andrew Golightly
Bayesian inference for nonlinear multivariate diffusion models observed with error. Comput. Stat. Data Anal. 52(3): 1674-1693 (2008) - [j12]Richard J. Boys, Darren J. Wilkinson
Bayesian inference for a discretely observed stochastic kinetic model. Stat. Comput. 18(2): 125-135 (2008) - 2007
- [j11]Darren J. Wilkinson
Bayesian methods in bioinformatics and computational systems biology. Briefings Bioinform. 8(2): 109-116 (2007) - 2006
- [j10]Colin S. Gillespie
Tools for the SBML Community. Bioinform. 22(5): 628-629 (2006) - [j9]Andrew Golightly
Bayesian Sequential Inference for Stochastic Kinetic Biochemical Network Models. J. Comput. Biol. 13(3): 838-851 (2006) - [j8]Colin S. Gillespie
BASIS: an internet resource for network modelling. J. Integr. Bioinform. 3(2) (2006) - [j7]Andrew Golightly
Bayesian sequential inference for nonlinear multivariate diffusions. Stat. Comput. 16(4): 323-338 (2006) - 2005
- [j6]Mark Mc Auley, Janette Jones, Darren J. Wilkinson, Thomas B. L. Kirkwood:
Modelling Lipid Metabolism to Improve Healthy Ageing. BMC Bioinform. 6(S-3) (2005) - [j5]Richard J. Boys, Daniel Henderson, Thomas B. L. Kirkwood, Darren J. Wilkinson, W. Eryk Wolski:
CaliBayes: Integration of GRID based simulation and data resources for Bayesian calibration of biological models. BMC Bioinform. 6(S-3) (2005) - 2004
- [j4]Darren J. Wilkinson
A sparse matrix approach to Bayesian computation in large linear models. Comput. Stat. Data Anal. 44(3): 493-516 (2004) - 2002
- [j3]Darren J. Wilkinson
Conditional simulation from highly structured Gaussian systems, with application to blocking-MCMC for the Bayesian analysis of very large linear models. Stat. Comput. 12(3): 287-300 (2002) - 2001
- [j2]Michael M. Goldstein, Darren J. Wilkinson
Restricted Prior Inference for Complex Uncertainty Structures. Ann. Math. Artif. Intell. 32(1-4): 315-334 (2001) - 2000
- [j1]Michael M. Goldstein, Darren J. Wilkinson
Bayes linear analysis for graphical models: The geometric approach to local computation and interpretive graphics. Stat. Comput. 10(4): 311-324 (2000)
1990 – 1999
- 1998
- [c1]Darren J. Wilkinson:
An Object-Oriented Approach to Local Computation in Bayes Linear Belief Networks. COMPSTAT 1998: 491-496
Coauthor Index
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