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Stephen D. Larson
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2010 – 2019
- 2016
- [j7]Andrey Palyanov
, Sergey Khayrulin
Application of smoothed particle hydrodynamics to modeling mechanisms of biological tissue. Adv. Eng. Softw. 98: 1-11 (2016) - [i2]Gopal P. Sarma
Unit testing, model validation, and biological simulation. F1000Research 5: 1946 (2016) - 2015
- [i1]Gopal P. Sarma, Travis W. Jacobs, Mark D. Watts, Vahid Ghayoomi, Richard C. Gerkin, Stephen D. Larson:
Unit Testing, Model Validation, and Biological Simulation. CoRR abs/1508.04635 (2015) - 2014
- [j6]Balazs Szigeti
OpenWorm: an open-science approach to modeling Caenorhabditis elegans. Frontiers Comput. Neurosci. 8: 137 (2014) - 2013
- [j5]Stephen D. Larson, Maryann E. Martone
NeuroLex.org: an online framework for neuroscience knowledge. Frontiers Neuroinformatics 7: 18 (2013) - 2012
- [j4]Andrey Palyanov
Towards a virtual C. elegans: A framework for simulation and visualization of the neuromuscular system in a 3D physical environment. Silico Biol. 11(3-4): 137-147 (2012) - [c7]Fahim T. Imam
Maturation of Neuroscience Information Framework: An Ontology Driven Information System for Neuroscience. FOIS 2012: 15-28 - 2011
- [j3]Michael Hawrylycz, Richard A. Baldock
Digital Atlasing and Standardization in the Mouse Brain. PLoS Comput. Biol. 7(2) (2011) - [c6]Fahim T. Imam, Stephen D. Larson, Jeffrey S. Grethe, Amarnath Gupta, Anita E. Bandrowski, Maryann E. Martone:
NIFSTD and NeuroLex: Comprehensive Neuroscience Ontology Development Based on Multiple Biomedical Ontologies and Community Involvement. ICBO 2011 - [c5]Chris Mungall, David Anderson, Anita E. Bandrowski, Brian A. Canada, Andrew Chatr-aryamontri, Keith C. Cheng, P. Michael Conn, Kara Dolinski, Mark H. Ellisman, Janan T. Eppig, Jeffrey S. Grethe, Joseph W. Kemnitz, Shawn Iadonato, Stephen D. Larson, Charles Magness, Maryann E. Martone, Mike Tyers, Carlo Torniai, Olga G. Troyanskaya, Judith Turner, Monte Westerfield, Melissa A. Haendel:
An Ontology-Based Approach to Linking Model Organisms and Resources to Human Diseases. ICBO 2011
2000 – 2009
- 2009
- [c4]Stephen D. Larson, Sarah Maynard, Fahim T. Imam, Maryann E. Martone:
NeuroLex.org - A semantic wiki for neuroinformatics based on the NIF Standard Ontology. SWAT4LS 2009 - 2008
- [j2]William J. Bug, Giorgio A. Ascoli, Jeffrey S. Grethe
The NIFSTD and BIRNLex Vocabularies: Building Comprehensive Ontologies for Neuroscience. Neuroinformatics 6(3): 175-194 (2008) - [p1]Maryann E. Martone, Ilya Zaslavsky, Amarnath Gupta, Asif Memon, Joshua Tran, Willy Wong, Lisa Fong, Stephen D. Larson, Mark H. Ellisman:
The Smart Atlas: Spatial and Semantic Strategies for Multiscale Integration of Brain Data. Anatomy Ontologies for Bioinformatics 2008: 267-286 - 2007
- [j1]Stephen D. Larson, Lisa Fong, Amarnath Gupta, Christopher Condit, William J. Bug, Maryann E. Martone
A formal ontology of subcellular neuroanatomy. Frontiers Neuroinformatics 1: 3 (2007) - [c3]Amarnath Gupta, Stephen D. Larson, Christopher Condit, Sandeep Gupta, Lisa Fong, Li Chen, Maryann E. Martone:
Toward an Ontological Database for Subcellular Neuroanatomy. ER Workshops 2007: 64-73 - [c2]Lisa Fong, Stephen D. Larson, Amarnath Gupta, Christopher Condit, William J. Bug, Li Chen, Ruth West, Stephan Lamont, Masako Terada, Maryann E. Martone:
An Ontology-Driven Knowledge Environment For Subcellular Neuroanatomy. OWLED 2007 - [c1]Stephen D. Larson, Maryann E. Martone:
Rule-Based Reasoning With A Multi-Scale Neuroanatomical Ontology. OWLED 2007
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