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Volume 9, January 2019

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Raghu Dharmavarapu, Shanti Bhattacharya, Saulius Juodkazis:
GDOESII: Software for design of diffractive optical elements and phase mask conversion to GDSII lithography files. 126-131
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Francisco J. Gómez, Luigi Vanfretti, Miguel Aguilera Chaves, Svein Harald Olsen:
CIM-2-mod: A CIM to modelica mapping and model-2-model transformation engine. 161-167
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  - journals/softx/Mansour19
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Andrew Abi Mansour:
PyGran: An object-oriented library for DEM simulation and analysis. 168-174
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  - journals/softx/Rudolph-Lilith19
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Michelle Rudolph-Lilith:
ChessY: A Mathematica toolbox for the generation, visualization and analysis of positional chess graphs. 39-43
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  - journals/softx/ThakurDG19
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Abhishek Thakur, Arnav Dhamija, Tejeshwar Reddy G:
VECTORS - VidEo Communication Through Opportunistic Relays and Scalable video coding. 55-60
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  - journals/softx/Kwary19
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Deny A. Kwary:
A corpus platform of Indonesian academic language. 102-106
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  - journals/softx/RodriguezAS19
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Miguel A. Rodriguez, Christoph M. Augustin, Shawn C. Shadden:
FEniCS mechanics: A package for continuum mechanics simulations. 107-111
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  - journals/softx/DhakalM19
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Suresh Dhakal, Mohamed A. Moustafa:
MC-BAM: Moment-curvature analysis for beams with advanced materials. 175-182
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  - journals/softx/PetschkeS19a
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Danny Petschke, Torsten E. M. Staab:
Update (v1.3) to DLTPulseGenerator: A library for the simulation of lifetime spectra based on detector-output pulses. 183-186
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  - journals/softx/CreatiVS19
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Nicola Creati, Roberto Vidmar, Paolo Sterzai:
Field Animation. 211-216
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  - journals/softx/CampbellGS19
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Anna Charvátová Campbell, Petr Grolich, Radek Slesinger:
Niget: Nanoindentation general evaluation tool. 248-254
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  - journals/softx/Zienert19
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Tilo Zienert:
cp-tools: A Python library for predicting heat capacity of crystalline substances. 244-247
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Melina C. Vidoni, Aldo R. Vecchietti:
"rsppfp": An R package for the shortest path problem with forbidden paths. 265-270
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Vitalis Salis, Diomidis Spinellis:
RepoFS: File system view of Git repositories. 288-292
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Matthew Roughan:
Practically surreal: Surreal arithmetic in Julia. 293-298
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Gabriel Johnson, Sandra Spiroff:
Automating the calculation of the Hilbert-Kunz multiplicity and F-signature. 35-38
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Mihály Héder, Szabolcs Tenczer, Andrea Biancini:
Collaboration between SAML federations and OpenStack clouds. 44-48
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Kaden E. Plewe, Amanda D. Smith:
PECT: A tool for computing the temporal and spatial variation of externalities related to power generation in the United States. 61-67
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  - journals/softx/Sheu19
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Guang-Yih Sheu:
aXBRL: Search of fraudulent XBRL instance documents with an Android app. 308-316
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  - journals/softx/Karathanasopoulos19
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Nikolaos Karathanasopoulos, Panagiotis E. Hadjidoukas:
TendonMech: An open source high performance code to compute the mechanical behavior of tendon fascicles. 324-327
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Editorial Board. i
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Svenja Schoeder, Wolfgang A. Wall, Martin Kronbichler:
ExWave: A high performance discontinuous Galerkin solver for the acoustic wave equation. 49-54
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  - journals/softx/HortonKMNNQVH19
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Brandon K. Horton, Rajiv K. Kalia, Erick Moen, Aiichiro Nakano, Ken-ichi Nomura, Michael Qian, Priya Vashishta, Anders Hafreager:
Game-Engine-Assisted Research platform for Scientific computing (GEARS) in Virtual Reality. 112-116
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  - journals/softx/KazantsevPTW19
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Daniil Kazantsev, Edoardo Pasca, Martin J. Turner, Philip J. Withers:
CCPi-Regularisation toolkit for computed tomographic image reconstruction with proximal splitting algorithms. 317-323
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  - journals/softx/BingolK19
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Onur Rauf Bingol, Adarsh Krishnamurthy:
NURBS-Python: An open-source object-oriented NURBS modeling framework in Python. 85-94
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  - journals/softx/PhamRSS19
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Hung Tien Pham, Wolfram Rühaak, Valerian Schuster, Ingo Sass:
Fully hydro-mechanical coupled Plug-in (SUB+) in FEFLOW for analysis of land subsidence due to groundwater extraction. 15-19
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  - journals/softx/KonkovP19
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Vladimir Konkov, Roberto Peverati:
QMC-SW: A simple workflow for quantum Monte Carlo calculations in chemistry. 7-14
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  - journals/softx/Ceraolo19
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Massimo Ceraolo:
MC's PlotXY - A general-purpose plotting and post-processing open-source tool. 282-287
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  - journals/softx/Giulioni19
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Gianfranco Giulioni:
GABRIELE: The General Agent Based Repast Implemented Extensible Laboratory for Economics. 255-259
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  - journals/softx/GarnierMGG19
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Guillaume F. G. Garnier, Clare A. Manderson, Saveen Giri, Gil Garnier:
IdentiCyte: Simple red blood cell identification software. 223-229
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  - journals/softx/KrishnamaniSP19
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Venkatramanan Krishnamani, Mark A. Stamnes, Robert C. Piper:
MALTA: A calculator for estimating the coverage with shRNA, CRISPR, and cDNA libraries. 154-160
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  - journals/softx/AlHamaydehANA19
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Mohammad AlHamaydeh, Nader Aly, Mohamad Najib, Sameer Alawnah:
INSPECT-PBEE: A performance-based earthquake engineering GUI for IDARC-2D. 132-144
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  - journals/softx/ShahdiP19
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Arya Shahdi, Ekarit Panacharoensawad:
SP-Wax: Solid-liquid equilibrium thermodynamic modeling software for paraffinic systems. 145-153
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  - journals/softx/ZupkoR19
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Robert Zupko, Mark Rouleau:
ForestSim: Spatially explicit agent-based modeling of non-industrial forest owner policies. 117-125
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  - journals/softx/HaselsteinerLPW19
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Andreas F. Haselsteiner, Jannik Lehmkuhl, Tobias Pape, Kai-Lukas Windmeier, Klaus-Dieter Thoben:
ViroCon: A software to compute multivariate extremes using the environmental contour method. 95-101
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  - journals/softx/LacroixMBPJPPR19
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Pierre Lacroix, Frédéric Moser, Antonio Benvenuti, Thomas Piller, David Jensen, Inga Petersen, Marion Planque, Nicolas Ray:
MapX: An open geospatial platform to manage, analyze and visualize data on natural resources and the environment. 77-84
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  - journals/softx/MathurPAK19
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Parul Mathur, Mauricio David Perez, Robin Augustine, Dhanesh G. Kurup:
NDECOAX: A software package for nondestructive evaluation of stratified dielectric media. 187-192
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  - journals/softx/CardinotOGP19
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Marcos Cardinot, Colm O'Riordan, Josephine Griffith, Matjaz Perc:
Evoplex: A platform for agent-based modeling on networks. 199-204
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  - journals/softx/MicieliMG19
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Davide Micieli, Triestino Minniti, Giuseppe Gorini:
NeuTomPy toolbox, a Python package for tomographic data processing and reconstruction. 260-264
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  - journals/softx/TianLDM19
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Liang Tian, Lin Li, Jun Ding, Normand Mousseau:
ART_data_analyzer: Automating parallelized computations to study the evolution of materials. 238-243
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  - journals/softx/MentaschiVBF19
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Lorenzo Mentaschi, Michalis I. Vousdoukas, Giovanni Besio, Luc Feyen:
alphaBetaLab: Automatic estimation of subscale transparencies for the Unresolved Obstacles Source Term in ocean wave modelling. 1-6
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  - journals/softx/DiblenABCHS19
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Faruk Diblen, Jisk Attema, Rena Bakhshi, Sascha Caron, Luc Hendriks, Bob Stienen:
spot: Open Source framework for scientific data repository and interactive visualization. 328-331
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  - journals/softx/GaliziaZRDCD19
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Antonella Galizia, Gabriele Zereik, Luca Roverelli, Emanuele Danovaro, Andrea Clematis, Daniele D'Agostino:
Json-GUI - A module for the dynamic generation of form-based web interfaces. 28-34
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  - journals/softx/Bjornson19
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Kristofer Björnson:
TBTK: A quantum mechanics software development kit. 205-210
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  - journals/softx/VencelsRG19
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Juris Vencels, Peter Råback, Vadims Geza:
EOF-Library: Open-source Elmer FEM and OpenFOAM coupler for electromagnetics and fluid dynamics. 68-72
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  - journals/softx/PallonettoMMF19
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Fabiano Pallonetto, Eleni E. Mangina, Federico Milano, Donal Patrick Finn:
SimApi, a smartgrid co-simulation software platform for benchmarking building control algorithms. 271-281
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  - journals/softx/YadavKKD19
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Vinay Yadav, Subhankar Karmakar, Pradip P. Kalbar, Anil Kumar Dikshit:
PyTOPS: A Python based tool for TOPSIS. 217-222
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  - journals/softx/Alvarez-Gomez19
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José A. Álvarez-Gómez:
FMC - Earthquake focal mechanisms data management, cluster and classification. 299-307
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  - journals/softx/TsaiGSRS19
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Hsieh-Fu Tsai, Joanna Gajda, Tyler F. W. Sloan, Andrei Rares, Amy Q. Shen:
Usiigaci: Instance-aware cell tracking in stain-free phase contrast microscopy enabled by machine learning. 230-237
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  - journals/softx/SteppaH19
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Constantin Steppa, Tim Lukas Holch:
HexagDLy - Processing hexagonally sampled data with CNNs in PyTorch. 193-198
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  - journals/softx/NejahiBMJRLSP19
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Younes Nejahi, Mohammad Soroush Barhaghi, Jason R. Mick, Brock Jackman, Kamel Rushaidat, Yuanzhe Li, Loren Schwiebert, Jeffrey J. Potoff:
GOMC: GPU Optimized Monte Carlo for the simulation of phase equilibria and physical properties of complex fluids. 20-27
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  - journals/softx/SmylBL19
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Danny Smyl, Sven Bossuyt, Dong Liu:
OpenQSEI: A MATLAB package for quasi static elasticity imaging. 73-76

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