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Volume 14, Number 1, March 2015

Part 1: Special Issue: Complex Systems Modelling and Simulation

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  - journals/nc/StepneyA15
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Susan Stepney, Paul S. Andrews:
CoSMoS special issue editorial. 1-6
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Li Tao, Jiming Liu:
Understanding self-organized regularities in healthcare services based on autonomy oriented modeling. 7-24
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Philip Garnett:
A tipping point in 300 years of banking? A conceptual simulation of the British banking system. 25-37
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Andrew Hone, Kim Towler:
Non-standard discretization of biological models. 39-48
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Fiona Polack:
Filling gaps in simulation of complex systems: the background and motivation for CoSMoS. 49-62
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Fiona Polack, Alastair P. Droop:
Principled simulation of cell proliferation dynamics using the CoSMoS approach. 63-82
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Tim Hoverd, Susan Stepney:
Environment orientation: a structured simulation approach for agent-based complex systems. 83-97
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  - journals/nc/AldenAVTC15
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Kieran Alden, Paul S. Andrews, Henrique Veiga-Fernandes, Jon Timmis, Mark C. Coles:
Utilising a simulation platform to understand the effect of domain model assumptions. 99-107
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Ye Li, Adam T. Sampson, James Bown, Hilal S. Khalil, Yusuf Deeni:
Understanding tissue morphology: model repurposing using the CoSMoS process. 109-128
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Jose Evora, Jose Juan Hernandez, Mario Hernández:
Advantages of Model Driven Engineering for studying complex systems. 129-144
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Katie Barr, T. Fleming, Viv M. Kendon:
Simulation methods for quantum walks on graphs applied to formal language recognition. 145-156
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Mauricio Guevara-Souza, Edgar E. Vallejo:
Using a simulated Wolbachia infection mechanism to improve multi-objective evolutionary algorithms. 157-167
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Xiaohui Yan, Yunlong Zhu, Hanning Chen, Hao Zhang:
A novel hybrid artificial bee colony algorithm with crossover operator for numerical optimization. 169-184
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Enrico Formenti, Luca Manzoni, Antonio E. Porreca:
On the complexity of occurrence and convergence problems in reaction systems. 185-191

Volume 14, Number 2, June 2015

Part1: SI "DNA Computing and Molecular Programming 2013"

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David Soloveichik, Bernard Yurke:
Preface. 193-194
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Frits Dannenberg, Marta Z. Kwiatkowska, Chris Thachuk, Andrew J. Turberfield:
DNA walker circuits: computational potential, design, and verification. 195-211
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David Doty, Monir Hajiaghayi:
Leaderless deterministic chemical reaction networks. 213-223
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Moya Chen, Doris Xin, Damien Woods:
Parallel computation using active self-assembly. 225-250
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Tyler Fochtman, Jacob Hendricks, Jennifer E. Padilla, Matthew J. Patitz, Trent A. Rogers:
Signal transmission across tile assemblies: 3D static tiles simulate active self-assembly by 2D signal-passing tiles. 251-264
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Alexandra Keenan, Robert T. Schweller, Xingsi Zhong:
Exponential replication of patterns in the signal tile assembly model. 265-278
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Lila Kari, Steffen Kopecki, Shinnosuke Seki:
3-color bounded patterned self-assembly. 279-292
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Andrew Winslow:
Staged self-assembly and polyomino context-free grammars. 293-302
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Vipul K. Dabhi, Sanjay Chaudhary:
Empirical modeling using genetic programming: a survey of issues and approaches. 303-330
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Adil Amirjanov:
The parameters setting of a changing range genetic algorithm. 331-338

Volume 14, Number 3, September 2015

Part 1: Special Issue: Algorithms and models for complex natural systems

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Carlos A. Coello Coello, Giuditta Franco, Natalio Krasnogor, Mario Pavone:
Algorithms and models for complex natural systems. 339-340
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Roberto Pagliarini, Mara Sangiovanni, Adriano Peron, Diego di Bernardo:
Combining flux balance analysis and model checking for metabolic network validation and analysis. 341-354
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Ewa Gajda-Zagórska, Robert Schaefer, Maciej Smolka, Maciej Paszynski, David Pardo:
A hybrid method for inversion of 3D DC resistivity logging measurements. 355-374
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Alberto Castellini, Vincenzo Manca, Mauro Zucchelli:
An evolutionary procedure for inferring MP systems regulation functions of biological networks. 375-391
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Raffaele Giancarlo, Giosuè Lo Bosco, Filippo Utro:
Bayesian versus data driven model selection for microarray data. 393-402
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Alberto Castellini, Giuditta Franco, Alessio Milanese:
A genome analysis based on repeat sharing gene networks. 403-420
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Emanuela Merelli, Marco Pettini, Mario Rasetti:
Topology driven modeling: the IS metaphor. 421-430

Part 2: Special Issue: Optical Parallel Supercomputing

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Shlomi Dolev, Mihai Oltean:
Optical SuperComputing: Preface to special issue. 431-432
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Shlomi Dolev, Nova Fandina, Joseph Rosen:
Holographic parallel processor for calculating Kronecker product. 433-436
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Sama Goliaei, Saeed Jalili:
Computation with optical sensitive sheets. 437-450
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Joseph Shamir:
To what extent is zero energy computing feasible? 451-456
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Jonathan I. Tamir, Dan E. Tamir, Wilhelmus J. Geerts, Shlomi Dolev:
Compressive scanning of an object signature. 457-467
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Nicole Drechsler, André Sülflow, Rolf Drechsler:
Incorporating user preferences in many-objective optimization using relation ε-preferred. 469-483
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Daniel Burgarth, Vittorio Giovannetti, Leslie Hogben, Simone Severini, Michael Young:
Logic circuits from zero forcing. 485-490
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Joanna A. Ellis-Monaghan, Andrew McDowell, Iain Moffatt, Greta Pangborn:
DNA origami and the complexity of Eulerian circuits with turning costs. 491-503

Volume 14, Number 4, December 2015

Part 1: Special Issue: Asynchronous behavior of cellular automata and discrete models

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Alberto Dennunzio, Enrico Formenti, Giancarlo Mauri, Thomas Worsch:
Foreword: asynchronous behavior of cellular automata and discrete models. 505-506
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Henryk Fuks, Nazim Fatès:
Local structure approximation as a predictor of second-order phase transitions in asynchronous cellular automata. 507-522
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Pierre-Yves Louis:
Supercritical probabilistic cellular automata: how effective is the synchronous updating? 523-534
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Hannes Klarner, Alexander Bockmayr, Heike Siebert:
Computing maximal and minimal trap spaces of Boolean networks. 535-544
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Paul Ruet:
Asynchronous Boolean networks and hereditarily bijective maps. 545-553
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Adam Streck, Therese Lorenz, Heike Siebert:
Minimization and equivalence in multi-valued logical models of regulatory networks. 555-566

Part 2: Special Issue: Information Granulation in Natural Computing

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Dominik Slezak, Andrzej Skowron:
Preface. 567-568
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Lukasz Maciura, Jan G. Bazan:
Granular computing in mosaicing of images from capsule endoscopy. 569-577
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Bozena Kostek, Adam Kupryjanow, Andrzej Czyzewski:
Knowledge representation of motor activity of patients with Parkinson's disease. 579-591
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Akinori Kanasugi, Akihiko Tsukahara, Ki Ando:
Hardware implementation of evolutionary algorithms using dynamic reconfiguration technology. 593-601
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Romi Banerjee, Sankar K. Pal:
Text comprehension and the computational mind-agencies. 603-635
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Hui Wang, Jiajin Huang, Erzhong Zhou, Zhisheng Huang, Ning Zhong:
Cognition-inspired route evaluation using mobile phone data. 637-648
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W. Richard Stark:
Random choice in amorphous processes. 649-653
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Abbas El Dor, David Lemoine, Maurice Clerc, Patrick Siarry, Laurent Deroussi, Michel Gourgand:
Dynamic cluster in particle swarm optimization algorithm. 655-672
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Bosheng Song, Tao Song, Linqiang Pan:
Time-free solution to SAT problem by P systems with active membranes and standard cell division rules. 673-681
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Ri Qu, Bingjian Shang, Yanru Bao, Dawei Song, ChunMing Teng, Zhiwei Zhou:
Multipartite entanglement in Grover's search algorithm. 683-689
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Kumar Sankar Ray, Kingshuk Chatterjee, Debayan Ganguly:
State complexity of deterministic Watson-Crick automata and time varying Watson-Crick automata. 691-699

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