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PEARC 2023: Portland, OR, USA
- Robert S. Sinkovits, Alana Romanella, Shelley Knuth, Ken Hackworth, Jeff Pummill:
Practice and Experience in Advanced Research Computing, PEARC 2023, Portland, OR, USA, July 23-27, 2023. ACM 2023, ISBN 978-1-4503-9985-2
Full Papers, Applications and Software
- Matilda Ferguson
, Lila Fontes
, Tia Newhall
:
Efficient Parallelization of Dynamic Programming for Large Applications. 1-9 - Nathan Dean Freeman
, Joe Stubbs
, Richard Cardone
, Christian Garcia
:
Detailed Functional Overview of an API and Workflow Engine for Scientific Research Computing. 10-17 - Kedarsh Kaushik
, Yuzhang Wang
, Youwei Ma
, David Carlson
, Tony Curtis
, Robert J. Harrison
, Eva Siegmann
:
From Molecular Dynamics to Oceanography - Ookami Graduate Students Porting and Tuning Science Codes for A64FX. 18-25 - Suresh Marru
, Marlon E. Pierce
, Beth Plale
, Sudhakar Pamidighantam
, Dimuthu Wannipurage
, Marcus Christie
, Isuru Ranawaka
, Eroma Abeysinghe
, Rob Quick
, Emad Tajkhorshid
, Seid Koric
, Jim Basney
, Mariano Spivak
, Barry Isralewitz
, Rafael C. Bernardi
, Diego Enry Barreto Gomes
, Giri P. Krishnan
, Maxim Bazhenov
, Shava Smallen
, Amit Majumdar
, Anton Arkhipov
, Kael Dai
, Xiao-Ping Liu
, Kenneth Yoshimoto
:
Cybershuttle: An End-to-End Cyberinfrastructure Continuum to Accelerate Discovery in Science and Engineering. 26-34 - Isuru Ranawaka
, Eroma Abeysinghe
, Dimuthu Wannipurage
, Dinuka De Silva
, Emre H. Brookes
, Suresh Marru
, Marcus Christie
, Sudhakar Pamidighantam
, Marlon E. Pierce
:
Airavata Metascheduler: A Reliable, Fault Tolerant, and Resource-Aware Job Scheduling Service. 35-42
Full Papers, Systems and System Software
- Nickolaus D. Saint
, Ryan Chard
, Rafael Vescovi
, Jim Pruyne
, Ben Blaiszik
, Rachana Ananthakrishnan
, Michael E. Papka
, Rick Wagner
, Kyle Chard
, Ian T. Foster
:
Active Research Data Management with the Django Globus Portal Framework. 43-51 - Dhruvil Deepakbhai Shah
, Rebecca Belshe
, Kirby Kuznia
, Gil Speyer
, Jason Yalim
:
Employing a Research Community Network to Assess Centralized Computing Impact. 52-59 - Zhenhua He
, Aditi Saluja
, Richard Lawrence
, Dhruva Chakravorty
, Francis Dang
, Lisa Perez
, Honggao Liu
:
Performance of Distributed Deep Learning Workloads on a Composable Cyberinfrastructure. 60-67 - Fang Liu
, Ronald Rahaman
, Michael D. Weiner
, Eric Coulter
, Deepa Phanish
, Jeffrey Valdez
, Semir Sarajlic
, Rubén Lara
, Pam Buffington
:
Semi-Automatic Hybrid Software Deployment Workflow in a Research Computing Center. 68-74 - Kevin Menear
, Ambarish Nag
, Jordan Perr-Sauer
, Monte Lunacek
, Kristi Potter
, Dmitry Duplyakin
:
Mastering HPC Runtime Prediction: From Observing Patterns to a Methodological Approach. 75-85 - Ron Merrill
, David Schanzenbach
, Sean B. Cleveland
, Gwen A. Jacobs
:
Mana - Bringing Accessible HPC to Hawai'i. 86-93 - Benjamin Michalowicz
, Kaushik Kandadi Suresh
, Hari Subramoni
, Dhabaleswar K. Panda
, Steve Poole
:
DPU-Bench: A Micro-Benchmark Suite to Measure Offload Efficiency Of SmartNICs. 94-101 - Josko Plazonic
, Jonathan Halverson
, Troy Comi
:
Jobstats: A Slurm-Compatible Job Monitoring Platform for CPU and GPU Clusters. 102-108 - Sarah Rodenbeck
, Yoon Suk Uhr
:
TicketHub: Enabling Actionable Analysis of Support Requests With NLP. 109-116 - Matthew Sgambati
, Matthew Anderson
:
Software Quality Assurance for High Performance Computing Containers. 117-128
Full Papers, Workforce Development, Training, Diversity, and Education
- Joel Cutcher-Gershenfeld
, Torey Battelle
, Dana Brunson
, Thomas E. Cheatham
, Jacob Fosso-Tande
, Douglas M. Jennewein
, Julie Ma
, Lauren A. Michael
, Timothy Middelkoop
, Henry Neeman
, Patrick Schmitz
:
Professionalization of Research Computing and Data: An Expanded Agenda. 129-136 - John K. Holmen
, Verónica G. Vergara Larrea
, Erik W. Draeger
, Eric T. Phipps
, Philip J. Smith
, Martin Berzins
, Sean T. Smith
, Jeremy N. Thornock
, Suzanne Parete-Koon
:
Strengthening the US Department of Energy's Recruitment Pipeline: The DOE/NNSA Predictive Science Academic Alliance Program (PSAAP) Experience. 137-144 - Christina Maimone
, Carrie Brown
, Kimberly Grash
, Chris Reidy
, Ashley Stauffer
:
Compensation of Academic Research Computing and Data Professionals. 145-152 - Tonya Miles
, Lizanne DeStefano
, Julie Wernert
:
A Longitudinal Study of XSEDE HPC Workshops. 153-160 - Kinning Poon
, Solomon T. C. Chak
, Mohamed Khalefa
, Christos Noutsos
, Shebuti Rayana
, Renu Balyan
:
Undergraduate Student Motivation in Research, Science, and Post-Bachelor Education. 161-168
Short Papers, Applications and Software
- Eroma Abeysinghe
, Cameron W. Smith
, Liang Wang
, James Juno
, Matthew Mccall
, Marlon E. Pierce
, Mark S. Shephard
:
Defining a Cyberinfrastructure for Plasma Science and Space Weather Simulations. 169-172 - Timothy J. Boerner
, Stephen Deems
, Thomas R. Furlani
, Shelley L. Knuth
, John Towns
:
ACCESS: Advancing Innovation: NSF's Advanced Cyberinfrastructure Coordination Ecosystem: Services & Support. 173-176 - Katie Chapman
, Guangchen Ruan
, Esen Tuna
, Alan Walsh
, Eric A. Wernert
:
Scholarly Data Share 2.0: Granular Access to Research Data. 177-180 - Marcus Christie
, Suresh Marru
, Sudhakar Pamidighantam
, Isuru Ranawaka
, Dimuthu Wannipurage
:
Airavata Data Catalog: A Multi-tenant Metadata Service for Efficient Data Discovery and Access Control. 181-185 - Catherine Feldman
, Smeet Chheda
, Alan C. Calder
, Eva Siegmann
, John Dey
, Tony Curtis
, Robert J. Harrison
:
A Further Study of Linux Kernel Hugepages on A64FX with FLASH, an Astrophysical Simulation Code. 186-195 - Tiffany Huff
, Austin Darrow
, Joshua Medina
, Erik S. Ferlanti
, James D. Carson
, John M. Fonner
, Sal Tijerina
, Stanley J. Watowich
, William J. Allen
:
Scalable and Reproducible Virtual Screening through an API-Integrated Workflow. 196-199 - Samuel Khuvis
, Karen Tomko
, Scott R. Brozell
, Chen-Chun Chen
, Hari Subramoni
, Dhabaleswar K. Panda
:
Optimizing Amber for Device-to-Device GPU Communication. 200-205 - Richard Knepper
, Sara C. Pryor
, Bennett Wineholt
, Melissa Bukovsky
, Jared Lee
, Xin Zhou
:
The I-WRF Framework: Containerized Weather Modeling, Validation, and Verification. 206-210 - Iman Ataee Langroudy
, Marinus Pennings
, Dhruva Chakravorty
, Honggao Liu
:
CIBot: Integrating and Automating Researcher Support in Cyberinfrastructure Helpdesk Operations. 211-215 - Richard Lawrence
, Dhruva K. Chakravorty
, Zhenhua He
, Francis Dang
, Lisa M. Perez
, Wesley A Brashear
, Honggao Liu
:
Developing Synthetic Applications Benchmarks on Composable Cyberinfrastructure: A Study of Scaling Molecular Dynamics Applications on GPUs. 216-220 - Sambit Mishra
, Freddie D. Witherden
, Dhruva Chakravorty
, Lisa Perez
, Francis Dang
:
Scaling Study of Flow Simulations on Composable Cyberinfrastructure. 221-225 - Jung Who Nam
, Gregory D. Abram
, Francesca Samsel
, Paul A. Navrátil
:
Immersive OSPRay: Enabling VR Experiences with OSPRay. 226-230 - Abhinand Nasari
, Lujun Zhai
, Zhenhua He
, Hieu Le
, Suxia Cui
, Dhruva Chakravorty
, Jian Tao
, Honggao Liu
:
Porting AI/ML Models to Intelligence Processing Units (IPUs). 231-236 - Sudhakar Pamidighantam
, Dinuka De Silva
, Marcus Christie
, Barry I. Schneider
, Armin Scrinzi
, Simran Mhatre
:
Advanced Application user interfaces for time-dependent Recursive indeXing (tRecX) Code: from Design to Production Deployment. 237-241 - Shawn Rice
, Zachary Weidner
, Patrick Mulligan:
Climate Change In A Composable Cloud Environment: Re-Architecting A Legacy Meteorological Gateway For A Rapidly Evolving Computing Environment. 242-245 - Igor Sfiligoi
, Emily A. Belli
, Jeff Candy
, Reuben D. Budiardja
:
Optimization and Portability of a Fusion OpenACC-based FORTRAN HPC Code from NVIDIA to AMD GPUs. 246-250 - Edwin Skidmore
, Michele Cosi
, Tyson Lee Swetnam
, Nirav C. Merchant
, Zhouyun Xu
, Illyoung Choi
, Sean Davey
, Jeremy Frady
, Mariah Wall
, Michelle Yung
:
Cloud Computing for Research and Education Gets a Sweet Upgrade with CACAO. 251-254 - Mei-Yu Wang
, Julian A. Uran
, Paola Buitrago
:
Deep Learning Benchmark Studies on an Advanced AI Engineering Testbed from the Open Compass Project. 255-259 - Aaron Watters
:
H5Gizmos User Interfaces: An Embryology Microscopy Use Case. 260-263 - Leonard F. Wisniewski
, Aday Bujeda
, Sarah Duncan
, William Horka
, Emily Lawrence
, Michael Reekie
, Evan Sarmiento
, Tania Schlatter
, Alan Chalker
, Jeffrey Ohrstrom
:
Augmenting the User Experience in Open OnDemand. 264-268 - Matt Yoder
, Juan Puerto
:
Visualizing the Future of Louisiana's Coastline. 269-272
Short Papers, Systems and System Software
- Subil Abraham
:
The HPC Container Experience on the Summit Supercomputer. 273-277 - Rommie E. Amaro
, Jiunn-Yeu Chen
, Javier M. Duarte
, Thomas E. Hutton
, Christopher Irving
, Martin C. Kandes
, Amit Majumdar
, Dmitry Y. Mishin
, Mai H. Nguyen
, Paul Rodríguez
, Fernando Silva
, Robert S. Sinkovits
, Shawn M. Strande
, Mahidhar Tatineni
, Leon Si Tran
, Nicole Wolter
:
Voyager - An Innovative Computational Resource for Artificial Intelligence & Machine Learning Applications in Science and Engineering. 278-282 - Rachana Ananthakrishnan
, Josh Bryan
, Kyle Chard
, Ryan Chard
, Kurt McKee
, Ada Nikolaidis
, Jim Pruyne
, Stephen Rosen
, Ian T. Foster
:
Globus Timers: Scheduling Periodic Data Management Actions on Distributed Research Infrastructure. 283-287 - Fabio Andrijauskas
, Igor Sfiligoi
, Frank Würthwein
:
Defining a canonical unit for accounting purposes. 288-291 - Alan Chalker
:
A Cookbook for Making Time-Lapse Videos of Research Computing Installs. 292-295 - Douglas M. Jennewein
, Johnathan Lee
, Chris Kurtz
, William Dizon
, Ian Shaeffer
, Alan Chapman
, Alejandro Chiquete
, Josh Burks
, Amber Carlson
, Natalie Mason
, Arhat Kobawala
, Thirugnanam Jagadeesan
, Praful Bhargav Basani
, Torey Battelle
, Rebecca Belshe
, Deb McCaffrey
, Marisa Brazil
, Chaitanya Inumella
, Kirby Kuznia
, Jade Buzinski
, Dhruvil Deepakbhai Shah
, Sean M. Dudley
, Gil Speyer
, Jason Yalim
:
The Sol Supercomputer at Arizona State University. 296-301 - Md. Jobair Hossain Faruk
, Bilash Saha
, Jim Basney
:
A Comparative Analysis Between SciTokens, Verifiable Credentials, and Smart Contracts: Novel Approaches for Authentication and Secure Access to Scientific Data. 302-305 - Shin F. Leong
, Craig S. Pohl
:
Traditional High-Performance Computing with Container Technology (THPC): HPC using Container Technology, EasyBuild, Spack, and IBM LSF scheduler. 306-311 - Sean Maxwell
, Mike Warfe
, Hadrian Djohari
:
dug: A Tool for Illuminating Disk Usage in HPC Environments. 312-314 - Erick Joel McGhee
, Stephen Milton
:
FASTQ File Compression Benchmarking Using Lossless General Purpose Algorithms. 315-319 - Ryo Nakamura
, Yohei Kuga
:
Multi-threaded scp: Easy and Fast File Transfer over SSH. 320-323 - Geoffrey Ryan Sablosky
:
Rebuilding Bridges: The tools used to deploy and maintain Bridges-2. 324-327 - David Schanzenbach
, Ronald Merrill
, Sean B. Cleveland
, Gwen A. Jacobs
:
Integrated Advanced Computing Management Interface (IACMI): A Web Portal to Democratize HPC Management. 328-331 - Igor Sfiligoi
, Daniel McDonald
, Rob Knight
, Frank Würthwein
:
Testing GitHub projects on custom resources using unprivileged Kubernetes runners. 332-335 - Anurag Shankar
, David Y. Hancock
, Scott Michael
, Laura Huber
, Joseph Butler
, Robert Henschel
, Craig A. Stewart
:
Security Standards and use of Cyberinfrastructure Systems in Clinical Research. 336-340 - Manikya Swathi Vallabhajosyula
, Rajiv Ramnath
:
Insights from the HARP Framework: Using an AI-Driven Approach for Efficient Resource Allocation in HPC Scientific Workflows. 341-344
Short Papers, Workforce Development, Training, Diversity, and Education
- Dhruva Chakravorty
, Wesley A Brashear
, Sharon Broude Geva
, Sarah K. Janes
, James V. Howell
, Ralph Zottola
, Lisa Perez
, Scotty Strachan
, Forough Ghahramani
, Honggao Liu
, Amy Schultz
, Yuanqi Jing
, Rajiv Malkan
, Tim Cockerill
:
Emerging Needs for Advanced Cyberinfrastructure at Under Resourced Institutions: Findings from a National Workshop on Expanding Computing Using Collaborative Models. 345-349 - Dhruva Chakravorty
, Sarah K. Janes
, Wesley A Brashear
, Sharon Broude Geva
, Scotty Strachan
, Forough Ghahramani
, James V. Howell
, Ralph Zottola
, Lisa Perez
, Honggao Liu
, Amy Schultz
, Tim Cockerill
:
Improving Access to Advanced Cyberinfrastructure Using Regional Computing Collaborations and People Networks: Recommendations from a National Workshop on Expanding Computing Using Collaborative Models. 350-354 - Eric Coulter
, Richard Knepper
, Resa Reynolds
, Stephen Bird
, Tabitha Kripa Samuel
, Winona Snapp-Childs
:
Campus Bridging in the Age of COVID-19. 355-358 - Daniel T. Dietz
, Darshan Sarojini
, Aroua Gharbi
, Le Mai Weakley
:
Scaling Up: Growth of the Indy Student Cluster Competition. 359-362 - AJ Lauer
, Max Cordes Galbraith
, Milana Wolff
, David L. Hart
:
The Inclusive Conferences Survey: Analysis and validation of inclusivity at HPC conferences. 363-366 - Tyler L. McIntosh
, Erick Verleye
, Jennifer K. Balch
, Megan E. Cattau
, Nayani T. Ilangakoon
, Nathan Korinek
, R. Chelsea Nagy
, James Sanovia
, Edwin Skidmore
, Tyson L. Swetnam
, Ty Tuff
, Nathan Quarderer
, Carol A Wessman
:
Cyberinfrastructure deployments on public research clouds enable accessible Environmental Data Science education. 367-373 - Timothy Middelkoop
, Claire Mizumoto
, Scotty Strachan
, D. Balamurugan
, Scott Delinger
, Jacob Fosso-Tande
, Deb McCaffrey
, Ann Myatt James
, David Reddy
, Patrick Schmitz
:
Career Phases in Research Computing and Data. 374-377 - Julia S. Mullen
, Lauren Milechin
:
A Data Driven Approach to Informal HPC Training Evaluation. 378-381 - Darshan Sarojini
, Cyd Burrows-Schilling
, Kimberly Thomas
, Claire Mizumoto
:
Towards Developing a Guide to Choosing National High-Performance Computing Resources. 382-385 - Jeffrey Weekley
, Sri Kurniawan
:
Towards a Human-centered Tutorial Design for the Nautilus Cluster. 386-389 - Mary P. Thomas
, Andreas W. Götz
, Martin C. Kandes
, Mai H. Nguyen
, Paul Rodríguez
, Peter W. Rose
, Robert S. Sinkovits
:
Developing a Best Practices Training Program in Cyberinfrastructure-Enabled Machine Learning Research. 390-394
Visualization Short Papers
- Scott Birch
, Eric A. Wernert
, Keith Danielson
, Gabriel Filippelli
, Jonathan Hines
:
Visualizing the Causes and Impacts of Climate Change with XR Technologies. 395-399 - Nicholas Brunhart-Lupo
, Kenny Gruchalla
:
Immersive Particle Advection: Through the Scales of Renewable Energy. 400-404 - Jade Buzinski
, Jason Yalim
:
Spatiotemporal analysis of laboratory-generated turbulence. 405-408 - Dhruvil Deepakbhai Shah
, Gil Speyer
, Jason Yalim
:
Visualization of Research Community Networks. 409-412 - Don Engel
, Jacob Rubinstein
:
Drones, Phones, and Stones: Visualization for Collaborative Digitization of Historic Cemeteries. 413-416 - John Connor Mulligan
:
Visualizing the Origins, Itineraries, and Destinations of 94, 910 Liberated Africans (1807-1862): A custom interactive map for dynamically aggregating and disaggregating a sparse historical dataset. 417-421 - Scott Pearse
, Amy DeCastro
, Timothy W. Juliano
:
Visualizing Megafires: How AI can be used to drive wildfire simulations with better predictive skill. 422-423 - Scott Pearse
, Gustavo Marques
:
Visualizing NeverWorld2: A set of ocean simulations to study mesoscale eddies across resolutions. 424-425 - Francesca Samsel
, Greg Abram
, Lauren Gant
, Wilbert Weijer
, Milena Veneziani
:
Atmospheric Rivers: Changes in Arctic Sea Ice. 426-428 - Naomi Tack
, Rebecca Williams
, Nicholas Holschuh
, Sharad Sharma
, Don Engel
:
Visualizing the Greenland Ice Sheet in VR using Immersive Fence Diagrams. 429-432
Posters
- Edith Ameh
, Anne Bowen:
Youth Homelessness: Researching VR as a Tool for Empathy. 433-436 - Ritu Arora
, Subhashini Sivagnanam
:
Towards Building a CyberInfrastructure for Facilitating the Assessment, Dissemination, Discovery, & Reuse of Software and Data Products. 437-438 - Payas Bhutra
, Yucheng Zhang
, Shawn Rice
, Yang Hong
, Guangzhen Jin
, Nannan Shan
, Ruyi Li
:
Scientific applications and their documentation on Purdue clusters. 439-441 - Noushin Ghaffari
, Swaathi Suguna Venkatesh
, Rabeya Nazara
, Oluwaseyi Oladejo
, Rakshith Puligundla Venugopal
, Stephen J. Gaughran
, Bridgett M. Vonholdt
:
Workflow for Understanding the Phenotypic Characteristics of Seals by Epigenetic Analysis. 442-444 - Noushin Ghaffari
, Lijie Zhou
, Catherine M. Mageeney
, Kelly Porter Williams
:
Exploring Unsupervised Machine Learning Techniques for Genomic Island Categorization. 445-447 - Duong Thuy Hoang
, Paul Rulis
:
Machine Learning Potential Function Generation for ab initio Electronic Structure Calculations. 448-449 - Maria Kalyvaki
, Dequindre Spencer
:
What do women in IT want?: Women in IT Networking and their experience working from home during the Covid-19 pandemic. 450-452 - Jaelyn Litzinger
, Roy Hallquist
, James Tessmer
:
HPC Monitoring & Visualization: Understanding usage of HPC systems. 453-456 - Amit Majumdar
, Subhashini Sivagnanam
, Kenneth Yoshimoto
, Steven Yeu
, Marty Kandes
, Dong Ju Choi
, Ted Carnevale
:
Neuroscience Gateway - Software Dissemination and Large-Scale Modeling and Data Processing on Supercomputing Resources. 457-459 - Caetano Melone
, Steve Jones
:
Verifying Functionality and Performance of HPC Applications with Continuous Integration. 460-462 - Kevin Menear
, Dmitry Duplyakin
:
Is Knowledge about Running Applications Helping Improve Runtime Prediction of HPC Jobs? 463-465 - Michael Milligan
, Graham T. Allan
, Nicholas J. H. Dunn
, Matt Mix
:
Comparing Open Ondemand and Jupyterhub as Interactive HPC Gateways. 466-468 - Luke Monroe
:
Defining a Mid-Career Cross-Industry Shift into HPC Engineering. 469 - Angela P. Murillo
, Don Brower
, Sarowar Hossain
, Kerk F. Kee
, Anirban Mandal
, Jarek Nabrzyski
, Erik Scott
, Nicole K. Virdone
, Rodney Ewing
, Ewa Deelman
:
Broadening Student Engagement To Build the Next Generation of Cyberinfrastructure Professionals. 470-473 - Sri Ranganathan Palaniappan
, Varun Pateel
, Sam Jijina
, Jeffrey Young
, Hyesoon Kim
:
Unified Co-Simulation Framework for Autonomous UAVs. 474-477 - Mats Rynge
, Karan Vahi
, Mohammad Zaiyan Alam
, Ewa Deelman
, Todd Miller
, Miron Livny
, Shelley Knuth
, James Griffioen
, John Goodhue
, Dávid Hudák, Julie Ma
, Andrew Pasquale
, Lissie Fein
:
ACCESS Pegasus: Bringing Workflows to the ACCESS Masses. 478-480 - Fatema Shormin
, Noushin Ghaffari
, Catherine M. Mageeney
, Kelly Porter Williams
:
Comparative Computational Approach for Evaluating Transposon Detection in Genomic Data. 481-482 - Manikya Swathi Vallabhajosyula
, Rajiv Ramnath
:
Towards Characterizing DNNs to Estimate Training Time using HARP (HPC Application Resource (runtime) Predictor. 483-485 - Evan Wilcox
, Anne Bowen
, Mike Packard
:
Understanding Encryption & SSH Cipher Benchmarking. 486-488
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