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12. RECOMB 2008: Singapore
- Martin Vingron, Limsoon Wong:
Research in Computational Molecular Biology, 12th Annual International Conference, RECOMB 2008, Singapore, March 30 - April 2, 2008. Proceedings. Lecture Notes in Computer Science 4955, Springer 2008, ISBN 978-3-540-78838-6 - Temple F. Smith:
Computational Biology: Its Challenges Past, Present, and Future. 1-2 - Caroline C. Friedel
, Jan Krumsiek, Ralf Zimmer
Bootstrapping the Interactome: Unsupervised Identification of Protein Complexes in Yeast. 3-16 - Sourav Chatterji, Ichitaro Yamazaki, Zhaojun Bai, Jonathan A. Eisen
CompostBin: A DNA Composition-Based Algorithm for Binning Environmental Shotgun Reads. 17-28 - Yu Zhang, Giltae Song
Reconstructing the Evolutionary History of Complex Human Gene Clusters. 29-49 - Paul Medvedev, Michael Brudno:
Ab Initio Whole Genome Shotgun Assembly with Mated Short Reads. 50-64 - Howard Cedar:
Orchestration of DNA Methylation. 65 - Tien-ho Lin, Pradipta Ray
BayCis: A Bayesian Hierarchical HMM for Cis-Regulatory Module Decoding in Metazoan Genomes. 66-81 - Yanxin Shi, Itamar Simon, Tom M. Mitchell, Ziv Bar-Joseph
A Combined Expression-Interaction Model for Inferring the Temporal Activity of Transcription Factors. 82-97 - Raluca Gordân, Leelavati Narlikar, Alexander J. Hartemink:
A Fast, Alignment-Free, Conservation-Based Method for Transcription Factor Binding Site Discovery. 98-111 - John Hawkins
The Statistical Power of Phylogenetic Motif Models. 112-126 - Edison T. Liu:
Transcriptional Regulation and Cancer Genomics. 127 - Fuhui Long, Hanchuan Peng, Xiao Liu, Stuart K. Kim, Gene Myers:
Automatic Recognition of Cells (ARC) for 3D Images of C. elegans. 128-139 - Ritendra Datta, Marshall W. Bern:
Spectrum Fusion: Using Multiple Mass Spectra for De Novo Peptide Sequencing. 140-153 - Yu Lin
A Fragmentation Event Model for Peptide Identification by Mass Spectrometry. 154-166 - Yong Fuga Li, Randy J. Arnold, Yixue Li, Predrag Radivojac, Quanhu Sheng, Haixu Tang:
A Bayesian Approach to Protein Inference Problem in Shotgun Proteomics. 167-180 - Nuno Bandeira, Julio Ng, Dario Meluzzi, Roger G. Linington
De Novo Sequencing of Nonribosomal Peptides. 181-195 - Sang Yup Lee
Systems Metabolic Engineering. 196 - Mustafa Kirac
Protein Function Prediction Based on Patterns in Biological Networks. 197-213 - Jason Flannick, Antal F. Novak, Chuong B. Do, Balaji S. Srinivasan, Serafim Batzoglou:
Automatic Parameter Learning for Multiple Network Alignment. 214-231 - Michael R. Mehan, Juan Nunez-Iglesias
An Integrative Network Approach to Map the Transcriptome to the Phenome. 232-245 - Maxim Kalaev, Vineet Bafna
Fast and Accurate Alignment of Multiple Protein Networks. 246-256 - Michael Baym
High-Resolution Modeling of Cellular Signaling Networks. 257-271 - Andrei N. Lupas:
At the Origin of Life: How Did Folded Proteins Evolve? 272 - J. Gordon Burleigh, Mukul S. Bansal
Locating Multiple Gene Duplications through Reconciled Trees. 273-284 - Jing Zhang, Xin Gao
Rapid and Accurate Protein Side Chain Prediction with Local Backbone Information. 285-299 - Wei Zheng, Alan M. Friedman, Chris Bailey-Kellogg:
Algorithms for Joint Optimization of Stability and Diversity in Planning Combinatorial Libraries of Chimeric Proteins. 300-314 - Christophe Dessimoz
DLIGHT - Lateral Gene Transfer Detection Using Pairwise Evolutionary Distances in a Statistical Framework. 315-330 - Sebastian Böcker
Computation of Median Gene Clusters. 331-345 - Suzanne Cory:
BCL-2: From Translocation to Therapy. 346 - Igor Ulitsky, Richard M. Karp, Ron Shamir
Detecting Disease-Specific Dysregulated Pathways Via Analysis of Clinical Expression Profiles. 347-359 - Delbert Dueck, Brendan J. Frey, Nebojsa Jojic, Vladimir Jojic, Guri Giaever, Andrew Emili, Gabe Musso
Constructing Treatment Portfolios Using Affinity Propagation. 360-371 - Michael Sammeth, Gabriel Valiente
Bubbles: Alternative Splicing Events of Arbitrary Dimension in Splicing Graphs. 372-395 - Bin Ma, Xiaoming Sun
More Efficient Algorithms for Closest String and Substring Problems. 396-409 - Denis Smirnov, Vivian G. Cheung:
Disruption of a Transcriptional Regulatory Pathway Contributes to Phenotypes in Carriers of Ataxia Telangiectasia. 410 - Oliver Stegle
Accounting for Non-genetic Factors Improves the Power of eQTL Studies. 411-422 - Andreas Sundquist, Eugene Fratkin, Chuong B. Do, Serafim Batzoglou:
Effects of Genetic Divergence in Identifying Ancestral Origin Using HAPAA. 423 - Sriram Sankararaman, Gad Kimmel, Eran Halperin, Michael I. Jordan
On the Inference of Ancestries in Admixed Populations. 424-433 - Eleazar Eskin:
Increasing Power in Association Studies by Using Linkage Disequilibrium Structure and Molecular Function as Prior Information. 434 - Sivan Bercovici, Dan Geiger, Liran Shlush, Karl Skorecki, Alan A. Templeton
Panel Construction for Mapping in Admixed Populations Via Expected Mutual Information. 435-449 - Leo van Iersel, Judith Keijsper, Steven Kelk, Leen Stougie, Ferry Hagen
Constructing Level-2 Phylogenetic Networks from Triplets. 450-462 - Rune B. Lyngsø, Yun S. Song, Jotun Hein:
Accurate Computation of Likelihoods in the Coalescent with Recombination Via Parsimony. 463-477
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