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5th ISMB 1997: Halkidiki, Greece
- Terry Gaasterland, Peter D. Karp, Kevin Karplus, Christos A. Ouzounis, Chris Sander, Alfonso Valencia:
Proceedings of the 5th International Conference on Intelligent Systems for Molecular Biology, Halkidiki, Greece, June 21-26, 1997. AAAI 1997, ISBN 1-57735-022-7 - Carolyn F. Allex, Schuyler F. Baldwin, Jude W. Shavlik, Frederick R. Blattner:
Increasing Consensus Accuracy in DNA Fragment Assemblies by Incorporating Fluorescent Trace Representations. 3-14 - Russ B. Altman, Neil F. Abernethy, Richard O. Chen:
Standardized Representations of the Literature: Combining Diverse Sources of Ribosomal Data. 15-24 - Miguel A. Andrade, Alfonso Valencia:
Automatic Annotation for Biological Sequences by Etraction of Keywords from MEDLINE Abstracts: Development of a Prototype System. 25-32 - Rolf Apweiler, Alain Gateau, Sergio Contrino, Maria Jesus Martin, Vivien Junker, Claire O'Donovan, Fiona Lang, Nicoletta Mitaritonna, Stephanie Kappus, Amos Bairoch:
Protein Sequence Annotation in the Genome Era: The Annotation Concept of SWISS-PROT + TREMBL. 33-43 - P. Arrigo, Piero Fariselli, Rita Casadio:
Self-Organizing Neural Maps of the Coding Sequences of G-protein-coupled Receptors Reveal Local Domains Associated with Potentially Functional Determinants in the Proteins. 44-47 - Minoru Asogawa:
Beta-Sheet Prediction Using Inter-Strand Residue Pairs and Refinement with Hopfield Neural Network. 48-51 - John Biggs, Calton Pu, Philip E. Bourne:
Code Generation through Annotation of Macromolecular Structure Data. 52-55 - Ewan Birney, Richard Durbin:
Dynamite: A Flexible Code Generating Language for Dynamic Programming Methods Used in Sequence Comparison. 56-64 - Alvis Brazma, Jaak Vilo, Esko Ukkonen, Kimmo Valtonen:
Data Mining for Regulatory Elements in Yeast Genome. 65-74 - Vladimir Brusic, Christian Schönbach, Masafumi Takiguchi, Victor Ciesielski, Leonard C. Harrison:
Application of Genetic Search in Derivation of Matrix Models of Peptide Binding to MHC Molecules. 75-83 - Richard O. Chen, Ramon M. Felciano, Russ B. Altman:
RIBOWEB: Linking Structural Computations to a Knowledge Base of Published Experimental Data. 84-87 - Jan Cupal, Christoph Flamm, Alexander Renner, Peter F. Stadler:
Density of States, Metastable States, and Saddle Points: Exploring the Energy Landscape of an RNA Molecule. 88-91 - Marie desJardins, Peter D. Karp, Markus Krummenacker, Thomas J. Lee, Christos A. Ouzounis:
Prediction of Enzyme Classification from Protein Sequence without the Use of Sequence Similarity. 92-99 - Valentina Di Francesco, Philip McQueen, Jean Garnier, Peter J. Munson:
Incorporating Global Information into Secondary Structure Prediction with Hidden Markov Models of Protein Folds. 100-103 - Inna Dubchak, Ilya B. Muchnik, Sung-Hou Kim:
Protein Folding Class Predictor for SCOP: Approach Based on Global Descriptors. 104-107 - Jérôme Euzenat, Christophe Chemla, Bernard Jacq:
A Knowledge Base for D. melanogaster Gene Interactions Involved in Pattern Formation. 108-119 - Jan Gorodkin, Laurie J. Heyer, Gary D. Stormo:
Finding Common Sequence and Structure Motifs in a Set of RNA Sequences. 120-123 - Xiaojun Guan:
Domain Identification by Clustering Sequence Alignments. 124-130 - Henning Hermjakob, Robert Giegerich, Walter Arnold:
RIFLE: Rapid Identification of Microorganisms by Fragment Length Evaluation. 131-139 - Liisa Holm, Chris Sander:
Decision Support System for the Evolutionary Classification of Protein Structures. 140-146 - Paul Horton, Kenta Nakai:
Better Prediction of Protein Cellular Localization Sites with the it k Nearest Neighbors Classifier. 147-152 - Lawrence Hunter, Barry Zeeberg:
Identifying Chimerism in Proteins Using Hidden Markov Models of Codon Usage. 153-156 - Thomas R. Ioerger:
The Context-Dependence of Amino Acid Properties. 157-166 - Ina Koch, Thomas Lengauer:
Detection of Distant Structural Similarities in a Set of Proteins Using a Fast Graph-Based Method. 167-178 - Anders Krogh:
Two Methods for Improving Performance of a HMM and their Application for Gene Finding. 179-186 - Francisco Melo, Damien Devos, Eric Depiereux, Ernest Feytmans:
ANOLEA: A WWW Server to Assess Protein Structures. 187-190 - Brendan Mumey:
A Fast Heuristic Algorithm for a Probe Mapping Problem. 191-197 - Peter J. Munson, Raj K. Singh:
Multi-Body Interactions within the Graph of Protein Structure. 198-201 - Craig G. Nevill-Manning, Komal S. Sethi, Thomas D. Wu, Douglas L. Brutlag:
Enumerating and Ranking Discrete Motifs. 202-209 - Pierre Nicodème, Jean-Marc Steyaert:
Selecting Optimal Oligonucleotide Primers for Multiplex PCR. 210-213 - Tamotsu Noguchi, Kentaro Onizuka, Yutaka Akiyama, Minoru Saito:
PDB-REPRDB: A Database of Representative Protein Chains in PDB (Protein Data Bank). 214-217 - Yoshihiro Ohta, Yasunori Yamamoto, Tomoko Okazaki, Ikuo Uchiyama, Toshihisa Takagi:
Automatic Construction of Knowledge Base from Biological Papers. 218-225 - Anders Gorm Pedersen, Henrik Nielsen:
Neural Network Prediction of Translation Initiation Sites in Eukaryotes: Perspectives for EST and Genome Analysis. 226-233 - Manuel C. Peitsch:
Large Scale Protein Modeling and Model Repository. 234-236 - David W. Ritchie, Graham J. L. Kemp:
Modeling Antibody Side Chain Conformations Using Heuristic Database Search. 237-240 - John Alan Robinson, Tomas P. Flores:
Novel Techniques for Visualizing Biological Information. 241-249 - Patricia Rodriguez-Tomé, Carsten Helgesen, Philip Lijnzaad, Kim Jungfer:
A CORBA Server for the Radiation Hybrid Database. 250-253 - Kenji Satou, Toshihide Ono, Yoshihisa Yamamura, Emiko Furuichi, Satoru Kuhara, Toshihisa Takagi:
Extraction of Substructures of Proteins Essential to their Biological Functions by a Data Mining Technique. 254-257 - Thomas Schiex, Christine Gaspin:
CARTHAGENE: Constructing and Joining Maximum Likelihood Genetic Maps. 258-267 - Jonathan Schug, G. Christian Overton:
Modeling Transcription Factor Binding Sites with Gibbs Sampling and Minimum Description Length Encoding. 268-271 - Steffen Schulze-Kremer:
Adding Semantics to Genome Databases: Towards an Ontology for Molecular Biology. 272-275 - Imran Shah, Lawrence Hunter:
Predicting Enzyme Function from Sequence: A Systematic Appraisal. 276-283 - Amit Pal Singh, Douglas L. Brutlag:
Hierarchical Protein Structure Superposition Using Both Secondary Structure and Atomic Representations. 284-293 - Victor V. Solovyev, Asaf A. Salamov:
The Gene-Finder Computer Tools for Analysis of Human and Model Organisms Genome Sequences. 294-302 - Jens Stoye, Dirk Evers, Folker Meyer:
Generating Benchmarks for Multiple Sequence Alignments and Phylogenic Reconstructions. 303-306 - M. Sullivan, Janice I. Glasgow, Evan W. Steeg, Laurence Leherte, Suzanne Fortier:
Protein Model Representation and Construction. 307-310 - Jack E. Tabaska, Gary D. Stormo:
Automated Alignment of RNA Sequences to Pseudoknotted Structures. 311-318 - Hiroshi Tanaka, Fengrong Ren, Toshitsugu Okayama, Takashi Gojobori:
Inference of Molecular Phylogenetic Tree Based on Minimum Model-Based Complexity Method. 319-328 - Yutaka Ueno, Kiyoshi Asai:
A New Plug-In Software Architecture Applied for a Portable Molecular Structure Browser. 329-332 - D. Roland Walker, Eugene V. Koonin:
SEALS: A System for Easy Analysis of Lots of Sequences. 333-339 - Michael J. Wise, Tim Littlejohn, Ian Humphery-Smith:
Better Cutters for Protein Mass Fingerprinting: Preliminary Findings. 340-343 - Ying Xu, Richard J. Mural, Edward C. Uberbacher:
Inferring Gene Structures in Genomic Sequences Using Pattern Recognition and Expressed Sequence Tags. 344-353 - Tetsushi Yada, Yasushi Totoki, Takahiro Ishii, Kenta Nakai:
Functional Prediction of B. subtilis Genes from Their Regulatory Sequences. 354-357 - Jun Zhu, Jun S. Liu, Charles E. Lawrence:
Bayesian Adaptive Alignment and Inference. 358-368
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