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CIBCB 2009: Nashville, TN, USA
- Proceedings of the 2009 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2009, Nashville, TN, USA, March 30 - April 2, 2009. IEEE 2009, ISBN 978-1-4244-2756-7
- Denny C. Dai, Herbert H. Tsang
, Kay C. Wiese:
rnaDesign: Local search for RNA secondary structure design. 1-7 - Herbert H. Tsang
SARNA-ensemble-predict: The effect of different dissimilarity metrics on a novel ensemble-based RNA secondary structure prediction algorithm. 8-15 - Denny C. Dai, Kay C. Wiese:
Performance prediction for RNA design using parametric and non-parametric regression models. 16-23 - Tianhua Wu, Zhidong Deng, Dandan Song:
An approach for RNA secondary structure prediction based on Bayesian network. 24-30 - Dongsheng Che, Haibao Tang
Haplotype inference using a genetic algorithm. 31-37 - Daniel A. Ashlock, Sheridan K. Houghten:
DNA error correcting codes: No crossover. 38-45 - Isye Arieshanti, Mikael Bodén
Detecting sequence and structure homology via an integrative kernel: A case-study in recognizing enzymes. 46-52 - Hao Zheng, Hongwei Wu:
A novel LDA and PCA-based hierarchical scheme for metagenomic fragment binning. 53-59 - Daniel A. Ashlock, Colin Lee:
Using diffusion characters for the taxonomy of self-organizing social networks. 60-67 - Julia Koehler, Ralf Mueller, Jens Meiler:
Improved prediction of trans-membrane spans in proteins using an artificial neural network. 68-74 - Vojislav Kecman, Tao Yang:
Protein fold recognition with adaptive local hyperplane algorithm. 75-78 - Leong Lee, Jennifer L. Leopold, Ronald L. Frank, Anne M. Maglia
Protein secondary structure prediction using rule induction from coverings. 79-86 - Md. Shihabuddin Sadi, Abu Z. Mohammad Sami, Imtiaz Uddin Ahmed, Abdullahil Baki Md. Ruhunnabi, Nirmalendu Das:
Bioinformatics: Implementation of a proposed upgraded Smith-Waterman algorithm for local alignment. 87-91 - Daniel A. Ashlock, Taika von Königslöw:
Diagnostic character location within the cryptic skipper butterfly species complex with an evolutionary algorithm. 92-99 - Jiang Tian, Hong Gu, Wenqi Liu:
A method for improving protein localization prediction from datasets with outliers. 100-105 - Linda Fiaschi
A framework for the application of decision trees to the analysis of SNPs data. 106-113 - Junwei Ma, Wenqi Liu, Hong Gu:
Predicting protein subcellular locations for Gram-negative bacteria using neural networks ensemble. 114-120 - Bernardo Penna Resende de Carvalho, Thais Melo Mendes, Ricardo de Souza Ribeiro, Ricardo Fortuna, José Marcos Veneroso, Maurício de Alvarenga Mudado:
A system for recognition of biological patterns in toxins using computational intelligence. 121-127 - Raul Cruz-Cano, Ming-Ying Leung
Comparison of feature selection techniques for viral DNA replication origin prediction. 128-134 - Waleed Aljandal, William H. Hsu, Jing Xia:
Predicting protein-protein interactions using numerical associational features. 135-139 - Daniel A. Ashlock, Wendy Ashlock:
Simulation of the impact of retroviruses on genome organization of an artificial organism. 140-146 - Dolly Sharma
A Simple Algorithm for (l, d) Motif Search1. 148-154 - Dolly Sharma
Degenerate primer selection algorithms. 155-162 - Fadhl M. Al-Akwaa, Yasser M. Kadah
An automatic gene ontology software tool for bicluster and cluster comparisons. 163-167 - Arun Ravindran, Daniel J. Burns:
A multi-threaded DNA tag/anti-tag library generator for multi-core platforms. 168-175 - Chun-Gui Xu, KunHong Liu, De-Shuang Huang:
The analysis of microarray datasets using a genetic programming. 176-181 - Haixin Wang, Lijun Qian, Edward R. Dougherty:
Steady-state analysis of genetic regulatory networks modeled by nonlinear ordinary differential equations. 182-185 - Youlian Pan
Goal Driven Analysis of cDNA Microarray Data. 186-192 - Amin Assareh, L. Gwenn Volkert:
Fuzzy rule base classifier fusion for protein mass spectra based ovarian cancer diagnosis. 193-199 - Jaine K. Blayney, Haiying Wang
Assessing the impact of network depth on the analysis of PPI networks: A case study. 200-207 - Matthew Conforth, Yan Meng, Chandra Valmikinathan, Xiaojun Yu:
Nerve graft selection for peripheral nerve regeneration using neural networks trained by a hybrid ACO/PSO method. 208-214 - Marta Szachniuk
An assignment walk through 3D NMR spectrum. 215-219 - Jirí Novák
An application of the metric access methods to the mass spectrometry data. 220-227 - Jennifer Hallinan, Matthew R. Pocock, Stephen G. Addinall, David A. Lydall, Anil Wipat:
Clustering incorporating shortest paths identifies relevant modules in functional interaction networks. 228-236 - Le Bao, Zhou Zhu, Jingjing Ye:
Modeling oncology gene pathways network with multiple genotypes and phenotypes via a copula method. 237-246 - Peng-Gang Sun, Lin Gao:
Fast algorithms for detecting overlapping functional modules in protein-protein interaction networks. 247-254 - Mariusz Butkiewicz, Ralf Mueller, Danilo Selic, Eric Dawson, Jens Meiler:
Application of machine learning approaches on quantitative structure activity relationships. 255-262 - David Hoksza
DDPIn - Distance and density based protein indexing. 263-270 - Haw-Chang Lan, Tsai-Rong Chang, Wen-Ching Liao, Yi-Nung Chung, Pau-Choo Chung:
Knee MR image segmentation combining contextual constrained neural network and level set evolution. 271-277 - Chuan-Yu Chang, Jeng-Shiun Tsai, Chi-Jane Wang
Emotion recognition with consideration of facial expression and physiological signals. 278-283 - Mutlu Mete, Umit Topaloglu:
Statistical comparison of color model-classifier pairs in hematoxylin and eosin stained histological images. 284-291 - Xuwei Liang, Qi Zhuang, Ning Cao, Jun Zhang:
Shape modeling and clustering of white matter fiber tracts using fourier descriptors. 292-297 - Sungeun Kim, Li Shen
Data synthesis and tool development for exploring imaging genomic patterns. 298-305
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