ggmuller: Create Muller Plots of Evolutionary Dynamics
Create plots that combine a phylogeny and frequency dynamics. Phylogenetic input can be a generic adjacency matrix or a tree of class "phylo". Inspired by similar plots in publications of the labs of RE Lenski and JE Barrick. Named for HJ Muller (who popularised such plots) and H Wickham (whose code this package exploits).
| Version: | 0.5.6 |
| Depends: | R (≥ 3.2.0) |
| Imports: | dplyr (≥ 0.7.0), ggplot2, ape |
| Suggests: | RColorBrewer, knitr, rmarkdown |
| Published: | 2023-02-12 |
| DOI: | 10.32614/CRAN.package.ggmuller |
| Author: | Robert Noble |
| Maintainer: | Robert Noble <robjohnnoble at gmail.com> |
| License: | MIT + file LICENSE |
| NeedsCompilation: | no |
| Materials: | README |
| In views: | Phylogenetics |
| CRAN checks: | ggmuller results |
Documentation:
| Reference manual: | ggmuller.pdf |
| Vignettes: |
Introduction to ggmuller |
Downloads:
| Package source: | ggmuller_0.5.6.tar.gz |
| Windows binaries: | r-devel: ggmuller_0.5.6.zip, r-release: ggmuller_0.5.6.zip, r-oldrel: ggmuller_0.5.6.zip |
| macOS binaries: | r-release (arm64): ggmuller_0.5.6.tgz, r-oldrel (arm64): ggmuller_0.5.6.tgz, r-release (x86_64): ggmuller_0.5.6.tgz, r-oldrel (x86_64): ggmuller_0.5.6.tgz |
| Old sources: | ggmuller archive |
Linking:
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