genekitr: Gene Analysis Toolkit

Provides features for searching, converting, analyzing, plotting, and exporting data effortlessly by inputting feature IDs. Enables easy retrieval of feature information, conversion of ID types, gene enrichment analysis, publication-level figures, group interaction plotting, and result export in one Excel file for seamless sharing and communication.

Version:	1.2.8
Depends:	R (≥ 3.6)
Imports:	clusterProfiler, dplyr, europepmc, fst, geneset, ggplot2, ggraph, ggvenn, igraph, magrittr, openxlsx, stringr, stringi, tidyr, rlang
Suggests:	AnnotationDbi, cowplot, ComplexUpset, forcats, fgsea, futile.logger, ggplotify, ggsci, ggrepel, ggridges, ggnewscale, GOplot, GOSemSim, labeling, pheatmap, tm, treemap, RColorBrewer, RCurl, reshape2, rio, rrvgo, testthat (≥ 3.0.0), wordcloud, knitr, rmarkdown, XML, xml2, httr
Published:	2024-09-06
DOI:	10.32614/CRAN.package.genekitr
Author:	Yunze Liu [aut, cre]
Maintainer:	Yunze Liu <jieandze1314 at gmail.com>
BugReports:	https://github.com/GangLiLab/genekitr/issues
License:	GPL-3
URL:	https://www.genekitr.fun/
NeedsCompilation:	no
Materials:	README ChangeLog
CRAN checks:	genekitr results

Documentation:

Reference manual:

genekitr.pdf

Downloads:

Package source:	genekitr_1.2.8.tar.gz
Windows binaries:	r-devel: genekitr_1.2.8.zip, r-release: genekitr_1.2.8.zip, r-oldrel: genekitr_1.2.8.zip
macOS binaries:	r-release (arm64): genekitr_1.2.8.tgz, r-oldrel (arm64): genekitr_1.2.8.tgz, r-release (x86_64): genekitr_1.2.8.tgz, r-oldrel (x86_64): genekitr_1.2.8.tgz
Old sources:	genekitr archive

Reverse dependencies:

Reverse imports:

MIRit

Linking:

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