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18 pages, 415 KiB  
Review
The Oral Microbiota, Microbial Metabolites, and Immuno-Inflammatory Mechanisms in Cardiovascular Disease
by Zheng Wang, Robert C. Kaplan, Robert D. Burk and Qibin Qi
Int. J. Mol. Sci. 2024, 25(22), 12337; https://doi.org/10.3390/ijms252212337 (registering DOI) - 17 Nov 2024
Abstract
Cardiovascular diseases (CVDs) remain a leading cause of global morbidity and mortality. Recent advancements in high-throughput omics techniques have enhanced our understanding of the human microbiome’s role in the development of CVDs. Although the relationship between the gut microbiome and CVDs has attracted [...] Read more.
Cardiovascular diseases (CVDs) remain a leading cause of global morbidity and mortality. Recent advancements in high-throughput omics techniques have enhanced our understanding of the human microbiome’s role in the development of CVDs. Although the relationship between the gut microbiome and CVDs has attracted considerable research attention and has been rapidly evolving in recent years, the role of the oral microbiome remains less understood, with most prior studies focusing on periodontitis-related pathogens. In this review, we summarized previously reported associations between the oral microbiome and CVD, highlighting known CVD-associated taxa such as Porphyromonas gingivalis, Fusobacterium nucleatum, and Aggregatibacter actinomycetemcomitans. We also discussed the interactions between the oral and gut microbes. The potential mechanisms by which the oral microbiota can influence CVD development include oral and systemic inflammation, immune responses, cytokine release, translocation of oral bacteria into the bloodstream, and the impact of microbial-related products such as microbial metabolites (e.g., short-chain fatty acids [SCFAs], trimethylamine oxide [TMAO], hydrogen sulfide [H2S], nitric oxide [NO]) and specific toxins (e.g., lipopolysaccharide [LPS], leukotoxin [LtxA]). The processes driven by these mechanisms may contribute to atherosclerosis, endothelial dysfunction, and other cardiovascular pathologies. Integrated multi-omics methodologies, along with large-scale longitudinal population studies and intervention studies, will facilitate a deeper understanding of the metabolic and functional roles of the oral microbiome in cardiovascular health. This fundamental knowledge will support the development of targeted interventions and effective therapies to prevent or reduce the progression from cardiovascular risk to clinical CVD events. Full article
(This article belongs to the Special Issue Microbial Omics)
16 pages, 6572 KiB  
Review
Near-Infrared Autofluorescence: Early Detection of Retinal Pigment Epithelial Alterations in Inherited Retinal Dystrophies
by Simone Kellner, Silke Weinitz, Ghazaleh Farmand and Ulrich Kellner
J. Clin. Med. 2024, 13(22), 6886; https://doi.org/10.3390/jcm13226886 (registering DOI) - 15 Nov 2024
Viewed by 213
Abstract
Near-infrared autofluorescence (NIA) is a non-invasive retinal imaging technique used to examine the retinal pigment epithelium (RPE) based on the autofluorescence of melanin. Melanin has several functions within RPE cells. It serves as a protective antioxidative factor and is involved in the phagocytosis [...] Read more.
Near-infrared autofluorescence (NIA) is a non-invasive retinal imaging technique used to examine the retinal pigment epithelium (RPE) based on the autofluorescence of melanin. Melanin has several functions within RPE cells. It serves as a protective antioxidative factor and is involved in the phagocytosis of photoreceptor outer segments. Disorders affecting the photoreceptor–RPE complex result in alterations of RPE cells which are detectable by alterations of NIA. NIA allows us to detect early alterations in various chorioretinal disorders, frequently before they are ophthalmoscopically visible and often prior to alterations in lipofuscin-associated fundus autofluorescence (FAF) or optical coherence tomography (OCT). Although NIA and FAF relate to disorders affecting the RPE, the findings for both imaging methods differ and the area involved has been demonstrated to be larger in NIA compared to FAF in several disorders, especially inherited retinal dystrophies (IRDs), indicating that NIA detects earlier alterations compared to FAF. Foveal alterations can be much more easily detected using NIA compared to FAF. A reduced subfoveal NIA intensity is the earliest sign of autosomal dominant Best disease, when FAF and OCT are still normal. In other IRDs, a preserved subfoveal NIA intensity is associated with good visual acuity. So far, the current knowledge on NIA in IRD has been presented in multiple separate publications but has not been summarized in an overview. This review presents the current knowledge on NIA in IRD and demonstrates NIA biomarkers. Full article
(This article belongs to the Special Issue Advances in Ophthalmic Imaging)
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Figure 1
<p>Normal NIA distribution. (<b>A</b>–<b>C</b>): 30° images. (<b>D</b>–<b>F</b>): 50° images. Corresponding to the distribution of melanin in RPE cells [<a href="#B10-jcm-13-06886" class="html-bibr">10</a>], the highest NIA intensity is located under the fovea, with a decline towards the parafovea and more peripheral homogenous intensity towards the periphery. The area of higher intensity varies between patients. Retinal vessels block NIA and appear dark, similar to the optic disc which contains no melanin. In contrast to FAF, NIA is not blocked by macular pigment and therefore facilitates better detection of foveal lesions. All scale bars indicate 200 µm.</p>
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<p><span class="html-italic">ABCA4</span>-associated IRD. All patients had two pathogenic or likely pathogenic gene sequence variants in the <span class="html-italic">ABCA4</span> gene. (<b>A</b>–<b>C</b>): A 16-year-old male. Visual acuity 20/200 on the right eye, 20/400 on the left eye, and central scotomas. Severe loss of NIA and FAF intensity at the posterior pole with a small area of preserved subfoveal NIA and FAF. Towards the periphery, the ring of increased NIA intensity is slightly peripheral to the ring of increased FAF intensity (yellow arrow). (<b>D</b>–<b>F</b>): A 37-year-old male: visual acuity 20/200 on both eyes and central scotomas. Fleck-like areas of abnormal intensity are more extensive in NIA compared to FAF. A parapapillary fleck can be detected with NIA, but not with FAF or fundus photography (yellow arrows). (<b>G</b>–<b>I</b>): A 15-year-old patient with CRD. Visual acuity 20/200 on both eyes and central scotomas. Multiple fleck-like lesions in NIA and FAF, more reduced intensity in NIA compared to FAF. The area of preserved peripapillary RPE is smaller in NIA compared to FAF. All scale bars indicate 200 µm.</p>
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<p><span class="html-italic">BEST1</span>-associated macular dystrophy in subclinical stages. All patients had one pathogenic gene sequence variant in the <span class="html-italic">BEST1</span> gene (<b>A</b>–<b>C</b>): A 3-year-old female. Visual acuity 20/20; visual fields not tested due to age. Reduced subfoveal NIA intensity and normal FAF and OCT. (<b>D</b>,<b>E</b>): A 40-year-old female, aunt of the previous patient. Visual acuity 20/20; visual fields normal. Reduced subfoveal NIA intensity and normal FAF; OCT not performed. (<b>F</b>–<b>H</b>): A 44-year-old female from a different family. Visual acuity 20/20; visual fields normal. Reduced subfoveal NIA intensity and slightly increased parafoveal FAF intensity; normal OCT. All scale bars indicate 200 µm.</p>
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<p>Cone-rod dystrophy. (<b>A</b>–<b>C</b>): A 43-year-old male. <span class="html-italic">RPGR</span>-associated CRD; one pathogenic gene sequence variant in the <span class="html-italic">RPGR</span> gene. Visual acuity 20/40 in the right eye and 20/25 in the left eye; paracentral scotomas. Central lesion with rings of increased NIA and FAF intensity, the ring is slightly larger in NIA. (<b>D</b>–<b>F</b>): 54-year-old male, <span class="html-italic">PRPH2</span> associated CRD, one pathogenic gene sequence variant in the <span class="html-italic">PRPH2</span> gene. Visual acuity 20/400 on the right eye, 20/40 on the left eye, central scotoma on the right eye, paracentral scotoma on the left eye. Reduced subfoveal NIA intensity is more extensive compared to FAF. Lesions with increased FAF intensity are predominantly located in larger areas with reduced NIA intensity. All scale bars indicate 200 µm.</p>
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<p>Retinitis pigmentosa. (<b>A</b>–<b>C</b>): A 35-year-old female. <span class="html-italic">PRPF6</span>-associated autosomal dominant RP; one likely pathogenic gene sequence variant in the <span class="html-italic">PRPF6</span> gene. Visual acuity 20/20; concentric constriction of visual field. Pericentral ring of increased NIA and FAF intensity and marked adjacent peripheral reduction in NIA, but not FAF intensity. The same vessel is indicated by yellow arrows in NIA, FAF, and OCT. The ring of increased intensity is slightly smaller in NIA. The ring in NIA corresponds to the end of the EZ line on OCT. (<b>D</b>–<b>F</b>): A 54-year-old female. <span class="html-italic">NPHP1</span>-associated autosomal recessive syndromic RP; one homozygous <span class="html-italic">NPHP1</span> gene sequence variant. Visual acuity in one the right eye in response to hand movement; in the left eye, 20/400 ring scotomas. Mid-peripheral ring of increased NIA and FAF intensity; the ring is slightly more peripheral compared to FAF (yellow arrows). The central area of preserved NIA intensity is smaller compared to the preserved FAF intensity (green arrows). All scale bars indicate 200 µm.</p>
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<p>Choroideremia. Both patients had one pathogenic gene sequence variant in the <span class="html-italic">CHM</span> gene. (<b>A</b>–<b>C</b>): A 56-year-old male. Visual acuity 20/25 in both eyes; severely constricted visual fields. The area of preserved NIA intensity is smaller than the area of preserved FAF intensity and the preserved ellipsoid zone in OCT. (<b>D</b>–<b>F</b>): A 23-year-old male. Visual acuity 20/20 in both eyes; severely constricted visual fields. The area of preserved NIA intensity is smaller than the area of preserved normal FAF intensity, much smaller than the area of mottled FAF intensity, and smaller than the preserved ellipsoid zone in OCT. NIA from choroidal melanin is detectable between large choroidal vessels. All scale bars indicate 200 µm.</p>
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23 pages, 2055 KiB  
Article
Automating the Derivation of Sugarcane Growth Stages from Earth Observation Time Series
by Neha Joshi, Daniel M. Simms and Paul J. Burgess
Remote Sens. 2024, 16(22), 4244; https://doi.org/10.3390/rs16224244 - 14 Nov 2024
Viewed by 456
Abstract
Sugarcane is a high-impact crop used in the majority of global sugar production, with India being the second largest global producer. Understanding the timing and length of sugarcane growth stages is critical to improving the sustainability of sugarcane management. Earth observation (EO) data [...] Read more.
Sugarcane is a high-impact crop used in the majority of global sugar production, with India being the second largest global producer. Understanding the timing and length of sugarcane growth stages is critical to improving the sustainability of sugarcane management. Earth observation (EO) data have been shown to be sensitive to the variation in sugarcane growth, but questions remain as to how to reliably extract sugarcane phenology over wide areas so that this information can be used for effective management. This study develops an automated approach to derive sugarcane growth stages using EO data from Landsat-8 and Sentinel-2 satellite data in the Indian state of Andhra Pradesh. The developed method is then evaluated in the State of Telangana. Normalised difference vegetation index (NDVI) EO data from Landsat-8 and Sentinel-2 were pre-processed to filter out clouds and to harmonise sensor response. Pixel-based cloud filtering was selected over filtering by scene in order to increase the temporal frequency of observations. Harmonising data from two different sensors further increased temporal resolution to 3–6 days (70% of sampled fields). To automate seasonal decomposition, harmonised signals were resampled at 14 days, and low-frequency components, related to seasonal growth, were extracted using a fast Fourier transform. The start and end of each season were extracted from the time series using difference of Gaussian and were compared to assessments based on visual observation for both Unit 1 (R2 = 0.72–0.84) and Unit 2 (R2 = 0.78–0.82). A trapezoidal growth model was then used to derive crop growth stages from satellite-measured phenology for better crop management information. Automated assessments of the start and the end of mid-season growth stages were compared to visual observations in Unit 1 (R2 = 0.56–0.72) and Unit 2 (R2 = 0.36–0.79). Outliers were found to result from cloud cover that was not removed by the initial screening as well as multiple crops or harvesting dates within a single field. These results demonstrate that EO time series can be used to automatically determine the growth stages of sugarcane in India over large areas, without the need for prior knowledge of planting and harvest dates, as a tool for improving sustainable production. Full article
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Figure 1
<p>Sugarcane fields associated with processing Units 1 and 2 located in southern India. Sugarcane area Unit 1 is situated in (<b>a</b>) Andhra Pradesh, and (<b>b</b>) Unit 2 is in Telangana.</p>
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<p>A schematic diagram depicting the four stages of sugarcane growth in India based on the FAO model for sugarcane evapotranspiration [<a href="#B31-remotesensing-16-04244" class="html-bibr">31</a>].</p>
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<p>The methodology was established using data from Unit 1 and then evaluated using data from Unit 2.</p>
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<p>Before cloud filtering, cloud cover caused many low values of the Normalised Difference Vegetation Index (NDVI) (grey lines) from the Sentinel-2 (left in (<b>a</b>)) and Landsat-8 (right in (<b>b</b>)) data for sugarcane fields from September 2017 to October 2019. Using Method 1 to filter the clouds removed many of the low NDVI values (red lines), but more low values were removed using Method 2 (blue lines).</p>
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<p>A frequency diagram presenting the average number of cloud-free observations received by each field, from three datasets, in one year (1 January 2018–1 January 2019). The number of observations received by the Landsat-8 (L8 TOA) dataset is presented by the green line, and the number of observations received by the Sentinel-2 dataset (S2 TOA) is presented by the orange line. The purple line represents the harmonised (L8/S2 TOA) dataset, which is the Landsat-8 and Sentinel-2 dataset combined.</p>
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<p>Correlation between the Landsat-8 (L8 TOA) NDVI observations and the Sentinel-2 (S2 TOA) observations for Unit 1. The solid black line shows ordinary least-squares (OLS) regression of the Landsat-8 data against the Sentinel-2 data. Only NDVI values in the range of 0.0 to 1.0 are illustrated. The hashed red line shows a reference 1:1 line, and the colour bar represents the density of observations.</p>
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<p>An illustration of how field reference data of sugarcane growth stages were manually interpreted using an example sugarcane field in Unit 1 for the 2018 season. The cloud-filtered NDVI time series data for the example field are displayed in grey, with Sentinel-2 observations marked in red and Landsat-8 observations marked in blue. An idealized trapezoid profile for the field marked with hashed black lines superimposed on top of the NDVI time series profile helped with the manual interpretations of growth stages. The start of the season was manually interpreted as the first point of the sugarcane growing season detected from EO imagery, and the end of the season was interpreted as the last low observation after the end of the mid-season before a rapid increase in NDVI (marking the start of a new growth cycle).</p>
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<p>The effect of changing the best index slope extraction (BISE) sliding period on the number of additional erroneous troughs removed per field per growth cycle (left-hand scale) and the root mean square error (RMSE) (right-hand scale) in the calculation of the start and end of the sugarcane growth cycle.</p>
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<p>Time series NDVI decomposed into individual seasons using the low-frequency components of a fast Fourier transform for a sugarcane field with four ratoons.</p>
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<p>A schematic diagram illustrating how the start of the mid-season (SMS) and the end of the mid-season (EMS) were derived.</p>
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<p>Unit 1 sugarcane fields used for algorithm development showing the relationship between automated and manually derived (<b>left</b>) start of the season and (<b>right</b>) end of season, using 14-day resampled time series, where day is the number of days after 1 September 2017. Equations show the linear relationship before the removal of outliers.</p>
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<p>Unit 2 sugarcane fields used for validation showing the relationship between the automated and manually derived (<b>left</b>) start of the season and (<b>right</b>) end of season using 14-day resampled time series, where day is the number of days after 1 September 2017. Results are not affected by field size. Equations show the linear relationship before the removal of outliers.</p>
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<p>Sugarcane fields from Unit 1 used for calibration, showing the relationship between automated and manually derived (<b>left</b>) start of mid-season and (<b>right</b>) end of mid-season, using 14-day resampled time series, where day is the number of days after 1 September 2017. The equations show the linear relationship after the removal of outliers.</p>
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<p>Sugarcane fields from Unit 2 used for validation, showing the relationship between automated and manually derived (<b>left</b>) start of mid-season and (<b>right</b>) end of mid-season, using 14-day resampled time series, where day is the number of days after 1 September 2018. The equations show the linear relationship after the removal of outliers.</p>
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18 pages, 2224 KiB  
Article
Guided Decision Tree: A Tool to Interactively Create Decision Trees Through Visualization of Subsequent LDA Diagrams
by Miguel A. Mohedano-Munoz, Laura Raya and Alberto Sanchez
Appl. Sci. 2024, 14(22), 10497; https://doi.org/10.3390/app142210497 - 14 Nov 2024
Viewed by 346
Abstract
Decision trees are a widely used machine learning technique due to their ease of interpretation and construction. This method allows domain experts to learn from raw data, but they cannot include their prior knowledge in the analysis due to its automatic nature, which [...] Read more.
Decision trees are a widely used machine learning technique due to their ease of interpretation and construction. This method allows domain experts to learn from raw data, but they cannot include their prior knowledge in the analysis due to its automatic nature, which implies minimal human intervention in its computation. Conversely, interactive visualization methods have proven to be effective in gaining insights from data, as they incorporate the researcher’s criteria into the analysis process. In an effort to combine both methodologies, we have developed a tool to manually build decision trees according to subsequent visualizations of data mapping after applying linear discriminant analysis in combination with Star Coordinates in order to analyze the importance of each feature in the separation. The nodes’ information contains data about the features that can be used to split and their cut-off values, in order to select them in a guided manner. In this way, it is possible to produce simpler and more expertly driven decision trees than those obtained by automatic methods. The resulting decision trees reduces the tree size compared to those generated by automatic machine learning algorithms, obtaining a similar accuracy and therefore improving their understanding. The tool developed and presented here to manually create decision trees in a guided manner based on the subsequent visualizations of the data mapping facilitates the use of this method in real-world applications. The usefulness of this tool is demonstrated through a case study with a complex dataset used for motion recognition, where domain experts built their own decision trees by applying their prior knowledge and the visualizations provided by the tool in node construction. The resulting trees are more comprehensible and explainable, offering valuable insights into the data and confirming the relevance of upper body features and hand movements for motion recognition. Full article
(This article belongs to the Special Issue AI Applied to Data Visualization)
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Figure 1
<p>Use of Star Coordinates to represent records. The first case shows how to apply it when all the features have the same weight and arbitrary orientation. The second case shows the application after use of the transformation matrix obtained from the LDA algorithm to define the feature weight and orientation in the mapping.</p>
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<p>Schematic of user interaction for node building. The method proposes applying LDA in every target node subset, represent it on Star Coordinates, and decide the partitioning feature from that visualization.</p>
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<p>Software architecture diagram. GDT presents a client–server architecture, based on Python libraries. Plotly Dash manages the presentation and service layers. The logic layer includes the scikit-learn and pandas libraries and the modification of entropy algorithms.</p>
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<p>GUI. The work space is divided into three areas: (1) management of the user interaction in the data upload, feature selection, and the manual tree creation; (2) interactive tree and LDA mapping viewer; (3) automatic decision trees and comparing performance settings.</p>
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<p>Data interaction. From these menus, the user can (<b>a</b>) prepare the data for the analysis and build the train and test sets; and (<b>b</b>) create nodes and extract information from the partition in the node. In (<b>a</b>), analysts can define the separator used in the data file and the feature class for supervised learning and select features for the analysis and the percentage of the training–testing set. In (<b>b</b>), they can define the parameters for the node construction and deletion and define it as a leaf node.</p>
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<p>Users can extract knowledge about how the subset is split in every step of the classification. In this case, we show the steps to creating a tree in the Iris dataset [<a href="#B33-applsci-14-10497" class="html-bibr">33</a>]. Each node is represented as a pie chart with colors indicating the different categories, and the size representing their rate. If the node is defined as a leaf node, the outline stoke is colored in green. If the last node on a branch has not been defined as a leaf node, its outline stoke is colored in red.</p>
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<p>Support decision visualization based on LDA and Star Coordinates for the Iris dataset [<a href="#B33-applsci-14-10497" class="html-bibr">33</a>].</p>
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<p>GDT allows the users to choose the representation for decision support in two classes of nodes. (<b>a</b>) SC representation of LDA after applying a jittering based on PCA in the same node. (<b>b</b>) Coordinated view of 1D LDA projection, distribution plot of samples, and values of features in linear transformation matrix. In this instance, the focus is on how it distinguishes between the versicolor (2, green) and virginica (3, red) classes within the iris dataset.</p>
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<p>Performance obtained by the automatic and manually built trees in the Iris dataset [<a href="#B33-applsci-14-10497" class="html-bibr">33</a>]. Each class consists of 50 balanced records before training and testing sets with a 70:30 ratio.</p>
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<p>Example of exported trees both manually obtained and automatically generated by means of scikit-learn from the Iris dataset [<a href="#B33-applsci-14-10497" class="html-bibr">33</a>]. The similar format allows domain experts to make a comparison at first sight. (<b>a</b>) Guided interactively built tree and (<b>b</b>) scikit-learn tree.</p>
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<p>Representation of the variables in the original dataset (<b>a</b>) and in the two scenarios used for decision tree construction (<b>b</b>). The set of variables has been reduced based on feature importance metrics.</p>
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<p>Resulting decision trees. (<b>a</b>) Decision tree built by domain experts by using GDT. (<b>b</b>) Decision tree built by using scikit-learn. The manually built tree (<b>a</b>) is simpler and easier to follow than the tree created by the algorithm (<b>b</b>).</p>
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<p>Performance comparison between the tree built by scikit-learn and manually, with six classes in the dataset. Each class starts balanced, with 1024 samples, and training and testing sets are created with a 70:30 ratio. The results of the manual tree are similar to those obtained with the automatic algorithm, but with a simpler tree built by a process that allows domain experts to participate in the process.</p>
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<p>Detail from the decision tree built by the domain experts. Highlighted in a red box are the first two steps where leaf nodes (pink and green) are defined for more than 27% of the total samples.</p>
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<p>Resulting decision trees for the whole dataset with 14 classes. (<b>a</b>) Guided Decision tree. (<b>b</b>) Scikit-learn decision tree.</p>
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<p>Performance comparison between the tree built by scikit-learn and manually, with 14 classes in the dataset. Each class starts balanced, with 885 samples, and training and testing sets are created with a 70:30 ratio. The results of the manual tree are slightly worse in this case, but the result is a simpler decision tree wherein the domain experts could apply their knowledge.</p>
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<p>Zoomedin view of <a href="#applsci-14-10497-f015" class="html-fig">Figure 15</a>a, focusing on the early stages, where it can be seen, for instance in the nodes highlighted with the red boxes, that the variable ‘R_Hip_1’ is a decisive node.</p>
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12 pages, 776 KiB  
Article
Awareness and Perception of Hepatitis C Self-Testing in Nigeria: A National Survey of Stakeholders and the Public
by Victor Abiola Adepoju, Donald Chinazor Udah, Chinonye Alioha Ezenwa, Jamiu Ganiyu and Qorinah Estiningtyas Sakilah Adnani
Venereology 2024, 3(4), 199-210; https://doi.org/10.3390/venereology3040016 - 14 Nov 2024
Viewed by 298
Abstract
Background: Hepatitis C virus (HCV) infection presents a significant public health challenge globally, particularly in high-burden countries like Nigeria, where an estimated 2.4 million individuals are living with HCV. HCV self-testing (HCVST) can potentially bridge the significant diagnosis gap and help individuals to [...] Read more.
Background: Hepatitis C virus (HCV) infection presents a significant public health challenge globally, particularly in high-burden countries like Nigeria, where an estimated 2.4 million individuals are living with HCV. HCV self-testing (HCVST) can potentially bridge the significant diagnosis gap and help individuals to determine their HCV status in the privacy of their homes. It offers a solution to overcome barriers related to stigma and limited access to healthcare. In Nigeria, Self-testing for hepatitis C has only been implemented in a pilot research context. This study aimed to assess stakeholder and community awareness and perceptions of HCVST in Nigeria. The findings will provide insights that could inform effective policies and future scale-up programs for HCV control. Methods: A cross-sectional descriptive study was conducted using an online social media survey administered through SurveyMonkey. The survey was disseminated across social media platforms and groups between October–November 2023. Participants included Nigerians (both health professionals and non-health professionals) aged 18 years or older residing in any of the 36 states and the Federal Capital Territory (FCT). Data collected include sociodemographic characteristics, awareness and perceptions of HCVST, and perceived benefits and barriers. Results: Of 321 respondents, 94% perceived HCVST as highly important. While 77% of respondents knew about HIVST, only 58% had prior knowledge of HCVST. The analysis also showed that healthcare workers had greater awareness of HIV self-testing (82.3%) compared to non-healthcare workers (50.0%). Most respondents (88%) were highly likely to recommend HCVST and perceived it as a cost-effective alternative to traditional testing. Key perceived benefits included increased disease detection and control (67%), improved access to testing (21%), and reduced stigma (11%). In the unadjusted model, geographical zone (Southern Nigeria: cOR = 0.49, 95% CI: 0.30–0.77, p = 0.002), work experience (more than 20 years: cOR = 2.79, 95% CI: 1.11–8.07, p = 0.039), and prior awareness of HIV self-testing (cOR = 5.24, 95% CI: 3.00–9.43, p < 0.001) were significant predictors of HCVST awareness. However, in the adjusted model, only prior awareness of HIV self-testing remained significant (aOR = 4.77, 95% CI: 2.62–8.94, p < 0.001). Conclusions: The strong support for HCVST among stakeholders in Nigeria highlights its potential to enhance HCV control, especially within the broader context of infectious diseases like STIs. The greater awareness of HIV self-testing among healthcare workers compared to non-healthcare workers indicates the need for targeted awareness campaigns for non-healthcare populations. Addressing these awareness gaps, leveraging lessons from HIVST, and using existing infrastructure will be crucial. Prioritizing public education, outreach, and effective linkage to care will drive the impact of HCVST in achieving HCV elimination goals and position it as a model for expanding similar STI interventions in Nigeria. Full article
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<p>Distribution of health sector experience across professional roles.</p>
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<p>Respondents’ professional healthcare experience with previous self-testing and HIV knowledge.</p>
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13 pages, 520 KiB  
Article
The Influence of Pre-Competitive Anxiety and Self-Confidence on Dancesport Performance
by Sara Aliberti, Gaetano Raiola, Francesca D’Elia and Domenico Cherubini
Sports 2024, 12(11), 308; https://doi.org/10.3390/sports12110308 - 13 Nov 2024
Viewed by 327
Abstract
Competitive dancesport (DS) performance is a multifactorial phenomenon influenced by physical and mental factors. The emotions experienced by athletes in competition are strongly linked to their sports performance. However, to our knowledge, no studies have investigated the direct relationship between performance and emotional [...] Read more.
Competitive dancesport (DS) performance is a multifactorial phenomenon influenced by physical and mental factors. The emotions experienced by athletes in competition are strongly linked to their sports performance. However, to our knowledge, no studies have investigated the direct relationship between performance and emotional states in DS. Consequently, the aims were four: (I) to investigate the influence of anxiety and self-confidence on DS performance; (II) to examine the influence of years of experience, prior victories, and perceived preparedness on performance outcomes; (III) to identify the optimal emotional state levels for peak performance; (IV) to investigate differences between different athletes’ levels and class. The participants were 71 Italian DS athletes divided into three groups (22 B-class, 25 C-class, 24 D-class). Before competition, they supplied demographic information about their gender, years of experience, perceived preparedness, previous winnings in the current class, followed by the completion of the Italian version of Revised Competitive State Anxiety Inventory–2 (CSAI-2R). To assess the athletes’ performance, the final classification of the competition was taken into consideration. The results showed that both overall and relative variables from the CSAI-2R significantly predicted performance outcomes (p < 0.05), although somatic anxiety did so to a lesser extent. Significant differences emerged between athletes of different classes in terms of years of experience (p = 0.000), perceived preparedness (p = 0.000), cognitive anxiety (p = 0.000) and self-confidence (p = 0.000). The optimal levels for good performance were cognitive anxiety (11.61 ± 2.27), somatic anxiety (15.77 ± 1.72) and self-confidence (15.12 ± 2.56). The findings of this study provide valuable insights into the multifactorial nature of competitive DS performance, particularly highlighting the significant role of emotional states such as anxiety and self-confidence, as well as other variables such as class, level, years of experience and perceived preparedness. Full article
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<p>Best levels in HL athletes.</p>
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<p>Worst level in LP athletes.</p>
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19 pages, 1643 KiB  
Article
Technological Interface Components That Support Accelerated Learning in the Acquisition of Foreign Language Vocabulary
by David Passig, Ganit Eshel Kedmi and Adi Aharoni
Appl. Sci. 2024, 14(22), 10436; https://doi.org/10.3390/app142210436 - 13 Nov 2024
Viewed by 389
Abstract
There is a need to find innovative learning methods that enable accelerated learning of a foreign language. This study examined the effect of computer-assisted language learning (CALL) in acquiring a foreign language, which combines cognitive and emotional stimuli in the background. The study [...] Read more.
There is a need to find innovative learning methods that enable accelerated learning of a foreign language. This study examined the effect of computer-assisted language learning (CALL) in acquiring a foreign language, which combines cognitive and emotional stimuli in the background. The study explored two factors related to the acquisition of a foreign language: the duration and scope of the learning process and the depth of internalization of the newly acquired language. Another objective was to assess the learning method in two learning environments, 2D and VR, to determine if the learning environment affects the learning results and leads to better vocabulary retention. One hundred native French speakers, with an average age of 47.5, participated in the study and had no prior knowledge of the newly acquired language. We randomly divided the participants into two groups (2D and VR). They studied 550 words in a new language for five days: 30 min each evening and 15 min in the morning. The post-learning test pointed out that both groups improved their vocabulary scores significantly. Approximately one month after the learning experience, we administered a knowledge retention test to 32 participants and found that the level of knowledge had been retained. Finally, background variables (e.g., gender, age, and previous knowledge of the newly acquired language) did not affect the learning results. The findings indicate that CALL, which integrates background cognitive and emotional stimuli in both learning environments, significantly accelerates learning pace, broadens the scope of newly acquired words, and ensures retention. The level of improvement observed in our study is notably higher than that reported in the literature for studies that had previously evaluated CALL and in-class language acquisition. Full article
(This article belongs to the Special Issue Virtual and Augmented Reality: Theory, Methods, and Applications)
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<p>The boxplots of ages for the VRH group and 2D group.</p>
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<p>Illustration of the breathing cycles.</p>
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<p>A visual representation of the vocabulary ‘I want to drink’.</p>
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<p>VR headset and smartphone inserted into the headset.</p>
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<p>Differences in outcome variables following the learning sessions (the error bars represent the std error).</p>
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23 pages, 12334 KiB  
Article
Cross-Cultural Biology Teaching Using Next-Generation Science Standards
by Jason Jimenez and Denis Dyvee Errabo
Educ. Sci. 2024, 14(11), 1243; https://doi.org/10.3390/educsci14111243 - 13 Nov 2024
Viewed by 360
Abstract
This study explored Next Generation Science Standards (NGSS) in cross-cultural biology teaching through collaborative lesson studies involving educators from the USA and the Philippines. We employed grounded theory and examined iterative feedback processes during lesson development to refine learning exemplars. Learning exemplars validation [...] Read more.
This study explored Next Generation Science Standards (NGSS) in cross-cultural biology teaching through collaborative lesson studies involving educators from the USA and the Philippines. We employed grounded theory and examined iterative feedback processes during lesson development to refine learning exemplars. Learning exemplars validation affirmed their alignment with both NGSS and the Philippine science education frameworks, ensuring cultural relevance and educational rigor. Five key themes were identified as pivotal: retrieval of prior knowledge, fostering meaningful learning experiences, enhancing memory and retention, fostering active engagement, and cultivating critical thinking skills—integral for developing culturally responsive curricula. Moreover, students became independent learners, responsible for their learning, reflective and critical thinkers, problem solvers, inquiry-oriented, creative, collaborative communicators, modelers, data analysts, persistent, adaptable, and self-directed. Implications include enhancing educational policies to support cultural diversity and integrating cross-cultural learning exemplars to enhance global teaching practices. This study underscored the transformative potential of cross-cultural collaboration in advancing science education, fostering engaging learning environments, and preparing students for global citizenship. Full article
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<p>The profile of each educator.</p>
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<p>The group photo of educators.</p>
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<p>Research materials used for each strategy.</p>
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<p>Phases of the study.</p>
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<p>Educators discussed the importance of probing questions.</p>
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<p>Students shared their solved “Genesaw puzzle: Codominance”.</p>
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<p>Educators emphasized the significance of linking the past and new knowledge.</p>
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<p>Students shared insights.</p>
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<p>Educators talked about teacher-centered or learner-centered interactions.</p>
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<p>Student hypothesized using his syntactic ability.</p>
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<p>Educators discussed the relevance of learning experiences.</p>
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<p>Sample student-made mind map.</p>
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<p>Teachers conversed about the importance of a learner-centered approach.</p>
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<p>Students built on each other’s ideas.</p>
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<p>Educators emphasized the importance of prior experiences in enhancing retention.</p>
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<p>Students explained their insights.</p>
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<p>Educators considered chunking in stimulating learners’ engagement.</p>
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<p>Students engaged in scientific arguments.</p>
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<p>Educators discussed the required knowledge and skills of the students.</p>
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<p>Students presented their solved puzzle.</p>
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<p>Educators acknowledged the essence of upskilling the learning experiences.</p>
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<p>Students constructed explanations.</p>
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<p>Educators shared insights about students’ asking questions.</p>
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<p>Students communicated their mind map.</p>
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10 pages, 1469 KiB  
Article
The Effects of COVID-19 on Antifungal Prescribing in the UK—Lessons to Learn
by Katharine Pates, Zhendan Shang, Rebeka Jabbar, Darius Armstrong-James, Silke Schelenz, Jimstan Periselneris, Rossella Arcucci and Anand Shah
J. Fungi 2024, 10(11), 787; https://doi.org/10.3390/jof10110787 - 13 Nov 2024
Viewed by 363
Abstract
Fungal infections are increasingly prevalent; however, antifungal stewardship attracts little funding or attention. Previous studies have shown that knowledge of guidelines and scientific evidence regarding antifungals is poor, leading to prescribing based on personal experiences and the inherent biases this entails. We carried [...] Read more.
Fungal infections are increasingly prevalent; however, antifungal stewardship attracts little funding or attention. Previous studies have shown that knowledge of guidelines and scientific evidence regarding antifungals is poor, leading to prescribing based on personal experiences and the inherent biases this entails. We carried out a retrospective study of inpatient antifungal usage at two major hospitals. We assessed the longitudinal trends in antifungal usage and the effect of COVID-19 on antifungal prescription, alongside levels of empirical and diagnostically targeted antifungal usage. Our results showed that the longitudinal patterns of total systemic antifungal usage within the trusts were similar to national prescribing trends; however, the composition of antifungals varied considerably, even when looking exclusively at the more homogenous group of COVID-19 patients. We showed a high level of empirical antifungal use in COVID-19 patients, with neither trust adhering to international recommendations and instead appearing to follow prior prescribing habits. This study highlights the significant challenges to optimise antifungal use with prescribing behaviour largely dictated by habit, a lack of adherence to guidelines, and high rates of empirical non-diagnostic-based prescribing. Further research and resources are required to understand the impact of antifungal stewardship on improving antifungal prescribing behaviours in this setting and the effects on outcome. Full article
(This article belongs to the Special Issue Progress and Challenges in Antimicrobial Resistance)
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<p>(<b>A</b>) Total systemic antifungal usage at KCH between January 2015 and December 2021. (<b>B</b>) Total systemic antifungal usage at RBH between January 2015 and December 2021.</p>
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<p>(<b>A</b>) Total systemic antifungal usage in the intensive care unit at KCH between January 2015 and December 2021. (<b>B</b>) Total systemic antifungal usage in the intensive care unit at RBH between January 2015 and December 2021.</p>
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<p>(<b>A</b>) Antifungal usage in patients with confirmed or suspected COVID-19 at KCH. (<b>B</b>) Antifungal usage in patients with confirmed or suspected COVID-19 at RBH.</p>
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<p>Number of azole-resistant <span class="html-italic">Aspergillus</span> species identified at RBH between 2015 and 2021.</p>
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11 pages, 222 KiB  
Article
Dietary Habits, Nutritional Knowledge, and Their Impact on Thyroid Health in Women: A Cross-Sectional Study
by Przemysław Gwizdak, Patryk Szlacheta, Daria Łaskawiec-Żuławińska, Mateusz Grajek, Karolina Krupa-Kotara, Jarosław Markowski and Ilona Korzonek-Szlacheta
Nutrients 2024, 16(22), 3862; https://doi.org/10.3390/nu16223862 - 12 Nov 2024
Viewed by 534
Abstract
Background: The thyroid gland plays a crucial role in regulating metabolism and various bodily functions through hormone production. Women are particularly susceptible to thyroid disorders such as hypothyroidism and Hashimoto’s disease, with associated symptoms affecting overall well-being. Prior research has inadequately addressed the [...] Read more.
Background: The thyroid gland plays a crucial role in regulating metabolism and various bodily functions through hormone production. Women are particularly susceptible to thyroid disorders such as hypothyroidism and Hashimoto’s disease, with associated symptoms affecting overall well-being. Prior research has inadequately addressed the influence of dietary habits and nutritional knowledge on thyroid health, especially in women. Objective: This study aimed to evaluate the dietary habits and nutritional awareness of women aged 18–45 with diagnosed thyroid disorders, emphasizing the effects of education level on knowledge and dietary practices. Material and Methods: A cross-sectional survey was conducted with 297 women diagnosed with thyroid conditions. The survey assessed demographics, comorbidities, hydration habits, and knowledge about nutrient intake critical for thyroid health. Chi-square tests, ANOVA, and correlation analyses were performed to evaluate associations. Results: Hypothyroidism and Hashimoto’s disease were most prevalent among younger women (18–25 years). A significant association was observed between higher education and knowledge of protein and carbohydrate roles in managing thyroid health (p < 0.01). Women with higher educational backgrounds more frequently used healthier cooking methods and were more informed about beneficial nutrients, including vitamin D and omega-3. A chi-square test indicated that low water intake was significantly associated with comorbid conditions, including insulin resistance and cardiovascular disease (p < 0.01). Conclusions: Significant gaps remain in dietary knowledge, particularly concerning protein intake and nutrient–drug interactions, indicating a need for targeted dietary education. Women with higher education demonstrated greater dietary awareness, emphasizing the importance of tailored educational interventions to enhance thyroid disorder management. Full article
(This article belongs to the Special Issue Diet and Nutrition: Metabolic Diseases)
19 pages, 5032 KiB  
Article
Heuristic Optimal Scheduling for Road Traffic Incident Detection Under Computational Constraints
by Hao Wu, Jiahao Yang, Ming-Dong Yuan and Xin Li
Sensors 2024, 24(22), 7221; https://doi.org/10.3390/s24227221 - 12 Nov 2024
Viewed by 316
Abstract
The intelligent monitoring of road surveillance videos is a crucial tool for detecting and predicting traffic anomalies, swiftly identifying road safety risks, rapidly addressing potential hazards, and preventing accidents or secondary incidents. With the vast number of surveillance cameras in operation, conducting traditional [...] Read more.
The intelligent monitoring of road surveillance videos is a crucial tool for detecting and predicting traffic anomalies, swiftly identifying road safety risks, rapidly addressing potential hazards, and preventing accidents or secondary incidents. With the vast number of surveillance cameras in operation, conducting traditional real-time video analysis across all cameras at once requires substantial computational resources. Alternatively, methods that employ periodic camera patrol analysis frequently overlook a significant number of anomalous traffic events, thereby hindering the effectiveness of traffic event detection. To overcome these challenges, this paper introduces a heuristic optimal scheduling approach designed to enhance traffic event detection efficiency while operating within limited computational resources. This method leverages historical data and prior knowledge to compute a weighted event feature value for each camera, providing a quantitative measure of its detection efficiency. To optimize resource allocation, a cyclic elimination mechanism is implemented to exclude low-performing cameras, enabling the dynamic reallocation of resources to higher-performing cameras, thereby enhancing overall detection performance. Finally, the effectiveness of the proposed method is validated through a case study conducted in a representative region of a major metropolitan city in China. The results revealed a substantial improvement in traffic event detection efficiency, with increases of 40%, 28%, 17%, and 28% across different time periods when compared to the pre-optimized state. Furthermore, the proposed method outperformed existing resource scheduling algorithms in terms of average load degree, load balance degree, and higher computational resource utilization. By avoiding the common issues of resource wastage and insufficiency often found in static allocation models, this approach offers greater flexibility and adaptability in computational resource scheduling, thereby effectively addressing the practical demands of traffic anomaly detection and early warning systems. Full article
(This article belongs to the Section Internet of Things)
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<p>Schematic diagram of the traffic anomaly event detection efficiency optimization model workflow.</p>
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<p>Spatial distribution characteristics of the 150 cameras in the initial state.</p>
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<p>The values of the overall efficiency of traffic incident detection with iterations.</p>
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<p>Number of algorithm types deployed on cameras in each time window.</p>
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<p>Comparison of the number of detected incidents by type before and after optimization across different time windows.</p>
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<p>Spatial distribution characteristics of 175 intelligent detection cameras after optimization for the time window 00:00–06:00.</p>
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<p>Spatial distribution characteristics of 165 intelligent detection cameras after optimization for the time window 06:00–12:00.</p>
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<p>Spatial distribution characteristics of 162 intelligent detection cameras after optimization for the time window 12:00–18:00.</p>
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<p>Spatial distribution characteristics of 168 intelligent detection cameras after optimization for the time window 18:00–24:00.</p>
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15 pages, 2916 KiB  
Article
Expression of Network Medicine-Predicted Genes in Human Macrophages Infected with Leishmania major
by Felipe Caixeta, Vinicius Dantas Martins, Amanda Braga Figueiredo, Luis Carlos Crocco Afonso, Paolo Tieri, Filippo Castiglione, Leandro Martins de Freitas and Tatiani Uceli Maioli
Int. J. Mol. Sci. 2024, 25(22), 12084; https://doi.org/10.3390/ijms252212084 - 11 Nov 2024
Viewed by 400
Abstract
Leishmania spp. commonly infects phagocytic cells of the immune system, particularly macrophages, employing various immune evasion strategies that enable their survival by altering the intracellular environment. In mammals, these parasites establish persistent infections by modulating gene expression in macrophages, thus interfering with immune [...] Read more.
Leishmania spp. commonly infects phagocytic cells of the immune system, particularly macrophages, employing various immune evasion strategies that enable their survival by altering the intracellular environment. In mammals, these parasites establish persistent infections by modulating gene expression in macrophages, thus interfering with immune signaling and response pathways, ultimately creating a favorable environment for the parasite’s survival and reproduction. In this study, our objective was to use data mining and subsequent filtering techniques to identify the genes that play a crucial role in the infection process of Leishmania spp. We aimed to pinpoint genes that have the potential to influence the progression of Leishmania infection. To achieve this, we exploited prior, curated knowledge from major databases and constructed 16 datasets of human molecular information consisting of coding genes and corresponding proteins. We obtained over 400 proteins, identifying approximately 200 genes. The proteins coded by these genes were subsequently used to build a network of protein–protein interactions, which enabled the identification of key players; we named this set Predicted Genes. Then, we selected approximately 10% of Predicted Genes for biological validation. THP-1 cells, a line of human macrophages, were infected with Leishmania major in vitro for the validation process. We observed that L. major has the capacity to impact crucial genes involved in the immune response, resulting in macrophage inactivation and creating a conducive environment for the survival of Leishmania parasites. Full article
(This article belongs to the Special Issue Molecular Biology of Host and Pathogen Interactions: 2nd Edition)
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<p>Enrichment analysis of 287 source genes. (<b>A</b>) Biological process. (<b>B</b>) Network relationship between enriched BP. (<b>C</b>) Cellular component. (<b>D</b>) Network relationship between enriched CC. (<b>E</b>) Molecular function. (<b>F</b>) Network relationship between enriched MF. Enrichment analysis was performed using ShinyGO with a false discovery rate (FDR) cutoff of 0.05. Top pathways were then identified based on FDR and further ranked by fold enrichment. Highly similar pathways sharing over 95% gene overlap were consolidated, with the most statistically significant one representing the group. The plotted network visualizes the interconnectedness of the enriched pathways. Edges connect GO terms (nodes) if they share at least 20% of their genes, with darker nodes marking greater enrichment and the size of the nodes representing the number of genes. Thicker edges indicate a higher degree of gene overlap between connected pathways.</p>
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<p>Human interactomes in response to Leishmaniasis. (<b>A</b>) BioGrid interactome was assembled by importing source genes from PPI data from the BioGrid database, resulting in an interactome with 259 nodes and 1727 edges, demonstrating the high linkage and high number of interactions between the source genes. (<b>B</b>) APID interactome was assembled by importing source gene data from various sources, including PPI databases, expression datasets, and GO annotations. This interactome contains 253 nodes and 418 edges, showing the interactions between the proteins encoded by the source genes. (<b>C</b>) DIAmond interactome to the genes derived from the BioGrid plug-in resulted in an increased number of genes and edges within the network, resulting in 300 nodes and 11,741 edges. (<b>D</b>) DIAmond APID-derived interactome also yielded an augmented number of nodes and edges, identifying 300 nodes and 2929 edges. Red nodes are the most connected, followed by yellow and green.</p>
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<p>THP-1 infected with <span class="html-italic">L. major</span> do not show increased concentrations of inflammatory cytokines genes. (<b>A</b>) Quantification of THP-1 cells infected with <span class="html-italic">L. major</span> in 3 h post-infection and 12 h post-infection. (<b>B</b>) Corresponding to the amastigote forms already inside the parasitophorous vacuole formed in the macrophages in 3 h post-infection and 12 h post-infection, the green dots are <span class="html-italic">L. major</span> amastigotes labeled with CFSE, and blue are macrophages labeled with DAPI. Scale bar = 20 µm. (<b>C</b>) Relative expression of some inflammatory cytokines in control, infected, and IFN-gamma and LPS-stimulated THP-1 cells for 24 h. Significant differences were determined by using Student’s <span class="html-italic">t</span>-test (* <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, *** <span class="html-italic">p</span> &lt; 0.001).</p>
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<p>Relative expression of Predicted Genes in THP-1 cells infected with <span class="html-italic">L. major</span>. (<b>A</b>) Relative expression of 22 most prominent Predicted Genes at 12 h post-infection (hpi) with <span class="html-italic">L major</span> in control and infected THP-1 cells. (<b>B</b>) Relative expression of 22 most prominent Predicted Genes at 24 hpi with <span class="html-italic">L. major</span> in control and infected THP1 cells. (<b>C</b>) Analysis of gene expression at 24 hpi following combined interferon and LPS stimulation confirmed the response of THP-1 cells to the stimulus; statistically significant differences were observed in a subset, including CASP8, IL4R, NCK2, Ripk2, TANK, and TNFRSF10A. Notably, these differences were present only when comparing the combined stimulus group to both the unstimulated control and the infected groups. Specifically, CASP8, IL4R, NCK2, TANK, and TNFRSF10A showed differences compared to the control, while CASP8 and TANK displayed additional unique differences compared to the infected group. Significant differences were determined by using Student’s <span class="html-italic">t</span>-test (* <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01).</p>
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34 pages, 2398 KiB  
Article
Medical and Engineering Applications for Estimation and Prediction of a New Competing Risks Model: A Bayesian Approach
by Hebatalla H. Mohammad, Heba N. Salem, Abeer A. EL-Helbawy and Faten S. Alamri
Symmetry 2024, 16(11), 1502; https://doi.org/10.3390/sym16111502 - 8 Nov 2024
Viewed by 390
Abstract
The Bayesian approach offers a flexible, interpretable and powerful framework for statistical analysis, making it a valuable tool to help in making optimal decisions under uncertainty. It incorporates prior knowledge or beliefs about the parameters, which can lead to more accurate and informative [...] Read more.
The Bayesian approach offers a flexible, interpretable and powerful framework for statistical analysis, making it a valuable tool to help in making optimal decisions under uncertainty. It incorporates prior knowledge or beliefs about the parameters, which can lead to more accurate and informative results. Also, it offers credible intervals as a measure of uncertainty, which are often more interpretable than confidence intervals. Hence, the Bayesian approach is utilized to estimate the parameters, reliability function, hazard rate function and reversed hazard rate function of a new competing risks model. A squared error loss function as a symmetric loss function and a linear exponential loss function as an asymmetric loss function are employed to derive the Bayesian estimators. Credible intervals of the parameters, reliability function, hazard rate function and reversed hazard rate function are obtained. Predicting future observations is important in many fields, from finance and weather forecasting to healthcare and engineering. Thus, two-sample prediction (as a special case of the multi-sample prediction) for future observation is considered. An adaptive Metropolis algorithm is applied to conduct a simulation study to evaluate the performance of the Bayes estimates and predictors. Moreover, two applications of medical and engineering data sets are used to test and validate the theoretical results, ensuring that they are accurate, applicable to real-world scenarios and contribute to the understanding of the world and inform decision-making. Full article
(This article belongs to the Section Mathematics)
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<p>Trace plots of <inline-formula><mml:math id="mm1458"><mml:semantics><mml:mrow><mml:mi>α</mml:mi><mml:mo>,</mml:mo><mml:mo> </mml:mo><mml:mi>c</mml:mi></mml:mrow></mml:semantics></mml:math></inline-formula> and <inline-formula><mml:math id="mm1888"><mml:semantics><mml:mrow><mml:mi>k</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:semantics></mml:math></inline-formula></p>
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<p>Autocorrelation plots of <inline-formula><mml:math id="mm1469"><mml:semantics><mml:mrow><mml:mi>α</mml:mi><mml:mo>,</mml:mo><mml:mo> </mml:mo><mml:mi>c</mml:mi></mml:mrow></mml:semantics></mml:math></inline-formula> and <inline-formula><mml:math id="mm2999"><mml:semantics><mml:mrow><mml:mi>k</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:semantics></mml:math></inline-formula></p>
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<p>Histogram, posterior density and the lower and upper limits of the 95% credible intervals of <inline-formula><mml:math id="mm14744"><mml:semantics><mml:mrow><mml:mi>α</mml:mi><mml:mo>,</mml:mo><mml:mo> </mml:mo><mml:mi>c</mml:mi></mml:mrow></mml:semantics></mml:math></inline-formula> and <inline-formula><mml:math id="mm3444"><mml:semantics><mml:mrow><mml:mi>k</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:semantics></mml:math></inline-formula></p>
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<p>Trace plots of <italic>α</italic>, <italic>c</italic> and <italic>k</italic> for Wang’s data.</p>
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<p>Autocorrelation plots of <italic>α</italic>, <italic>c</italic> and <italic>k</italic> for Wang’s data.</p>
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<p>Histogram, posterior density and the lower and upper limits of the 95% credible intervals of the parameters of the Xg-BXII distribution for Wang’s data.</p>
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<p>Trace plots of the parameters <italic>α</italic>, <italic>c</italic> and <italic>k</italic> for COVID-19 data from the United Kingdom.</p>
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<p>Autocorrelation plots of the parameters <italic>α</italic>, <italic>c</italic> and <italic>k</italic> for COVID-19 data from the United Kingdom.</p>
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<p>Histogram, posterior density and the lower and upper limits of the 95% credible intervals of the parameters of the Xg-BXII distribution for COVID-19 data from the United Kingdom.</p>
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33 pages, 9060 KiB  
Article
A Q-Learning-Based Approach to Design an Energy-Efficient MAC Protocol for UWSNs Through Collision Avoidance
by Qiao Gang, Wazir Ur Rahman, Feng Zhou, Muhammad Bilal, Wasiq Ali, Sajid Ullah Khan and Muhammad Ilyas Khattak
Electronics 2024, 13(22), 4388; https://doi.org/10.3390/electronics13224388 - 8 Nov 2024
Viewed by 378
Abstract
Deploying and effectively utilizing wireless sensor networks (WSNs) in underwater habitats remains a challenging task. In underwater wireless sensors networks (UWSNs), the availability of a continuous energy source for communicating with nodes is either very costly or is prohibited due to the marine [...] Read more.
Deploying and effectively utilizing wireless sensor networks (WSNs) in underwater habitats remains a challenging task. In underwater wireless sensors networks (UWSNs), the availability of a continuous energy source for communicating with nodes is either very costly or is prohibited due to the marine life law enforcement agencies. So, in order to address this issue, we present a Q-learning-based approach to designing an energy-efficient medium access control (MAC) protocol for UWSNs through collision avoidance. The main goal is to prolong the network’s lifespan by optimizing the communication methods, specifically focusing on improving the energy efficiency of the MAC protocols. Factors affecting the energy consumption in communication are adjustments to the interference ranges, i.e., changing frequencies repeatedly to obtain optimal communication; data packet retransmissions in case of a false acknowledgment; and data packet collision occurrences in the channel. Our chosen protocol stands out by enabling sensor (Rx) nodes to avoid collisions without needing extra communication or prior interference knowledge. According to the results obtained through simulations, our protocol may increase the network’s performance in terms of network throughput by up to 23% when compared to benchmark protocols depending on the typical traffic load. It simultaneously decreases end-to-end latency, increases the packet delivery ratio (PDR), boosts channel usage, and lessens packet collisions by over 38%. All these gains result in minimizing the network’s energy consumption, with a proportional gain. Full article
(This article belongs to the Special Issue New Advances in Underwater Communication Systems)
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<p>Detailed overview of the designed paradigm.</p>
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<p>Example of a collision between system clusters.</p>
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<p>Example of transmitting data packets with collision or no collision at the same and different times.</p>
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<p>Tackling the hidden and exposed node challenges in UWCNs.</p>
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<p>Multi-cluster underwater wireless sensor network.</p>
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<p>Flow chart for our proposed system communication performance.</p>
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<p>Average network throughput vs. no. of nodes.</p>
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<p>Network throughput vs. traffic load.</p>
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<p>Average network delay vs. number of nodes.</p>
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<p>Different traffic loads vs. average delay.</p>
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<p>Average traffic time vs. no of nodes.</p>
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<p>Comparison of channel utilization and slot size.</p>
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<p>Comparison of channel utilization and slot size.</p>
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<p>Comparison of Q-value and action.</p>
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<p>Comparison of channel utilization and episode.</p>
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<p>PDR vs. average traffic load.</p>
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<p>PDR vs. number of nodes.</p>
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<p>Collision vs. avg. traffic load.</p>
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<p>Energy consumption vs. number of nodes.</p>
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<p>Energy consumption vs. offered load.</p>
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<p>Energy efficiency vs. avg. traffic load.</p>
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<p>Evaluation of the convergence values for Q-learning algorithm.</p>
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<p>Channel utilization vs. time blocks.</p>
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<p>Channel utilization vs. number of nodes.</p>
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<p>Energy consumption vs. number of nodes.</p>
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24 pages, 7699 KiB  
Article
Bridge Damage Localization Through Response Reconstruction with Multiple BP-ANNs Under Vehicular Loading
by Xuzhao Lu, Chenxi Wei, Limin Sun and Wei Zhang
Appl. Sci. 2024, 14(22), 10226; https://doi.org/10.3390/app142210226 - 7 Nov 2024
Viewed by 373
Abstract
Damage detection is a critical aspect of bridge health monitoring. While data reconstruction has been posited as a promising method for damage detection, its effectiveness in this context has rarely been empirically validated. In this study, we introduce a novel approach to pinpoint [...] Read more.
Damage detection is a critical aspect of bridge health monitoring. While data reconstruction has been posited as a promising method for damage detection, its effectiveness in this context has rarely been empirically validated. In this study, we introduce a novel approach to pinpoint potential bridge damage by reconstructing bridge inclination data. For an intact bridge, we selected reference cross-sections and trained multiple Backpropagation Artificial Neural Networks (BP-ANNs) to simulate transfer matrices for inclination between these base sections and other sections of the bridge. These BP-ANNs were then employed to reconstruct inclination data at the same cross-sections on a bridge with artificial damage. We demonstrated that damage localization is feasible through a comparison of the reconstructed and actual measured responses. The theoretical underpinnings of the transfer matrix and the damage localization method were initially elucidated through an analysis of the dynamics of a simplified vehicle–bridge interaction (VBI) system. A series of finite element models were constructed to substantiate the theoretical basis of the damage localization method. Additionally, a large-scale laboratory experiment was carried out to assess the practical effectiveness of the proposed method. The proposed method has been demonstrated to effectively pinpoint the location of potential structural damage. It successfully differentiates between areas in close proximity to the damage and those that are more distant. Compared to existing research, our method does not necessitate prior knowledge of factors such as mode shape functions, traffic conditions, or the constraint of inspecting with a single vehicle. This approach is anticipated to be more convenient for engineering applications, particularly in the development of online monitoring systems, due to its streamlined requirements and robust performance in identifying damage localization. Full article
(This article belongs to the Special Issue Structural Health Monitoring for Bridge Structures)
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Figure 1
<p>A simple VBI system [<a href="#B27-applsci-14-10226" class="html-bibr">27</a>].</p>
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<p>BP-ANN structure to model transfer matrix [<a href="#B27-applsci-14-10226" class="html-bibr">27</a>] (C-S: cross-sections).</p>
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<p>Flowchart of the proposed algorithm (CS is short for “responses measured at a cross-section”).</p>
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<p>Finite element model of the simple VBI system. (OP: observation points marked with dots. The stiffness reduction region is marked with a rectangle.)</p>
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<p>Time histories of displacement at five observation points for the intact bridge. (The dots denote the maximum displacement at each time history curve. The rectangle marks the high–frequency components with relatively lower amplitudes).</p>
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<p>Comparison of displacement time history for the damaged bridge between reconstructed (legend as “Reconstruction”) and simulated (legend as “Simulation”) results (the dots denote the largest displacement on each time history curve). (<b>a</b>) Comparison at OP-2 (the divergence (0.7 s) in time points corresponding to the maximum displacement between simulation and reconstruction results is marked with a dashed line and double arrow. Maximum displacement is marked with dots). (<b>b</b>) Comparison at OP-3 (the divergence in time points is about 0.1 s). (<b>c</b>) Comparison at OP-4 (the divergence in time points is not obvious).</p>
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<p>Comparison of displacement time history for the damaged bridge between reconstructed (legend as “Reconstruction”) and simulated (legend as “Simulation”) results (the dots denote the largest displacement on each time history curve). (<b>a</b>) Comparison at OP-2 (the divergence (0.7 s) in time points corresponding to the maximum displacement between simulation and reconstruction results is marked with a dashed line and double arrow. Maximum displacement is marked with dots). (<b>b</b>) Comparison at OP-3 (the divergence in time points is about 0.1 s). (<b>c</b>) Comparison at OP-4 (the divergence in time points is not obvious).</p>
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<p>Three-span steel continuous beam model (Unit: m).</p>
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<p>Steel platform and steel bridge [<a href="#B39-applsci-14-10226" class="html-bibr">39</a>].</p>
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<p>Cross-section of the steel bridge (unit: mm) [<a href="#B40-applsci-14-10226" class="html-bibr">40</a>].</p>
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<p>Electric vehicle [<a href="#B40-applsci-14-10226" class="html-bibr">40</a>]. ((<b>a</b>) Vehicle; (<b>b</b>) Geometric specifications; (<b>c</b>) Weighted mass blocks).</p>
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<p>Artificial damage (marked with rectangle).</p>
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<p>Layout of inclinometers on the middle span [<a href="#B40-applsci-14-10226" class="html-bibr">40</a>]. (<b>a</b>) Four cross-ections installed with inclinometers. (<b>b</b>) Location of inclinometer at each cross-section.</p>
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<p>Inclination time history at −4.4 m. (<b>a</b>) Full time history (rectangles mark the periods when the vehicle stops on the bridge). (<b>b</b>) One trip during which the vehicle runs across the bridge. (<b>c</b>) One trip during which the vehicle stops on the bridge (the rectangle, which is the section zoomed in from (<b>a</b>), marks the period during which the vehicle stops on the bridge).</p>
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<p>Inclination time history at −4.4 m. (<b>a</b>) Full time history (rectangles mark the periods when the vehicle stops on the bridge). (<b>b</b>) One trip during which the vehicle runs across the bridge. (<b>c</b>) One trip during which the vehicle stops on the bridge (the rectangle, which is the section zoomed in from (<b>a</b>), marks the period during which the vehicle stops on the bridge).</p>
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<p>Comparison between reconstructed and measured inclination time histories at −2.4 m and 2.4 m of the intact bridge (ellipses denote where the peak and valley amplitudes were selected). (<b>a</b>) Reconstruction result at −2.4 m. (<b>b</b>) Reconstruction result at 2.4 m.</p>
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<p>Comparison between reconstructed and measured inclination time histories at −2.4 m and 2.4 m of the intact bridge (ellipses denote where the peak and valley amplitudes were selected). (<b>a</b>) Reconstruction result at −2.4 m. (<b>b</b>) Reconstruction result at 2.4 m.</p>
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<p>Comparison of inclination time histories between reconstructed and measured results of the damaged bridge (ellipses denote where the peak and valley amplitudes were selected). (<b>a</b>) Reconstruction result at −2.4 m (the arrow marks the time point around 230 s, which corresponds to the highest amplitude). (<b>b</b>) Reconstruction result at 2.4 m.</p>
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<p>Comparison of inclination time histories between reconstructed and measured results of the damaged bridge (ellipses denote where the peak and valley amplitudes were selected). (<b>a</b>) Reconstruction result at −2.4 m (the arrow marks the time point around 230 s, which corresponds to the highest amplitude). (<b>b</b>) Reconstruction result at 2.4 m.</p>
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<p>Ratio between measured responses and reconstructed responses at −2.4 m and 2.4 m in the intact and damaged scenarios.</p>
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