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Search Results (395)

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22 pages, 7473 KiB  
Article
Land Use Transition and Regional Development Patterns Under Shared Socioeconomic Pathways: Evidence from Prefecture-Level Cities in China
by Xiaodong Zhang, Mingjie Yang, Rui Guo, Yaolong Li and Fanglei Zhong
Land 2025, 14(3), 454; https://doi.org/10.3390/land14030454 (registering DOI) - 22 Feb 2025
Viewed by 139
Abstract
This study evaluates the spatial–temporal evolution of land use intensity and regional development under five shared socioeconomic pathways (SSPs) through prefecture-level projections in China (2020–2050). This study integrates the population–development–environment model with back propagation (BP) neural networks, a supervised learning algorithm, to analyze [...] Read more.
This study evaluates the spatial–temporal evolution of land use intensity and regional development under five shared socioeconomic pathways (SSPs) through prefecture-level projections in China (2020–2050). This study integrates the population–development–environment model with back propagation (BP) neural networks, a supervised learning algorithm, to analyze how differentiated development trajectories reshape land systems. Results reveal distinct pathways: SSP5 (conventional development) and SSP1 (sustainability) achieve high-income thresholds by 2025/2028 with intensive land development, while SSP3 (fragmentation) risks stagnation post-2037 accompanied by inefficient land use. Spatial analysis identifies persistent dualism across the Hu Huanyong Line—83.6% of urban land expansion concentrates in eastern regions, whereas western areas exhibit 56% lower land productivity. By 2050, regional land use efficiency differentials (0.3–4.3% Gross Domestic Product/capita growth) highlight challenges in balancing urban agglomeration and ecological conservation. These findings provide empirical evidence for optimizing land allocation policies during China’s economic transition. Full article
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<p>Comparison of economic projection errors between the representative cities and four cities in Anhui Province.</p>
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<p>Population distribution of prefecture-level cities in the SSPs in 2050.</p>
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<p>Population growth rates of prefecture-level cities in China.</p>
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<p>GDP distributions in 2030 and 2050 in the SSPs. (<b>a</b>) GDP distributions in 2030. (<b>b</b>) GDP distributions in 2050.</p>
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<p>Changes in total GDP of cities with different income levels, total GDP, and growth in China under SSPs.</p>
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<p>Total distributions of per capita GDP in 2030 and 2050 under the SSPs. (<b>a1</b>) Total distributions of per capita GDP in 2030 under the SSP1. (<b>b1</b>) Total distributions of per capita GDP in 2050 under the SSP1. (<b>a2</b>) Total distributions of per capita GDP in 2030 under the SSP2. (<b>b2</b>) Total distributions of per capita GDP in 2050 under the SSP2. (<b>a3</b>) Total distributions of per capita GDP in 2030 under the SSP3. (<b>b3</b>) Total distributions of per capita GDP in 2050 under the SSP3. (<b>a4</b>) Total distributions of per capita GDP in 2030 under the SSP4. (<b>b4</b>) Total distributions of per capita GDP in 2050 under the SSP4. (<b>a5</b>) Total distributions of per capita GDP in 2030 under the SSP5. (<b>b5</b>) Total distributions of per capita GDP in 2050 under the SSP5.</p>
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<p>Total distributions of per capita GDP in 2030 and 2050 under the SSPs. (<b>a1</b>) Total distributions of per capita GDP in 2030 under the SSP1. (<b>b1</b>) Total distributions of per capita GDP in 2050 under the SSP1. (<b>a2</b>) Total distributions of per capita GDP in 2030 under the SSP2. (<b>b2</b>) Total distributions of per capita GDP in 2050 under the SSP2. (<b>a3</b>) Total distributions of per capita GDP in 2030 under the SSP3. (<b>b3</b>) Total distributions of per capita GDP in 2050 under the SSP3. (<b>a4</b>) Total distributions of per capita GDP in 2030 under the SSP4. (<b>b4</b>) Total distributions of per capita GDP in 2050 under the SSP4. (<b>a5</b>) Total distributions of per capita GDP in 2030 under the SSP5. (<b>b5</b>) Total distributions of per capita GDP in 2050 under the SSP5.</p>
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<p>Changes in total GDP per capita of cities at different income levels (<b>left</b>), total GDP per capita, and growth rates (<b>right</b>) in China under the SSPs.</p>
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<p>The expansion rate of land use in four regions of China in 2050 under the SSPs.</p>
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20 pages, 1873 KiB  
Article
Exploring the Effects of Carbon Pricing and Carbon Quota Control on the Energy Transition Towards Carbon Neutrality: A Computable General Equilibrium Analysis of the Zhejiang Region of China
by Bo Shi, Qiuhui Jiang, Minjun Shi and Shunsuke Managi
Energies 2025, 18(5), 1029; https://doi.org/10.3390/en18051029 - 20 Feb 2025
Viewed by 182
Abstract
The pathway towards carbon neutrality in regions with a relatively light industrial structure and scarce renewable energy resources presents a challenge when balancing energy efficiency improvements with the expansion of renewable energy. Therefore, this study investigates the effectiveness of carbon pricing and carbon [...] Read more.
The pathway towards carbon neutrality in regions with a relatively light industrial structure and scarce renewable energy resources presents a challenge when balancing energy efficiency improvements with the expansion of renewable energy. Therefore, this study investigates the effectiveness of carbon pricing and carbon quota control as regional carbon abatement policies. The findings demonstrate that carbon taxes are less effective than carbon emission quota control in economic growth and carbon abatement due to their weaker impact on energy efficiency enhancement and structural transition in the energy and industrial sectors. Moreover, stricter carbon pricing, determined by carbon emission goals, leads to greater reduction in sectoral carbon intensity but slower GDP growth caused by the accelerated decline of manufacturing and infrastructure industries compared to carbon intensity quota policies. In addition, carbon pricing derived from carbon emission and intensity quota policies increases reliance on domestically imported electricity, which is constrained by the availability of renewable energy resources. Full article
(This article belongs to the Special Issue Advances in Energy Transition to Achieve Carbon Neutrality)
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<p>Overall CGE model framework.</p>
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<p>GDP change rate of each scenario compared to BaU.</p>
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<p>Carbon emissions in each scenario (unit: million tons).</p>
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<p>Carbon intensity (CI) in each scenario (unit: ton/yuan).</p>
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<p>The primary energy consumption ratio for each scenario.</p>
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<p>Power generation ratio (hydro power excluded).</p>
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<p>Local oil product consumption change rates in each scenario compared to BaU.</p>
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19 pages, 1583 KiB  
Article
How Does China Explore the Synergetic Development of Automotive Industry and Semiconductor Industry with the Opportunity for Industrial Transformation?
by Wang Zhang, Fuquan Zhao and Zongwei Liu
Sustainability 2025, 17(4), 1753; https://doi.org/10.3390/su17041753 - 19 Feb 2025
Viewed by 240
Abstract
Amidst the unfolding technological revolution and industrial transformation, the synergistic development between China’s automotive and semiconductor industries has emerged as a salient trend. To explore the potential difficulties and pathways of the synergistic development of the two industries, this study conducted cross-sectional surveys [...] Read more.
Amidst the unfolding technological revolution and industrial transformation, the synergistic development between China’s automotive and semiconductor industries has emerged as a salient trend. To explore the potential difficulties and pathways of the synergistic development of the two industries, this study conducted cross-sectional surveys across three phases, specifically in March 2021, March 2022, and March 2024. The first phase of the survey identified that the two industries could mutually promote each other in both technical and market aspects and pinpointed three major challenges: computational capacity bottlenecks, supply chain risks, and unclear industrial cooperation models. The second phase of the survey discussed three opportunities to address the three challenges, respectively: intelligent vehicle infrastructure cooperative system, supply chain localization, and the reconstruction of the technology stack. The third phase of the survey summarized the development experience over the past three years, validated the aforementioned opportunities, and suggested the government promote the digitalization of vehicles and mobility, automotive companies use more domestic chips, and two industries build the ecological cooperation model. Full article
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<p>The demand for automotive digitalization for semiconductors.</p>
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<p>Localization rate of automotive semiconductors in China.</p>
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<p>Different cooperation modes between OEM and chip companies.</p>
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<p>Ecological cooperation model of automotive main control chips and computing platforms.</p>
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17 pages, 2398 KiB  
Article
Integration of Multiomics Data Reveals Selection Characteristics of ITGB1 That Are Associated with Size Differentiation in Pigs
by Guandong Wu, Miao Yu, Tianxin Liu, Dongjie Zhang, Yang Chang, Zhonghua Liu, Di Liu and Chunzhu Xu
Int. J. Mol. Sci. 2025, 26(4), 1569; https://doi.org/10.3390/ijms26041569 - 13 Feb 2025
Viewed by 311
Abstract
Min pigs, a prominent local breed from Northeast China, have diverged into two distinct breeds, Ermin (EM) pigs and Hebao (HB) pigs, through prolonged natural and artificial selection. Although these two breeds exhibit distinct differences in body size, the genetic mechanisms underlying this [...] Read more.
Min pigs, a prominent local breed from Northeast China, have diverged into two distinct breeds, Ermin (EM) pigs and Hebao (HB) pigs, through prolonged natural and artificial selection. Although these two breeds exhibit distinct differences in body size, the genetic mechanisms underlying this variation remain poorly understood. In this study, we performed whole-genome resequencing and transcriptome analysis on EM and HB pigs to elucidate the genetic basis of body size variation in Min pigs through genome-wide selection signal analysis and the identification of differentially expressed genes (DEGs). The analysis of genetic diversity and population genetic structure across 14 pig breeds revealed that, compared with other breeds, Min pigs present relatively high genetic diversity and a unique genetic structure. Notably, EM pigs exhibited significant genetic differentiation from HB pigs. Integrated analysis of whole-genome resequencing and transcriptome data revealed candidate genes associated with body size variation in Min pigs, including ENPP1, ENPP3, SPP1, CLU, ITGA11, ITGB1, IQGAP2, BMP7, and F2RL2. These genes are enriched primarily in pathways related to ECM–receptor interactions; pantothenate and CoA biosynthesis; starch and sucrose metabolism; nicotinate and nicotinamide metabolism; pyrimidine metabolism; nucleotide metabolism; cellular responses to lipids; biomineral tissue development; biomineralization; and other pathways related to cell signaling, metabolic responses, lipid deposition, and skeletal development. Notably, ITGB1 on chromosome 10 showed strong positive selection in EM pigs, with an SNP locus exhibiting a significant G/A allele frequency difference between EM pigs (G = 52.94%, A = 47.06%) and HB pigs (G = 0%, A = 100%). Our findings suggest that Min pigs potentially modulate lipid metabolism efficiency in adipose tissue through variations in the expression of the ITGB1 gene, potentially contributing to body size differences. These results provide new insights into the genetic mechanisms underlying body size variation in domestic pigs and serve as a valuable reference for identifying and breeding pig breeds with distinct body sizes. Full article
(This article belongs to the Section Molecular Biology)
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<p>Population genetic structure characteristics of 14 pig breeds. (<b>a</b>) PCA of 341 pigs analyzed in this study. PC1 and PC2 represent the first and second principal components, respectively. (<b>b</b>) Phylogenetic tree constructed via the NJ method, where each color denotes a different breed. (<b>c</b>) Population genetic structure inferred by ADMIXTURE, assuming nine ancestral clusters (K = 9). Each color represents an ancestral group, with each vertical line corresponding to an individual pig. Breed abbreviations are provided in <a href="#ijms-26-01569-t001" class="html-table">Table 1</a>.</p>
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<p>Genome-wide selective sweep signals identified in EM pigs compared with those in HB pigs. (<b>a</b>) Manhattan plot illustrating genome-wide selective signatures based on F<sub>ST</sub>, log<sub>10</sub> (θπ ratio), and XP-EHH between EM and HB pigs. The analysis was conducted using 500 kb windows with a 50 kb step size. The horizontal red line indicates the top 1% cutoff, while the horizontal blue line represents the top 5% cutoff. (<b>b</b>) Final selection regions identified via the F<sub>ST</sub> and θ<sub>π</sub> statistical methods. Points to the right of the vertical dashed line (corresponding to the top 5% of the empirical log<sub>2</sub> (<span class="html-italic">π<sub>A</sub></span>/<span class="html-italic">π<sub>B</sub></span>) ratio distribution, with a threshold of 1.223) and above the horizontal dashed line (representing the top 5% of the empirical F<sub>ST</sub> distribution, with a threshold of 0.49) were identified as selected regions for the EM pig population (green dots). (<b>c</b>) Venn diagram showing the overlap of genes identified by both the F<sub>ST</sub> &amp; log<sub>10</sub> (θ<sub>π</sub> ratio) and XP-EHH methods, with 242 genes shared between the two methods highlighted.</p>
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<p>Volcano map and selective signal analysis of DEGs and Venn map of DEGs between EM pigs and HB pigs at the same stage. (<b>a</b>) Each volcano plot displays gene expression changes at different time points (1 day, 30 days, 60 days, 90 days, and 120 days). The <span class="html-italic">x</span>-axis represents the log2 fold change, and the <span class="html-italic">y</span>-axis shows the −Log10 <span class="html-italic">p</span>-value. Genes are color-coded as follows: gray (nonsignificant), blue (significant log2 fold change only), green (significant <span class="html-italic">p</span>-value only), and red (both significant). The vertical dashed lines indicate a 2-fold change threshold, and the horizontal dashed line represents the significance threshold at <span class="html-italic">p</span> &lt; 0.05. The total number of variables analyzed is 9338. (<b>b</b>) Venn diagram displaying the overlap of genes identified by XP-EHH, the F<sub>ST</sub>/θ<sub>π</sub> ratio, and DESeq2 differential expression analysis. A total of 41 genes were identified by all three methods, as shown in the central overlapping region.</p>
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<p>Candidate gene interaction network and enrichment analysis of KEGG and GO pathways. (<b>a</b>) Donut chart showing the proportion of genes within the PPI network. Red indicates 11 genes that are connected (24% of the total), whereas blue represents 34 disconnected genes (76% of the total). (<b>b</b>) PPI network of the 11 connected genes. Each node represents a gene, with colored circles denoting individual genes and black lines indicating direct interactions between them. (<b>c</b>) Enrichment analysis of the top 10 pathways from KEGG and GO analysis for the 11 selected genes. The left panel shows enriched GO terms, and the right panel displays KEGG pathways. The colors in the middle Sankey chart represent the specific genes involved in each pathway.</p>
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<p>qRT–PCR results for candidate genes in different tissues in EM pigs and <span class="html-italic">ITGB1</span> timing analysis results for EM and HB pigs. (<b>a</b>) Relative expression levels of selected genes across various tissues in EM pigs. The <span class="html-italic">y</span>-axis represents gene expression levels relative to those in the dorsal muscle tissue, and the <span class="html-italic">x</span>-axis represents six different tissues: the dorsal muscle, psoas major, subcutaneous shoulder fat, subcutaneous waist fat, spleen, and ovary. (<b>b</b>) Expression levels of selected genes in the subcutaneous shoulder fat tissue of EM pigs. The <span class="html-italic">y</span>-axis represents gene expression levels in this tissue, whereas the <span class="html-italic">x</span>-axis shows the names of the different genes. (<b>c</b>) Expression of the <span class="html-italic">ITGB1</span> gene at different growth stages in EM and HB pigs. The <span class="html-italic">x</span>-axis represents the age in days (1, 30, 60, 90, and 120) for EM and HB pigs, and the <span class="html-italic">y</span>-axis represents the expression levels of <span class="html-italic">ITGB1</span> (* <span class="html-italic">p</span> ≤ 0.05, ** <span class="html-italic">p</span> ≤ 0.01, *** <span class="html-italic">p</span> ≤ 0.001, **** <span class="html-italic">p</span> ≤ 0.0001).</p>
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<p><span class="html-italic">ITGB1</span> haplotype analysis. (<b>a</b>) Haplotype analysis of SNPs in the upstream and downstream regions of the <span class="html-italic">ITGB1</span> gene in EM pigs. LD between SNPs is represented by squares, with red indicating higher LD values and white indicating lower LD values. Each square shows the LD value between a pair of SNPs, with thin lines linking the SNPs. (<b>b</b>) Structure of the <span class="html-italic">ITGB1</span> gene and the allele frequencies of three SNPs in the <span class="html-italic">ITGB1</span> gene and its flanking regions in the EM and HB pig populations. The yellow region represents the <span class="html-italic">ITGB1</span> gene, and the blue regions indicate the upstream and downstream sequences. Bar charts show the allele frequencies of each SNP (G and A alleles) in the EM and HB pigs.</p>
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15 pages, 3845 KiB  
Article
Prevalence and Genetic Diversity of Parasites in Humans and Pet Dogs in Rural Areas of Los Ríos Region, Southern Chile
by Daniel Sanhueza Teneo, Tamara Venegas, Francisca Videla, Cedric B. Chesnais, Carlos Loncoman and Guillermo Valenzuela-Nieto
Pathogens 2025, 14(2), 186; https://doi.org/10.3390/pathogens14020186 - 13 Feb 2025
Viewed by 446
Abstract
Parasitic infections pose a significant global health burden, affecting millions of people worldwide. Despite their importance, studies integrating human and animal parasitology to understand transmission pathways are scarce. This study, conducted between August 2022 and April 2023, aimed to investigate the prevalence of [...] Read more.
Parasitic infections pose a significant global health burden, affecting millions of people worldwide. Despite their importance, studies integrating human and animal parasitology to understand transmission pathways are scarce. This study, conducted between August 2022 and April 2023, aimed to investigate the prevalence of parasites in humans and domestic dogs in the Los Rios Region, southern Chile, and explore the risk factors associated with parasitism. A total of 291 human participants provided fecal and blood samples for parasitological and serological analyses, while 92 fecal samples from owned dogs were analyzed. The detection of intestinal parasites employed microscopy and molecular techniques, including next-generation sequencing (NGS). Anti-Toxocara canis and anti-Echinococcus granulosus antibodies in humans were assessed using ELISA. Socioeconomic surveys explored the risk factors associated with parasitism. The results showed a parasite prevalence of 39% in humans and 40% in dogs. Anti-Toxocara canis IgG antibodies were detected in 28.2% of humans. Zoonotic subtypes of Giardia duodenalis and Blastocystis sp. were identified. Thus, the results of our study indicate a high prevalence of intestinal and extraintestinal parasites in the human population of our region. Furthermore, our findings underscore the significant risk of zoonotic transmission of parasites from companion animals. This study contributes to the understanding of parasite transmission dynamics in southern Chile and has implications for public health policy and practice. The results emphasize the importance of considering the connection between human, animal, and environmental health to develop effective control strategies and mitigate the impact of parasitic infections. Full article
(This article belongs to the Section Parasitic Pathogens)
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<p>Number of patients with intestinal parasites by age range.</p>
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<p>Prevalence of human intestinal parasites in each commune of the Los Rios Region. Source: based on the image of Region de Los Rios by Biblioteca del Congreso Nacional de Chile.</p>
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<p>Prevalence of intestinal parasites in humans.</p>
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<p>(<b>A</b>) Prevalence of anti-<span class="html-italic">T. canis</span> antibodies in human serum samples; (<b>B</b>) number of samples with anti-<span class="html-italic">T. canis</span> antibodies per sampling site.</p>
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<p>Number of samples with intestinal parasites in dogs by commune.</p>
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<p>Number of samples with different parasite taxa found in feces of dogs by commune.</p>
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<p>Phylogenetic tree of <span class="html-italic">Blastocystis</span> sp., showing the position of our samples in the subtypes 1, 2, 3, 4, and 6. Bootstrap support values appear on the branches.</p>
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<p>Phylogenetic tree of <span class="html-italic">G. duodenalis</span>, showing the position of our samples in the assemblage A and D. Bootstrap support values appear on the branches.</p>
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<p>Geographic distribution of <span class="html-italic">Blastocystis</span> sp. subtypes in the different communes of the Los Rios Region. Source: Based on the image of Region de Los Rios by Biblioteca del Congreso Nacional de Chile.</p>
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<p>(<b>A</b>): Overall mean and SD of parasites over time. (<b>B</b>): Temporal variation in prevalence of intestinal parasites.</p>
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16 pages, 2868 KiB  
Article
Multi-Omic Analysis of the Differences in Growth and Metabolic Mechanisms Between Chinese Domestic Cattle and Simmental Crossbred Cattle
by Jie Wang, Jiale Ni, Xianbo Jia, Wenqiang Sun and Songjia Lai
Int. J. Mol. Sci. 2025, 26(4), 1547; https://doi.org/10.3390/ijms26041547 - 12 Feb 2025
Viewed by 355
Abstract
In livestock production, deeply understanding the molecular mechanisms of growth and metabolic differences in different breeds of cattle is of great significance for optimizing breeding strategies, improving meat quality, and promoting sustainable development. This study aims to comprehensively reveal the molecular-level differences between [...] Read more.
In livestock production, deeply understanding the molecular mechanisms of growth and metabolic differences in different breeds of cattle is of great significance for optimizing breeding strategies, improving meat quality, and promoting sustainable development. This study aims to comprehensively reveal the molecular-level differences between Chinese domestic cattle and Simmental crossbred cattle through multi-omics analysis, and further provide a theoretical basis for the efficient development of the beef cattle industry. The domestic cattle in China are a unique genetic breed resource. They have characteristics like small size, strong adaptability, and distinctive meat quality. There are significant differences in the growth rate and meat production between these domestic cattle and Simmental hybrid cattle. However, the specific molecular-level differences between them are still unclear. This study conducted a comprehensive comparison between the domestic cattle in China and Simmental crossbred cattle, focusing on microbiology, short-chain fatty acids, blood metabolome, and transcriptome. The results revealed notable differences in the microbial Simpson index between the domestic and Simmental crossbred cattle. The differential strain Akkermansia was found to be highly negatively correlated with the differential short-chain fatty acid isocaproic acid, suggesting that Akkermansia may play a key role in the differences observed in isocaproic acid levels or phenotypes. Furthermore, the transcriptional metabolomics analysis indicated that the differentially expressed genes and metabolites were co-enriched in pathways related to insulin secretion, thyroid hormone synthesis, bile secretion, aldosterone synthesis and secretion, and Cyclic Adenosine Monophosphate (cAMP) signaling pathways. Key genes such as ADCY8 and 1-oleoyl-sn-glycero-3-phosphocholine emerged as crucial regulators of growth and metabolism in beef cattle. Full article
(This article belongs to the Special Issue Molecular Genetics and Genomics of Ruminants)
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<p>Microbial composition and SCFAs content of TN and LB. The species composition of fecal microorganisms in the TN group and LB group covered two levels: phylum (<b>a</b>) and genus (<b>b</b>). (<b>c</b>) Short-chain fatty acids of TN and LB, 2-BA (2-Methylbutyric acid), 2-ECA (2-Ethylcaproic acid), 4-MVA (Isocaproic acid), AA (Acetic acid), BA (Butyric acid), CA (Caproic acid), DEA (Decanoic acid), HPA (Heptanoic acid), IBA (Isobutyric acid), IVA (Isovaleric acid), OA (Octanoic acid), PA (Propionic acid), VA (Valeric acid). (<b>d</b>) Microbial principal component analysis of TN and LB. (<b>e</b>) Differential microorganisms with LDA score greater than the set value (default setting of 4). (<b>f</b>) ASV-based histogram of PICRUSt2 differential pathway.</p>
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<p>Microbial composition and SCFAs content of TN and LB. The species composition of fecal microorganisms in the TN group and LB group covered two levels: phylum (<b>a</b>) and genus (<b>b</b>). (<b>c</b>) Short-chain fatty acids of TN and LB, 2-BA (2-Methylbutyric acid), 2-ECA (2-Ethylcaproic acid), 4-MVA (Isocaproic acid), AA (Acetic acid), BA (Butyric acid), CA (Caproic acid), DEA (Decanoic acid), HPA (Heptanoic acid), IBA (Isobutyric acid), IVA (Isovaleric acid), OA (Octanoic acid), PA (Propionic acid), VA (Valeric acid). (<b>d</b>) Microbial principal component analysis of TN and LB. (<b>e</b>) Differential microorganisms with LDA score greater than the set value (default setting of 4). (<b>f</b>) ASV-based histogram of PICRUSt2 differential pathway.</p>
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<p>Number of differentially expressed mRNAs in the control/experimental TN group compared to the LB group. (<b>a</b>) Volcano diagram of DEGs. (<b>b</b>) Hierarchical clustering of DEGs. (<b>c</b>) GO item enrichment of DEGs in the TN group compared with the LB group. (<b>d</b>) KEGG term enrichment of DEGs in the TN group and LB group.</p>
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<p>Shows the number of differential metabolites in the control/experimental TN group compared to the LB group. (<b>a</b>) Volcano diagram of differential metabolites. (<b>b</b>) Hierarchical clustering of differential metabolites. (<b>c</b>) KEGG term enrichment analysis of differential metabolites in the TN group and LB group.</p>
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<p>Correlation heatmap between differential SCFAs isocaproic acid concentrations and microbial species composition. Rows represent microorganisms, and columns represent metabolites. The phylogenetic tree on the left represents the hierarchical clustering results of microorganisms, while the phylogenetic tree on the upper side represents the hierarchical clustering results of metabolites. Red indicates a positive correlation, and green indicates a negative correlation. The <span class="html-italic">p</span>-value &lt; 0.05 of the significance test of the correlation coefficient indicates a significant difference, denoted by “*”, while the <span class="html-italic">p</span>-value &lt; 0.01 indicates a very significant difference, denoted by “**”. The figure shows the genus level.</p>
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<p>KEGG bubble diagram of the co-enrichment pathway of transcriptome and metabolome. The abscissa represents the enrichment factor (Diff/Background) of the pathway in different omics, and the ordinate represents the KEGG pathway name. The red–yellow–green gradient represents the change in the significance of enrichment from high–medium–low, which is represented by the <span class="html-italic">p</span>-value. The shape of the bubble represents different omics, and the size of the bubble represents the number of differential metabolites or genes; the larger the number, the larger the dots.</p>
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22 pages, 714 KiB  
Article
Research on the Effects of Carbon Emissions from China’s Technology Transfer: Domestic and International Perspectives
by Ling Wei and Bing Zeng
Economies 2025, 13(2), 44; https://doi.org/10.3390/economies13020044 - 12 Feb 2025
Viewed by 508
Abstract
Technology transfer represents a critical avenue for addressing the challenges associated with carbon emission reduction, warranting thorough investigation into the effects of both domestic and international technology transfer on carbon emissions. This study employs data mining techniques to extract comprehensive data on patent [...] Read more.
Technology transfer represents a critical avenue for addressing the challenges associated with carbon emission reduction, warranting thorough investigation into the effects of both domestic and international technology transfer on carbon emissions. This study employs data mining techniques to extract comprehensive data on patent transfers across 334 prefecture-level cities in China from 2000 to 2021, analyzing the influence of technology transfer on carbon emissions from both domestic and international perspectives. The findings indicate that domestic technology transfer and international technology transfer significantly contribute to carbon emission reduction, with international technology transfer exerting a more substantial effect than its domestic counterpart. To mitigate endogeneity concerns, the study utilizes the shortest distance from each city to the telegraph lines established during the late Qing Dynasty as an instrumental variable and the resulting conclusions remain robust. Heterogeneity tests reveal significant regional disparities, particularly in areas located southeast and northwest of the Hu Huanyong line, as well as between regions inside and outside the five major urban agglomerations. The mechanisms underlying carbon reduction suggest that improvements in energy efficiency and upgrades in industrial structure serve as the primary pathways for carbon emission reductions resulting from both domestic and foreign technology transfers. These conclusions provide a theoretical foundation and empirical insights to facilitate the acceleration of technology flow within the context of high-quality development, particularly concerning environmental protection. Full article
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<p>Mechanism analysis chart.</p>
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11 pages, 2301 KiB  
Article
The Role of Agricultural Wastes—Peanut Shells in Enhancing Algae–Bacteria Consortia Performance for Efficient Wastewater Treatment
by Yanlin Jiao, Jian Zhao, Nina Sun, Deyang Shi, Dejun Xia, Qingfu Du, Peng Li, Shuqi Mu, Chunxiao Wang, Tangyu Yuan and Meng Cao
Water 2025, 17(4), 485; https://doi.org/10.3390/w17040485 - 8 Feb 2025
Viewed by 464
Abstract
Carbon source limitation is a critical factor restricting the treatment efficiency of domestic wastewater by algae–bacteria consortia. Using agricultural waste as an external carbon source to enhance purification performance holds significant potential. This study investigated the effects of peanut shell powder (PSP) on [...] Read more.
Carbon source limitation is a critical factor restricting the treatment efficiency of domestic wastewater by algae–bacteria consortia. Using agricultural waste as an external carbon source to enhance purification performance holds significant potential. This study investigated the effects of peanut shell powder (PSP) on wastewater treatment in algae–bacteria consortia. The results demonstrated that the optimal PSP dosage (2 mg/L) improved the removal efficiencies of TN, TP, and COD by 29.6%, 40.9%, and 18.7%, respectively. In contrast, excessive PSP reduced the removal performance. The primary mechanism by which PSP influenced the algae–bacteria consortia involved changes in microbial biomass and community structure. An optimal PSP dosage promoted the proliferation of the dominant algal species, Chlorella, enhanced photosynthetic activity, and increased the relative abundance of Rhodanobacter, known for its effective degradation of benzene compounds. Conversely, excessive PSP caused microbial cell rupture, inhibited Chlorella growth and photosynthesis, and elevated the abundance of Microcystis and Brevundimonas, which pose significant health risks. In conclusion, PSP can improve effluent quality and safety in algae–bacteria consortia, which represents a green, economical pathway for optimizing wastewater treatment processes. Full article
(This article belongs to the Special Issue Applications of Microalgae and Macroalgae in Water Treatment)
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<p>Effects of different PSP doses on TN (<b>A</b>), TP (<b>B</b>), and COD (<b>C</b>) removal efficiency in wastewater.</p>
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<p>Impacts of various PSP doses on EEM fluorescence spectra of algae–bacteria consortia.</p>
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<p>Effects of PSP doses on cell membrane permeability (<b>A</b>), chlorophyll-a concentration (<b>B</b>), and maximum fluorescence quantum yield (F<sub>v</sub>/F<sub>m</sub>) (<b>C</b>).</p>
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<p>The impacts of PSP doses on the microbial community structure of algae–bacteria consortia (algae are highlighted in the green font; blue to red in the legend indicates the relative abundance of the microorganisms from low to high).</p>
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<p>Changes in sludge volume during sedimentation (<b>A</b>) and dry weight of supernatant after 48 h (<b>B</b>).</p>
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14 pages, 4569 KiB  
Article
Characterization of PRDM9 Multifunctionality in Yak Testes Through Protein Interaction Mapping
by Guowen Wang, Shi Shu, Changqi Fu, Rong Huang, Shangrong Xu, Jun Zhang and Wei Peng
Int. J. Mol. Sci. 2025, 26(4), 1420; https://doi.org/10.3390/ijms26041420 - 8 Feb 2025
Viewed by 461
Abstract
Meiotic recombination is initiated by the formation of programmed DNA double-strand breaks during spermatogenesis. PRDM9 determines the localization of recombination hotspots by interacting with several protein complexes in mammals. The function of PRDM9 is not well understood during spermatogenesis in mice or yaks. [...] Read more.
Meiotic recombination is initiated by the formation of programmed DNA double-strand breaks during spermatogenesis. PRDM9 determines the localization of recombination hotspots by interacting with several protein complexes in mammals. The function of PRDM9 is not well understood during spermatogenesis in mice or yaks. In this study, we applied yeast two-hybrid assays combined with next-generation sequencing techniques to screen the complete set of PRDM9-interacting proteins and explore its novel functions in yak spermatogenesis. Our results showed that 267 PRDM9-interacting proteins were identified. The gene ontology (GO) analysis of the interacting proteins revealed that the GO terms were primarily associated with spermatogenesis, positive regulation of double-strand break repair via homologous recombination, RNA splicing, the ubiquitin-dependent ERAD pathway, and other biological processes. MKX and PDCD5 were verified to be strongly interacting with PRDM9 and expressed in prophase I of meiosis in both mouse and yak testes. The localizations of RNA splicing genes including THOC5, DDX5, and XRCC6 were expressed in spermatocytes. Cattleyak is the hybrid offspring of a yak and a domestic cow, and the male offspring are sterile. The gene expression of the interacting proteins was also examined in the sterile male hybrid of yak and cattle. Among the 58 detected genes, 55 were downregulated in cattleyak. In conclusion, we established a complete PRDM9 interaction network, and a novel function of PRDM9 was identified, which will further promote our understanding of spermatogenesis. It also provides new insights for the study of hybrid male sterility. Full article
(This article belongs to the Special Issue Molecular Genetics and Genomics of Ruminants)
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<p>Histomorphology and localization of PRDM9 in the adult yak and cattleyak testes. (<b>A</b>) Hematoxylin and eosin (H&amp;E)-stained seminiferous tubule sections showing full spermatogenesis in yak, (<b>B</b>) while the cattleyak testis shows spermatogenesis defects. (<b>C</b>–<b>E</b>) Immunofluorescence staining of PRDM9 (green) and γH2AX (red) in a yak testis. (<b>F</b>–<b>H</b>) Immunofluorescence staining of PRDM9 (green) and γH2AX (red) in a cattleyak testis (scale bars = 50 μm). The negative control is shown in the bottom left corner of each figure. SPG = spermatogonia; SPCs = spermatocytes; RSs = round spermatids; ESs = elongating spermatids; SCs = Sertoli cells; LCs = Leydig cells; zygs = zygotene spermatocytes; pachs = pachytene spermatocytes; sb = sex body.</p>
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<p>Detection of pGBKT7-PRDM9 self-activation. pGBKT7-PRDM9 and pGBKT7 plasmid-transformed AH109 strains were seeded into an SD-T, SD-TH, SD-THA, SD-THA+X-α-gal nutritional selected medium. T: Trp, TH: Trp/His, THA: Trp/His/Ade.</p>
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<p>KEGG and GO analysis of PRDM9-interacting genes. (<b>A</b>) KEGG analysis of PRDM9-interacting genes. (<b>B</b>) GO analysis of PRDM9-interacting genes.</p>
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<p>HDOCK server analysis of the interaction between PRDM9 and MKX, as well as PDCD5. (<b>A</b>) The crystal structure of the interaction between PRDM9 and MKX. (<b>B</b>) The crystal structure of the interaction between PRDM9 and PDCD5.</p>
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<p>MKX localization in mouse, yak, and cattleyak. (<b>A</b>–<b>C</b>) MKX localization in adult mouse testis. MKX (green), SCP3 (red). (<b>D</b>–<b>F</b>) MKX localization in adult yak testis. MKX (green), γH2AX (red). (<b>G</b>–<b>I</b>) MKX localization in adult cattleyak testis. MKX (green), γH2AX (red) (scale bars = 50 μm). The negative control is shown in the bottom left corner of each figure. SPG = spermatogonia; SCs = Sertoli cells; LCs = Leydig cells; leps = leptene spermtocytes; pachs = pachytene spermatocytes; sb = sex body.</p>
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<p>PDCD5 localization in mouse, yak, and cattleyak. (<b>A</b>–<b>C</b>) PDCD5 localization in adult mouse testis. PDCD5 (green), SCP3 (red). (<b>D</b>–<b>F</b>) PDCD5 localization in adult yak testis. PDCD5 (green), γH2AX (red). (<b>G</b>–<b>I</b>) PDCD5 localization in adult cattleyak testis. MKX (green), γH2AX (red) (scale bars = 50 μm). The negative control is shown in the bottom left corner of each figure. SPG = spermatogonia; SCs = Sertoli cells; LCs = Leydig cells; leps = leptene spermtocytes; pachs = pachytene spermatocytes; sb = sex body.</p>
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<p>PRDM9 interaction network of yak. The network was created using published mouse data and yak Y2H-seq data from this study. The yellow circles represent proteins that have been proven to directly interact with PRDM9. The others are novel proteins that were found to interact with PRDM9 in yak.</p>
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19 pages, 2136 KiB  
Review
Exploring the Therapeutic Potential of Mitragynine and Corynoxeine: Kratom-Derived Indole and Oxindole Alkaloids for Pain Management
by Ahmed S. Alford, Hope L. Moreno, Menny M. Benjamin, Cody F. Dickinson and Mark T. Hamann
Pharmaceuticals 2025, 18(2), 222; https://doi.org/10.3390/ph18020222 - 6 Feb 2025
Viewed by 765
Abstract
The search for effective pain management solutions remains a critical challenge, especially amidst growing concerns over the use of conventional opioids. In the US, opioid-related mortality rates have surged to as many as 80 deaths per 100,000 people in some states, with an [...] Read more.
The search for effective pain management solutions remains a critical challenge, especially amidst growing concerns over the use of conventional opioids. In the US, opioid-related mortality rates have surged to as many as 80 deaths per 100,000 people in some states, with an estimated economic burden of USD 1.5 trillion annually—exceeding the gross domestic product (GDP) of most US industrial sectors. A remarkable breakthrough lies in the discovery that indole and oxindole alkaloids, produced by several genera within the plant Tribe Naucleeae, act on opioid receptors without activating the beta-arrestin-2 pathway, the primary driver of respiratory depression and overdose deaths. This systematic review explores the pharmacological properties, mechanisms of action, dosing considerations, interactions, and long-term effects of mitragynine and corynoxeine, alkaloids from the Southeast Asian plant Mitragyna speciosa (kratom) and others in the Tribe Naucleeae. Mitragynine, a partial opioid receptor agonist, and corynoxeine, known for its anti-inflammatory and neuroprotective effects, demonstrate significant therapeutic potential for managing diverse pain types—including neuropathic, inflammatory, nociceptive, visceral, and central pain syndromes—with a focus on cancer pain. Unlike traditional opioids, these compounds do not recruit beta-arrestin-2, avoiding key adverse effects such as respiratory depression, severe constipation, and rapid tolerance development. Their distinct pharmacological profiles make them innovative candidates for safer, non-lethal pain relief. However, challenges persist, including the unregulated nature of kratom products, inconsistencies in potency due to crude extract variability, potential for misuse, and adverse drug interactions. Addressing these issues requires establishing standardized quality control protocols, such as Good Manufacturing Practices (GMP), to ensure consistent potency and purity. Clear labeling requirements with dosage guidelines and warnings should be mandated to ensure safe use and prevent misuse. Furthermore, the implementation of regulatory oversight to monitor product quality and enforce compliance is essential. This review emphasizes the urgency of focused research to optimize dosing regimens, characterize the pharmacodynamic profiles of these alkaloids, and evaluate long-term safety. By addressing these gaps, the mitragynine- and corynoxeine-related drug classes can transition from promising plant-derived molecules to validated pharmacotherapeutic agents, potentially revolutionizing the field of pain management. Full article
(This article belongs to the Section Natural Products)
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<p><span class="html-italic">Mitragyna speciosa</span>, commonly known as kratom, contains bioactive secondary metabolites, specifically indoles (e.g., mitragynine) and oxindoles (e.g., corynoxeine).</p>
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<p>Polypharmacology of mitragynine, the principal indole alkaloid derived from <span class="html-italic">Mitragyna speciosa</span>.</p>
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<p>Summary of adverse drug reactions associated with mitragynine and corynoxeine.</p>
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13 pages, 2282 KiB  
Article
Research on the Carbon Footprint Accounting Method of Transformer’s Whole Life Cycle Under the Background of Double Carbon
by Wei Li, Yifan Bian, Yunyun Zhang, Erbiao Zhou and Lirong Xie
Energies 2025, 18(3), 499; https://doi.org/10.3390/en18030499 - 22 Jan 2025
Viewed by 512
Abstract
In response to the existing gaps in the carbon footprint assessment framework for core electrical equipment transformers, which impedes power companies from effectively supporting low-carbon procurement of materials and products, this study proposes a novel evaluation method for transformer carbon footprints. This method [...] Read more.
In response to the existing gaps in the carbon footprint assessment framework for core electrical equipment transformers, which impedes power companies from effectively supporting low-carbon procurement of materials and products, this study proposes a novel evaluation method for transformer carbon footprints. This method comprehensively considers all stages of the transformer lifecycle, including manufacturing, transportation, installation, operation, and decommissioning. A review of mainstream carbon footprint accounting schemes, both domestic and international, is first presented, summarizing established accounting methods and calculation processes. The paper then introduces a novel, integrated carbon footprint accounting approach for transformers, covering the entire ‘cradle-to-grave’ lifecycle, along with an associated calculation model. This framework analyzes the carbon footprint composition across production, assembly, transportation, usage, and recycling stages for four commonly used, high-efficiency transformers at State Grid Xinjiang Electric Power Company, the carbon footprint of an oil-immersed 100 kVA/10 kV transformer is 2.353 × 106 kg CO2e, approximately half that of a conventional 100 kVA/10 kV transformer. Finally, the study provides recommendations for carbon reduction pathways for transformers, considering both functional substitution and technological carbon reduction strategies. Full article
(This article belongs to the Section B: Energy and Environment)
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<p>Transformer carbon footprint accounting flowchart.</p>
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<p>Transformer carbon footprint accounting implementation pathway map.</p>
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<p>Transformer carbon footprint data collection and screening.</p>
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<p>Carbon footprint composition of 10 kV oil-immersed transformers.</p>
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<p>Carbon footprint composition of 10 kV dry-type transformer.</p>
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19 pages, 4578 KiB  
Article
Identifying Administrative Villages with an Urgent Demand for Rural Domestic Sewage Treatment at the County Level: Decision Making from China Wisdom
by Zixuan Wang, Pengyu Li, Wenqian Cai, Zhining Shi, Jianguo Liu, Yingnan Cao, Wenkai Li, Wenjun Wu, Lin Li, Junxin Liu and Tianlong Zheng
Sustainability 2025, 17(2), 800; https://doi.org/10.3390/su17020800 - 20 Jan 2025
Viewed by 704
Abstract
Rural domestic sewage management is a crucial pathway for achieving Sustainable Development Goal (SDG) 6 targets. Addressing the crucial challenge of prioritizing administrative villages for rural domestic sewage treatment at the county scale requires dedicated planning. However, county-level comprehensive evaluation models designed specifically [...] Read more.
Rural domestic sewage management is a crucial pathway for achieving Sustainable Development Goal (SDG) 6 targets. Addressing the crucial challenge of prioritizing administrative villages for rural domestic sewage treatment at the county scale requires dedicated planning. However, county-level comprehensive evaluation models designed specifically for this purpose are currently limited. To address this gap, we developed a model based on 13 evaluation indicators encompassing village distribution characteristics, villager demographics, rural economic levels, and sanitation facility conditions. To gauge the varying emphasis on these factors by different groups, a questionnaire survey was conducted among experts, enterprises, and government departments involved in the rural sewage sector in China. Two counties from distinct regions were then chosen to validate these models. The Analytic Hierarchy Process (AHP) coupled with the Technique for Order Preference by Similarity to Ideal Solution (TOPSIS) method was employed to rank the importance of the factors and determine the prioritization of rural domestic sewage management in each area. The model results indicated that priority should be given to the county government, township government, ecologically sensitive areas, and administrative villages near tourist attractions in the two selected empirical counties for governance. A sensitivity analysis showed that altitude consistently exhibited high sensitivity in influencing the ranking results across all scenarios (0.4–0.6). In addition, the empirical results obtained were largely consistent with the priorities of local governments. The proposed framework offers a practical application for decision-making systems in rural domestic sewage management at the county level, providing theoretical support and scientific strategies. This holds great significance for achieving SDG 6. Full article
(This article belongs to the Section Sustainable Water Management)
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<p>Research framework for evaluating the priority strategy of domestic sewage treatment in administrative villages.</p>
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<p>The criterion layer index weightings of (<b>a</b>) village distribution characteristics; (<b>b</b>) basic characteristics of villagers; (<b>c</b>) village economic levels; and (<b>d</b>) sanitation facility conditions for 8 major agricultural regions.</p>
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<p>The sub-criteria weightings for the 8 major agricultural regions, including the geographic locations of each region.</p>
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<p>The ranking of the priority treatment of rural domestic sewage in county-level administrative villages of H County in the middle and lower reaches of the Yangtze River and F County in Yungui Plateau regions, China. (<b>a</b>) H County in the middle and lower reaches of the Yangtze River; (<b>b</b>) F County in Yungui Plateau regions. Note: The blank regions are uninvestigated villages and the county built-up areas. The county built-up areas lack a rural population, so they have been excluded from the study.</p>
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<p>Sobol sensitivity analysis of the AHP-TOPSIS ranking for two counties. The first-order indices (S1) measure the impact of individual input parameters on the output. Total effect indices (ST) assess the influence of individual input parameters and their interactions with each other on the output result. Both indicators range from 0 to 1. (<b>a</b>) Sobol sensitivity analysis results for the rural domestic sewage treatment ranking of administrative villages in H County, the middle and lower reaches of the Yangtze River; (<b>b</b>) Sobol sensitivity analysis results for the rural domestic sewage treatment ranking of administrative villages in F County, Yungui Plateau regions. VT = Village type; VW = villagers’ will; WS = water supply; E = elevation; POTI = proportion of toilet improvement; DONV = dispersion of natural villages; HD = housing dispersion; PORP = proportion of resident population.</p>
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35 pages, 6500 KiB  
Article
Historical Analysis of Real Energy Consumption and Indoor Conditions in Single-Family Passive Building
by Szymon Firląg, Abdullah Sikander Baig and Dariusz Koc
Sustainability 2025, 17(2), 717; https://doi.org/10.3390/su17020717 - 17 Jan 2025
Viewed by 663
Abstract
The paper includes a historical analysis of real energy consumption and indoor conditions in a single-family passive building located in Warsaw, Poland. Passive houses have emerged as a sustainable alternative to the conventional construction of houses, having advantages such as low energy consumption, [...] Read more.
The paper includes a historical analysis of real energy consumption and indoor conditions in a single-family passive building located in Warsaw, Poland. Passive houses have emerged as a sustainable alternative to the conventional construction of houses, having advantages such as low energy consumption, comfortable indoor temperatures, an environmentally friendly nature, and low carbon emissions. This research consists of indoor temperature assessments over a 5-year period (2018–2022) which include comfort assessments made in accordance with the standard EN 16798-1 and precise assessments made for extreme weather events over a two-week critical period including the heating and cooling seasons. The real energy consumption analysis, including electric heating, outdoor lighting, indoor lighting, ventilation, and domestic hot water, was compared against passive house and nearly-zero energy standards. The results of the study show that the building is thermally comfortable to live in, as it remained mainly in the first comfort category, IEQ I. There was no such issue as overheating and underheating even during extreme weather events. The energy need for heating remained very close to the passive standard, namely 15 kWh/(m2·year). The total primary energy consumption for heating, hot water, and electricity meets the standard required value of 120 kWh/(m2·year). These findings demonstrate the effectiveness of passive house design principles at achieving high levels of thermal comfort and energy efficiency in cold climates. In addition, it is demonstrated that it is possible to maintain comfortable indoor temperatures (even with outdoor air temperatures reaching 35 °C) without air conditioning or cooling systems. The integration of a photovoltaic system offers a viable pathway toward transforming the building into a zero-energy standard, contributing to sustainability goals and reducing carbon emissions. Full article
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<p>Fuel share of residential heating in Europe [<a href="#B8-sustainability-17-00717" class="html-bibr">8</a>].</p>
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<p>General View of the building, source: KAPE.</p>
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<p>View of the southern facade of the building, source: KAPE.</p>
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<p>Ground floor layout, source: KAPE.</p>
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<p>Inside and outside temperature patterns during an extreme cold event, 2018.</p>
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<p>Inside and outside temperature patterns during an extreme hot event, 2018.</p>
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<p>Inside and outside temperature patterns during an extreme cold event, 2019.</p>
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<p>Inside and outside temperature patterns during an extreme hot event, 2019.</p>
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<p>Inside and outside temperature patterns during an extreme cold event, 2020.</p>
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<p>Inside and outside temperature patterns during an extreme hot event, 2020.</p>
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<p>Inside and outside temperature patterns during an extreme cold event, 2021.</p>
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<p>Inside and outside temperature patterns during an extreme hot event, 2021.</p>
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<p>Inside and outside temperature patterns during an extreme cold event, 2022.</p>
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<p>Inside and outside temperature patterns during an extreme hot event, 2022.</p>
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<p>Year-over-year comparisons of the final energy consumption balance (1.5 mb firewood).</p>
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<p>South-eastern view of the panels.</p>
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29 pages, 3624 KiB  
Review
Battery Health Monitoring and Remaining Useful Life Prediction Techniques: A Review of Technologies
by Mohamed Ahwiadi and Wilson Wang
Batteries 2025, 11(1), 31; https://doi.org/10.3390/batteries11010031 - 17 Jan 2025
Viewed by 1044
Abstract
Lithium-ion (Li-ion) batteries have become essential in modern industries and domestic applications due to their high energy density and efficiency. However, they experience gradual degradation over time, which presents significant challenges in maintaining optimal battery performance and increases the risk of unexpected system [...] Read more.
Lithium-ion (Li-ion) batteries have become essential in modern industries and domestic applications due to their high energy density and efficiency. However, they experience gradual degradation over time, which presents significant challenges in maintaining optimal battery performance and increases the risk of unexpected system failures. To ensure the reliability and longevity of Li-ion batteries in applications, various methods have been proposed for battery health monitoring and remaining useful life (RUL) prediction. This paper provides a comprehensive review and analysis of the primary approaches employed for battery health monitoring and RUL estimation under the categories of model-based, data-driven, and hybrid methods. Generally speaking, model-based methods use physical or electrochemical models to simulate battery behaviour, which offers valuable insights into the principles that govern battery degradation. Data-driven techniques leverage historical data, AI, and machine learning algorithms to identify degradation trends and predict RUL, which can provide flexible and adaptive solutions. Hybrid approaches integrate multiple methods to enhance predictive accuracy by combining the physical insights of model-based methods with the statistical and analytical strengths of data-driven techniques. This paper thoroughly evaluates these methodologies, focusing on recent advancements along with their respective strengths and limitations. By consolidating current findings and highlighting potential pathways for advancement, this review paper serves as a foundational resource for researchers and practitioners working to advance battery health monitoring and RUL prediction methods across both academic and industrial fields. Full article
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<p>Degradation curves showing charge capacity for batteries #5, #6, and #7.</p>
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<p>SOH degradation over time, showing progression toward the end-of-life threshold.</p>
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<p>Increase in internal resistance over time indicating gradual battery degradation.</p>
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<p>Progression of voltage profiles over discharge cycles, showing a transition from early (blue) to late (red) cycles to indicate declining energy with aging.</p>
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<p>Illustration of the advancements in KF-based methods and their future directions.</p>
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<p>Influence of resampling on particle diversity, contributing to impoverishment.</p>
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<p>Illustration of strategies addressing PF limitations, strengths and challenges.</p>
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<p>Illustration of how hybrid approaches combine the strengths of model-based and data-driven approaches.</p>
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18 pages, 2067 KiB  
Article
Transcriptome Analysis Reveals Key Genes Involved in the Response of Triticum urartu to Boron Toxicity Stress
by Gul Sema Uyar, Anamika Pandey, Mehmet Hamurcu, Tomas Vyhnanek, Mustafa Harmankaya, Ali Topal, Sait Gezgin and Mohd. Kamran Khan
Agronomy 2025, 15(1), 191; https://doi.org/10.3390/agronomy15010191 - 15 Jan 2025
Viewed by 538
Abstract
The domestication and breeding of wheat genotypes through the years has led to the loss in their genetic variation, making them more prone to different abiotic stresses. Boron (B) toxicity is one of the stresses decreasing the wheat cultivars’ yield in arid and [...] Read more.
The domestication and breeding of wheat genotypes through the years has led to the loss in their genetic variation, making them more prone to different abiotic stresses. Boron (B) toxicity is one of the stresses decreasing the wheat cultivars’ yield in arid and semi-arid regions around the world. Wild wheat progenitors, such as Triticum urartu Thumanian ex Gandilyan, possess a broader gene pool that harbors several genes conferring tolerance to various biotic and abiotic stresses. Unfortunately, T. urartu is not well-explored at the molecular level for its tolerance towards B toxicity in soil. In this study, for the first time, we compared the transcriptomic changes in the leaves of a high B-tolerant T. urartu genotype, PI662222, grown in highly toxic B (10 mM B in the form of boric acid) with the ones grown in the control (3.1 μM B) treatment in hydroponic conditions. The obtained results suggest that several mechanisms are involved in regulating the response of the studied T. urartu genotype toward B toxicity. All the growth parameters of T. urartu genotype, including root–shoot length, root fresh weight, and root–shoot dry weight, were less affected by high boron (10 mM) as compared to the boron-tolerant bread wheat cultivar. With a significant differential expression of 654 genes, 441 and 213 genes of T. urartu genotype were down- and upregulated, respectively, in the PI662222 leaves in high B in comparison to the control treatment. While key upregulated genes included those encoding RNA polymerase beta subunit (chloroplast), ATP synthase subunit gamma, chloroplastic, 60S ribosomal protein, and RNA-binding protein 12-like, the main downregulated genes included those encoding photosystem II protein D, ribulose bisphosphate carboxylase small subunit, and peroxidase 2-like. Interestingly, both Gene Ontology enrichment and KEGG pathways emphasized the possible involvement of the genes related to the photosynthetic process and apparatus in the high B tolerance of the T. urartu genotype. The further functional characterization of the identified potential T. urartu genes will facilitate their utilization in crop improvement programs for B toxicity stress. Full article
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<p>The MA plot displays genes that are differentially expressed (blue and red dots) in the leaves of the <span class="html-italic">T. urartu</span> (Tu) genotype PI662222 treated with high boron (B) (TB 10 mM) as opposed to 3.1 µM B (control) treatment. The log2-transformed mean expression level is represented by the X-axis (A) and the log2-transformed fold change by the Y-axis (M).</p>
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<p>Gene Ontology grouping of differentially expressed genes in <span class="html-italic">T. urartu</span> leaves grown in a B toxic environment (10 Mm B) as compared to the control (3.1 μM B) treatment. While the X-axis shows the number of DEGs in different groups, the Y-axis denotes the different Gene Ontology groups.</p>
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<p>KEGG pathway functional enrichment of differentially expressed genes of <span class="html-italic">T. urartu</span> leaves under a B-toxic growing environment (10 Mm B) as compared to the control (3.1 μM B) treatment. The enrichment factor is denoted on the X-axis and the name of the pathway is shown on the Y-axis. The significant enrichment is understood by a larger enrichment factor. The point size belongs to the DEG number.</p>
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<p>Transcription factor families of differentially expressed genes of <span class="html-italic">T. urartu</span> leaves under a B-toxic growing environment (10 mM B) as compared to the control treatment (3.1 μM B).</p>
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<p>Relative differential expression of <span class="html-italic">TuαDOX-like</span>, <span class="html-italic">TuGDSL-like</span>, and <span class="html-italic">TuFTSH9-like</span> genes with respect to the reference gene, <span class="html-italic">TaGAP</span>. The values are provided as average expression values of three individual replicates with the standard error mean normalized to the control.</p>
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