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23 pages, 19140 KiB  
Article
Enhancing Spatial Awareness and Collaboration: A Guide to VR-Ready Survey Data Transformation
by Joseph Kevin McDuff, Armin Agha Karimi and Zahra Gharineiat
ISPRS Int. J. Geo-Inf. 2025, 14(2), 59; https://doi.org/10.3390/ijgi14020059 - 2 Feb 2025
Viewed by 525
Abstract
Surveying and spatial science are experiencing a paradigm shift from traditional data outputs to more immersive and interactive formats, driven by the rise in Virtual Reality (VR). This study addresses the challenge of transforming UAV (Unmanned Aerial Vehicle)-acquired photogrammetry data into VR-compatible surfaces [...] Read more.
Surveying and spatial science are experiencing a paradigm shift from traditional data outputs to more immersive and interactive formats, driven by the rise in Virtual Reality (VR). This study addresses the challenge of transforming UAV (Unmanned Aerial Vehicle)-acquired photogrammetry data into VR-compatible surfaces while preserving the accuracy and quality crucial to professional surveying. The study leverages Blender, an open-source 3D creation tool, to develop a procedural guide for creating VR-ready models from high-quality survey data. The case study focuses on silos located in Yelarbon, Southeast Queensland, Australia. UAV mapping is utilised to gather the data necessary for 3D modelling with a few minor alterations in the photo capturing angle and processing. Key findings reveal that while Blender excels as a visualisation tool, it struggles with geospatial precision, particularly when handling large numbers coming from coordinate systems, leading to rounding errors seen within the VR model. Blender’s strength lies in creating immersive experiences for public engagement but is constrained by its lack of capability to hold survey metadata, hindering its applicability for professional survey-grade outputs. The results highlight the need for further development into possible Blender plugins that integrate geospatial accuracy with VR outputs. This study underscores the potential of VR to enhance how survey data are visualised, offering opportunities for future innovations in both the technical and creative aspects of the surveying profession. Full article
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<p>The Yelarbon silo art—‘When the Rain Comes’, (GrainCorp owned).</p>
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<p>Images from the fieldwork for the project and the drone utilised for data collection.</p>
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<p>Drone data capture trajectory. The side view is chosen to highlight oblique view data collection.</p>
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<p>Oblique imagery of the Yelarbon Silo, highlighting the project case study location, including GCP, PSM, and Rico Pictures utilised for both photogrammetry and land surveying data collection.</p>
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<p>Workflow for modelling VR in Blender.</p>
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<p>(<b>a</b>) Blender basic elements, (<b>b</b>) Blender normals with different variations, such as split normals, which separate normals for each selected vertex, and vertex normals, which are 3D coordinates representing lines that are perpendicular to the model’s surface geometry.</p>
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<p>Blender’s Viewport Shading Modes: (<b>a</b>) Wireframe Mode provides a clear view of the model’s underlying geometry, allowing for an inspection of the vertex and edge structures. (<b>b</b>) Solid Mode displays the model’s surface without textures, aiding in the identification of any geometric inconsistencies. (<b>c</b>) Rendered Display Mode gives a preview of the textured model, allowing us to evaluate texture alignment, lighting, and other visual elements before final rendering.</p>
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<p>(<b>a</b>) Blender nodes connected to the Principled BSDF to create texture effects for the model. (<b>b</b>) Principled BSDF is a shader node that combines multiple layers into one to model a variety of materials.</p>
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<p>(<b>a</b>) The Principled BSDF demonstrating the effects of mixing texture values such as subsurface, metallic, and transmission (<b>b</b>) metallic properties from values of 0 to 1.0, (<b>c</b>) roughness properties from values of 0 to 1.0, and (<b>d</b>) index of refraction Properties from values of 0 to 1.0.</p>
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<p>(<b>a</b>) Higher colour saturation model at a saturation value of 5 and a vale value of 0.9; (<b>b</b>) more natural saturation mode with a saturation value of 0 and a vale value of 1.</p>
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<p>Quartiles split the data into four parts with an equal number of observations. Source: <a href="https://www.scribbr.com/statistics/quartiles-quantiles/" target="_blank">https://www.scribbr.com/statistics/quartiles-quantiles/</a> (accessed 31 January 2025).</p>
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<p>(<b>a</b>) The photogrammetric model with baseline spheres created in Maptek Point Studio. These silo spheres act as essential references for identifying potential deformities introduced during data processing in Blender. The baseline measurements from Maptek provide a crucial comparison point to validate the accuracy of the AgiSoft-generated surfaces when transformed within Blender’s coordinate system. (<b>b</b>) High-precision measurements obtained by land surveying. (<b>c</b>) The silo sphere measurements from each of the eight silos. These measurements are used to determine whether Blender maintains the relative alignment and surface integrity of the silos after being imported.</p>
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<p>(<b>a</b>) The photogrammetric model, which shows no distortion, and (<b>b</b>) the VR model that has visible distortions.</p>
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20 pages, 2989 KiB  
Article
A Review of Pakistan’s National Spatial Data Infrastructure Using Multiple Assessment Frameworks
by Munir Ahmad, Asmat Ali, Muhammad Nawaz, Farha Sattar and Hammad Hussain
ISPRS Int. J. Geo-Inf. 2024, 13(9), 328; https://doi.org/10.3390/ijgi13090328 - 14 Sep 2024
Cited by 1 | Viewed by 1342
Abstract
Efforts to establish Pakistan’s National Spatial Data Infrastructure (NSDI) have been underway for the past 15 years, and therefore it is necessary to gauge the current progress to channelize efforts into areas that need improvement. This article assessed Pakistan’s NSDI implementation efforts through [...] Read more.
Efforts to establish Pakistan’s National Spatial Data Infrastructure (NSDI) have been underway for the past 15 years, and therefore it is necessary to gauge the current progress to channelize efforts into areas that need improvement. This article assessed Pakistan’s NSDI implementation efforts through well-established approaches, including the SDI readiness model, organizational aspects, and state of play. The data were collected from Spatial Data Infrastructure (SDI) and Geographic Information System (GIS) experts. The findings underscored challenges related to human resources, SDI education/culture, long-term vision, lack of awareness of geoinformation (GI), sustainable funding, metadata availability, online geospatial services, and geospatial standards hindering NSDI development in Pakistan. However, certain factors exhibit favorable standings, such as the legal framework for NSDI establishment, web connectivity, geospatial software availability, the unavailability of core spatial datasets, and institutional leadership. Thus, to enhance the development of NSDI in Pakistan, recommendations include bolstering financial and human resources, improving online geospatial presence, and fostering a long-term vision for NSDI. Full article
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<p>Scores of Pakistan’s NSDI readiness indices.</p>
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<p>Score of organizational index.</p>
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<p>Score of information index.</p>
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<p>Score of human resources index.</p>
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<p>Score of technology index.</p>
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<p>Score of financial resources index.</p>
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<p>Scores of Pakistan’s NSDI readiness indicators.</p>
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<p>Summarized results of 05 indicators of the state-of-play approach.</p>
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22 pages, 18715 KiB  
Article
Urban Vulnerability Assessment of Sea Level Rise in Singapore through the World Avatar
by Shin Zert Phua, Kok Foong Lee, Yi-Kai Tsai, Srishti Ganguly, Jingya Yan, Sebastian Mosbach, Trina Ng, Aurel Moise, Benjamin P. Horton and Markus Kraft
Appl. Sci. 2024, 14(17), 7815; https://doi.org/10.3390/app14177815 - 3 Sep 2024
Viewed by 2932
Abstract
This paper explores the application of The World Avatar (TWA) dynamic knowledge graph to connect isolated data and assess the impact of rising sea levels in Singapore. Current sea level rise vulnerability assessment tools are often regional, narrow in scope (e.g., economic or [...] Read more.
This paper explores the application of The World Avatar (TWA) dynamic knowledge graph to connect isolated data and assess the impact of rising sea levels in Singapore. Current sea level rise vulnerability assessment tools are often regional, narrow in scope (e.g., economic or cultural aspects only), and are inadequate in representing complex non-geospatial data consistently. We apply TWA to conduct a multi-perspective impact assessment of sea level rise in Singapore, evaluating vulnerable buildings, road networks, land plots, cultural sites, and populations. We introduce OntoSeaLevel, an ontology to describe sea level rise scenarios, and its impact on broader elements defined in other ontologies such as buildings (OntoBuiltEnv ontology), road networks (OpenStreetMap ontology), and land plots (Ontoplot and Ontozoning ontology). We deploy computational agents to synthesise data from government, industry, and other publicly accessible sources, enriching buildings with metadata such as property usage, estimated construction cost, number of floors, and gross floor area. An agent is applied to identify and instantiate the impacted sites using OntoSeaLevel. These sites include vulnerable buildings, land plots, cultural sites, and populations at risk. We showcase these sea level rise vulnerable elements in a unified visualisation, demonstrating TWA’s potential as a planning tool against sea level rise through vulnerability assessment, resource allocation, and integrated spatial planning. Full article
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<p>Outline of Sea Level Rise Ontology (i.e., blue), OpenStreetMap Ontology (i.e., red), Land Plot Ontology (i.e., green), Building Environment Ontology (i.e., yellow).</p>
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<p>UML sequence diagram summarising agent interactions.</p>
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<p>Impact overview of the SSP5-8.5 low-confidence scenario in the year 2150 at the 95th percentage quantile with a 6.0 m sea level rise. The figures designate the low-lying vulnerable areas, particularly on the southwestern side (Tuas) and the eastern side (Changi) of Singapore due to land reclamation after the SRTM elevation data were recorded. This result can be improved by using a more recent and accurate elevation model for TWA. (<b>a</b>) Singapore. (<b>b</b>) Vulnerable Singapore. (<b>c</b>) Vulnerable buildings. (<b>d</b>) Vulnerable road network breakdown by road types. (<b>e</b>) Vulnerable land plot with designated usages. (<b>f</b>) Vulnerable cultural sites. (<b>g</b>) Vulnerable population distribution.</p>
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<p>Vulnerable buildings based on SSP5-8.5 low-confidence scenario in the year 2150 with a 6.0 m sea level rise. (<b>a</b>) Vulnerable buildings by property usage. (<b>b</b>) Vulnerable buildings by estimated construction cost.</p>
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<p>TWA-VF user interface on a mocked vulnerable cultural site outlining the site’s key attributes such as name, description, and address in the side bar. The arrow highlights the cultural site selected (i.e., Serenity Gardens).</p>
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<p>The combination of population distribution, designated land use, building types, vulnerable area from sea level rise enables a multi-perspective visualisation, enhancing integrated analysis.</p>
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16 pages, 2260 KiB  
Article
Search Engine for Open Geospatial Consortium Web Services Improving Discoverability through Natural Language Processing-Based Processing and Ranking
by Elia Ferrari, Friedrich Striewski, Fiona Tiefenbacher, Pia Bereuter, David Oesch and Pasquale Di Donato
ISPRS Int. J. Geo-Inf. 2024, 13(4), 128; https://doi.org/10.3390/ijgi13040128 - 12 Apr 2024
Cited by 1 | Viewed by 1636
Abstract
The improvement of search engines for geospatial data on the World Wide Web has been a subject of research, particularly concerning the challenges in discovering and utilizing geospatial web services. Despite the establishment of standards by the Open Geospatial Consortium (OGC), the implementation [...] Read more.
The improvement of search engines for geospatial data on the World Wide Web has been a subject of research, particularly concerning the challenges in discovering and utilizing geospatial web services. Despite the establishment of standards by the Open Geospatial Consortium (OGC), the implementation of these services varies significantly among providers, leading to issues in dataset discoverability and usability. This paper presents a proof of concept for a search engine tailored to geospatial services in Switzerland. It addresses challenges such as scraping data from various OGC web service providers, enhancing metadata quality through Natural Language Processing, and optimizing search functionality and ranking methods. Semantic augmentation techniques are applied to enhance metadata completeness and quality, which are stored in a high-performance NoSQL database for efficient data retrieval. The results show improvements in dataset discoverability and search relevance, with NLP-extracted information contributing significantly to ranking accuracy. Overall, the GeoHarvester proof of concept demonstrates the feasibility of improving the discoverability and usability of geospatial web services through advanced search engine techniques. Full article
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<p>Frontend and backend conceptualization of the architecture used for the GeoHarvester PoC, including Scraper for OWS retrieval, NLP preprocessing, search engine logic in a first Docker container, and the Redis database in a second Docker container.</p>
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<p>Use of OWS metadata in Switzerland of the investigated service providers. (<b>a</b>) Percentage of keyword fields filled. (<b>b</b>) Percentage of abstract fields filled. (<b>c</b>) Average number of words in filled keyword fields.</p>
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<p>Steps of the query expansion process and resulting tokens for the search in the database for exact and similarity matches.</p>
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<p>Two-phase query times on Redis database.</p>
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<p>GeoHarvester user interface: (<b>a</b>) presentation of search results for the query &lt;bees&gt; in German, (<b>b</b>) drop-down menu with export and visualizations options of the same query.</p>
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17 pages, 16005 KiB  
Article
A Novel and Extensible Remote Sensing Collaboration Platform: Architecture Design and Prototype Implementation
by Wenqi Gao, Ninghua Chen, Jianyu Chen, Bowen Gao, Yaochen Xu, Xuhua Weng and Xinhao Jiang
ISPRS Int. J. Geo-Inf. 2024, 13(3), 83; https://doi.org/10.3390/ijgi13030083 - 8 Mar 2024
Cited by 3 | Viewed by 2063
Abstract
Geospatial data, especially remote sensing (RS) data, are of significant importance for public services and production activities. Expertise is critical in processing raw data, generating geospatial information, and acquiring domain knowledge and other remote sensing applications. However, existing geospatial service platforms are more [...] Read more.
Geospatial data, especially remote sensing (RS) data, are of significant importance for public services and production activities. Expertise is critical in processing raw data, generating geospatial information, and acquiring domain knowledge and other remote sensing applications. However, existing geospatial service platforms are more oriented towards the professional users in the implementation process and final application. Building appropriate geographic applications for non-professionals remains a challenge. In this study, a geospatial data service architecture is designed that links desktop geographic information system (GIS) software and cloud-based platforms to construct an efficient user collaboration platform. Based on the scalability of the platform, four web apps with different themes are developed. Data in the fields of ecology, oceanography, and geology are uploaded to the platform by the users. In this pilot phase, the gap between non-specialized users and experts is successfully bridged, demonstrating the platform’s powerful interactivity and visualization. The paper finally evaluates the capability of building spatial data infrastructures (SDI) based on GeoNode and discusses the current limitations. The support for three-dimensional data, the improvement of metadata creation and management, and the fostering of an open geo-community are the next steps. Full article
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<p>Overall architecture of the GDS and interaction diagram. Components identified with the green dashed line were proposed and developed based on GeoNode.</p>
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<p>The GUI of the GDS platform. (<b>a</b>) A slideshow-style homepage interface, where (<b>b</b>) the upper part consists of a menu bar and the entrance of the web apps, represented by a red rectangle. The lower part displays a goods shelf for the platform’s data.</p>
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<p>The GDS platform’s technology solution. The left part depicts the core platform built on the GeoNode framework, while the right part represents extensible web apps.</p>
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<p>Data collaboration sequence diagram for non-specialized users and experts. From left to right, the process for general users to find the required data within the platform is explained, as well as the interaction with experts.</p>
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<p>Existing data statistics chart on the GDS. (<b>a</b>) Number and proportion of ecological, geological, and oceanic data; (<b>b</b>) detailed statistics on oceanic data; (<b>c</b>) detailed statistics on ecological data; (<b>d</b>) detailed statistics on geological data.</p>
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<p>User collaboration case diagram. (<b>a</b>) Communication diagram featuring requests from general users and expert responses. (<b>b</b>) screenshot of the connection between QGIS and the GDS platform; this figure displays the data discovered on the GDS via a keyword search for yardangs (<b>c</b>) Yardangs-themed GeoStory; this picture showcases the yardangs landscape in six anticlinal areas (Hulushan, Luoyanshan, Chuanxingshan, etc.) through the GeoCarousel.</p>
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<p>The “NDI” web application’s GUI. On the left side, users can select spectral indices and other conditions, while the right side displays the resulting images on the map widget. The blue rectangle is the area of interest drawn by the user.</p>
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<p>The Qi’ao Island and its NDVI across different years. (<b>a</b>) The location of Qi’ao Island; (<b>b</b>–<b>d</b>) representations of the NDVI calculation results for the years 2016, 2019, and 2023, respectively.</p>
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<p>A dashboard with the theme of Qi’ao Island’s vegetation. It includes three types of widgets: a map, text, and chart.</p>
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<p>Fishery data processing steps and the main included data types.</p>
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<p>The “Fishery Visualization” web application’s GUI. This picture contains a loaded sea surface temperature layer.</p>
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<p>The “Research results” web application’s GUI. On the left side, users can configure search conditions, while the right side displays the query results on the map widget. The popMarker displays attribute information for the user’s query point, including existing research result name, author, and DOI.</p>
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15 pages, 3855 KiB  
Article
Advanced Techniques for Geospatial Referencing in Online Media Repositories
by Dominik Warch, Patrick Stellbauer and Pascal Neis
Future Internet 2024, 16(3), 87; https://doi.org/10.3390/fi16030087 - 1 Mar 2024
Cited by 1 | Viewed by 1934
Abstract
In the digital transformation era, video media libraries’ untapped potential is immense, restricted primarily by their non-machine-readable nature and basic search functionalities limited to standard metadata. This study presents a novel multimodal methodology that utilizes advances in artificial intelligence, including neural networks, computer [...] Read more.
In the digital transformation era, video media libraries’ untapped potential is immense, restricted primarily by their non-machine-readable nature and basic search functionalities limited to standard metadata. This study presents a novel multimodal methodology that utilizes advances in artificial intelligence, including neural networks, computer vision, and natural language processing, to extract and geocode geospatial references from videos. Leveraging the geospatial information from videos enables semantic searches, enhances search relevance, and allows for targeted advertising, particularly on mobile platforms. The methodology involves a comprehensive process, including data acquisition from ARD Mediathek, image and text analysis using advanced machine learning models, and audio and subtitle processing with state-of-the-art linguistic models. Despite challenges like model interpretability and the complexity of geospatial data extraction, this study’s findings indicate significant potential for advancing the precision of spatial data analysis within video content, promising to enrich media libraries with more navigable, contextually rich content. This advancement has implications for user engagement, targeted services, and broader urban planning and cultural heritage applications. Full article
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<p>Workflow diagram illustrating data acquisition from ARD Mediathek.</p>
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<p>Workflow diagram illustrating the analysis of the visible image.</p>
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<p>Workflow diagram illustrating the extraction of text from the visible image and performing NER and geocoding to retrieve coordinates.</p>
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<p>Workflow diagram illustrating the analysis of the audio source and subtitles to retrieve coordinates.</p>
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<p>Map excerpt of Dresden showing successfully identified location references in green (<b>a</b>) and unsuccessful (orange) location references and false positives (red) (<b>b</b>). The numbers represent the number of overlapping location references. Basemap: powered by Esri.</p>
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<p>Misidentification by the landmark recognition model, interpreting a person in a white hood (<b>a</b>) as the Swedish F 15 Flygmuseum (<b>b</b>), showing challenges with AI interpretability and training data biases. Image sources: (<b>a</b>) ARD Mediathek; (<b>b</b>) Wikimedia Commons.</p>
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<p>Examples in which OCR captured parts of the text (<b>a</b>) and where OCR was not able to recognize text due to large and partly concealed fonts (<b>b</b>). Image source: (<b>a</b>,<b>b</b>): ARD Mediathek.</p>
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19 pages, 12241 KiB  
Article
Geospatial Tool Development for the Management of Historical Hiking Trails—The Case of the Holy Site of Meteora
by Chryssy Potsiou, Charalabos Ioannidis, Sofia Soile, Argyro-Maria Boutsi, Regina Chliverou, Konstantinos Apostolopoulos, Maria Gkeli and Fotis Bourexis
Land 2023, 12(8), 1530; https://doi.org/10.3390/land12081530 - 2 Aug 2023
Cited by 3 | Viewed by 2194
Abstract
This paper presents a holistic guiding methodology for the development of a geospatial tool to be used for the documentation, planning, smart management and dissemination of a country’s network of historic hiking trails. To deal with the challenges and to ensure the sustainability [...] Read more.
This paper presents a holistic guiding methodology for the development of a geospatial tool to be used for the documentation, planning, smart management and dissemination of a country’s network of historic hiking trails. To deal with the challenges and to ensure the sustainability of a historic site, geospatial documentation merging authoritative and crowdsourced data and a WebGIS-based spatial analysis is necessary. Geospatial data collection should include professional field surveys, professional and crowdsourced photographic documentation and video recording of the existing historic walking/hiking trails. A geodatabase, structured using relational model technology, including vector spatial entities (feature classes), mosaics (raster) and tabulated data (geodatabase tables), should be developed on a commercial or open platform; in this case, the ArcGIS Pro is used. Entities with embedded descriptive information and metadata for the technical, legal, historical, and administrative context may then be created. An object-oriented data model is needed to connect spatial and descriptive information. Spatial and descriptive queries or correlations between attribute fields of spatial entities must be enabled for specialized information retrieval by either experts or users. Next, a web GIS application to present the developed geodatabase in a visually appealing and informative way is created. It should integrate 2D maps with built-in tools and should support advanced functionalities, such as: (i) pop-ups that display brief information and images about specific spots along the trails; (ii) dynamic visualization of the vertical profile of each trail; (iii) multimedia information about landmarks, natural features and scenic viewpoints. Finally, the tool includes a feedback service and continuous efficiency monitoring and assessment, and enables adjustments, if and where needed. The tool is tested and used for 10 historical walking/hiking trails of the archaeological and Holy Site of Meteora, Central Greece. This is a UNESCO World Heritage site. The network, with a total length of 35 km, leads to six monasteries, still active since the 12th century, passing by gigantic rocks and beautiful natural landscapes. The site is famous globally and the greater area is continuously overcrowded with visitors. The tool is anticipated to be used for the documentation and management of the whole walking/hiking historic trail network of Greece in the future. Full article
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<p>Workflow of the main processes and utilities of the proposed geospatial tool.</p>
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<p>The Core area and the Buffer zone of UNESCO World Heritage Site of Meteora, the Holy Site boundaries and the archaeological site (Zones A and B) on OpenstreetMap’s base-map.</p>
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<p>The 10 historic trails (M1–M10) of the proposed network in Meteora.</p>
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<p>Photographic documentation from various locations along the trails: (<b>a</b>) rock of Holy Spirit (Agio Pnevma); (<b>b</b>) cave hermitage of St. George Mandilas; (<b>c</b>) hermit caves; (<b>d</b>) rest area in the forest before reaching the abandoned Monastery of Ypapanti.</p>
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<p>The horizontal (<b>up</b>) and vertical (<b>bottom</b>) profile of the trail M9.</p>
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<p>(<b>Left</b>): The proposed positions of the marking signs along the trail M1: reception sign (green); position sign (cyan); warning sign (red); information sign (magenta); direction sign (orange). (<b>Right</b>): Basic characteristics of the trail M1.</p>
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<p>Vertical profile of the selected part of a trail.</p>
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<p>Presentation of multimedia material based on the individual sections of the route.</p>
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<p>Proposed structural and safety interventions and video file thumbnail, uploaded to YouTube.</p>
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17 pages, 307 KiB  
Article
Assessing the Status of National Spatial Data Infrastructure (NSDI) of Bangladesh
by Md. Mostafizur Rahman and György Szabó
ISPRS Int. J. Geo-Inf. 2023, 12(6), 236; https://doi.org/10.3390/ijgi12060236 - 7 Jun 2023
Cited by 3 | Viewed by 3209
Abstract
National spatial data infrastructure (NSDI) is an essential framework for managing and sharing geospatial data across different sectors and organizations. In Bangladesh, the development of NSDI is still in its early stages, and there are several challenges that need to be addressed to [...] Read more.
National spatial data infrastructure (NSDI) is an essential framework for managing and sharing geospatial data across different sectors and organizations. In Bangladesh, the development of NSDI is still in its early stages, and there are several challenges that need to be addressed to ensure its effective implementation. This paper provides a comprehensive assessment of the status of NSDI implementation in Bangladesh using Eelderink’s fourteen key variables. The paper examines the current state of NSDI implementation in Bangladesh, identifies strengths and weaknesses, and suggests recommendations for improvement. The findings suggest that while some progress has been made in establishing NSDI in Bangladesh, there are still significant challenges, such as limited funding; weak coordination among stakeholders; and a lack of skilled manpower, awareness, and capacity among users. To address these challenges, in this paper, we recommend several measures to improve the NSDI framework in Bangladesh. These include increasing funding support for NSDI development and maintenance, improving coordination among stakeholders through the establishment of a national coordinating body, enhancing awareness and capacity-building programs for NSDI users, and promoting the use of open data standards to improve data quality and interoperability. It is hoped that these recommendations will be taken into consideration by policymakers and other stakeholders to further enhance the development of NSDI in Bangladesh. Full article
21 pages, 4121 KiB  
Article
Provenance in GIServices: A Semantic Web Approach
by Zhaoyan Wu, Hao Li and Peng Yue
ISPRS Int. J. Geo-Inf. 2023, 12(3), 118; https://doi.org/10.3390/ijgi12030118 - 9 Mar 2023
Cited by 1 | Viewed by 2213
Abstract
Recent developments in Web Service and Semantic Web technologies have shown great promise for the automatic chaining of geographic information services (GIService), which can derive user-specific information and knowledge from large volumes of data in the distributed information infrastructure. In order for users [...] Read more.
Recent developments in Web Service and Semantic Web technologies have shown great promise for the automatic chaining of geographic information services (GIService), which can derive user-specific information and knowledge from large volumes of data in the distributed information infrastructure. In order for users to have an informed understanding of products generated automatically by distributed GIServices, provenance information must be provided to them. This paper describes a three-level conceptual view of provenance: the automatic capture of provenance in the semantic execution engine; the query and inference of provenance. The view adapts well to the three-phase procedure for automatic GIService composition and can increase understanding of the derivation history of geospatial data products. Provenance capture in the semantic execution engine fits well with the Semantic Web environment. Geospatial metadata is tracked during execution to augment provenance. A prototype system is implemented to illustrate the applicability of the approach. Full article
(This article belongs to the Special Issue GIS Software and Engineering for Big Data)
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<p>Landslide susceptibility case: (<b>a</b>) two computation models for landslide susceptibility index; (<b>b</b>) computation model for transforming DEM data into a form ready for analysis.</p>
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<p>A snippet of WSDL and OWL-S for the NDVI computation service.</p>
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<p>Semantic descriptions for GIService chains.</p>
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<p>The three-level view of provenance: (<b>a</b>) three phases of automatic GIService composition; (<b>b</b>) knowledge, service, and data provenance.</p>
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<p>Relations between the GIService provenance model and PROV.</p>
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<p>Extensions to the execution flow of semantic execution engine.</p>
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<p>A contextual path in supporting transformation between ontological instances.</p>
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<p>A snippet of provenance information.</p>
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<p>Provenance navigation in the Web browser.</p>
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<p>Inference using SWRL Rule in the Protégé.</p>
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17 pages, 2419 KiB  
Article
Supervised Machine Learning Enables Geospatial Microbial Provenance
by Chandrima Bhattacharya, Braden T. Tierney, Krista A. Ryon, Malay Bhattacharyya, Jaden J. A. Hastings, Srijani Basu, Bodhisatwa Bhattacharya, Debneel Bagchi, Somsubhro Mukherjee, Lu Wang, Elizabeth M. Henaff and Christopher E. Mason
Genes 2022, 13(10), 1914; https://doi.org/10.3390/genes13101914 - 21 Oct 2022
Cited by 4 | Viewed by 3641
Abstract
The recent increase in publicly available metagenomic datasets with geospatial metadata has made it possible to determine location-specific, microbial fingerprints from around the world. Such fingerprints can be useful for comparing microbial niches for environmental research, as well as for applications within forensic [...] Read more.
The recent increase in publicly available metagenomic datasets with geospatial metadata has made it possible to determine location-specific, microbial fingerprints from around the world. Such fingerprints can be useful for comparing microbial niches for environmental research, as well as for applications within forensic science and public health. To determine the regional specificity for environmental metagenomes, we examined 4305 shotgun-sequenced samples from the MetaSUB Consortium dataset—the most extensive public collection of urban microbiomes, spanning 60 different cities, 30 countries, and 6 continents. We were able to identify city-specific microbial fingerprints using supervised machine learning (SML) on the taxonomic classifications, and we also compared the performance of ten SML classifiers. We then further evaluated the five algorithms with the highest accuracy, with the city and continental accuracy ranging from 85–89% to 90–94%, respectively. Thereafter, we used these results to develop Cassandra, a random-forest-based classifier that identifies bioindicator species to aid in fingerprinting and can infer higher-order microbial interactions at each site. We further tested the Cassandra algorithm on the Tara Oceans dataset, the largest collection of marine-based microbial genomes, where it classified the oceanic sample locations with 83% accuracy. These results and code show the utility of SML methods and Cassandra to identify bioindicator species across both oceanic and urban environments, which can help guide ongoing efforts in biotracing, environmental monitoring, and microbial forensics (MF). Full article
(This article belongs to the Special Issue Application of Bioinformatics in Microbiome)
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<p>Working principle of Cassandra. The Random Forest-based method is designed to select bioindicator species for applications to microbial forensics. (<b>A</b>) Diagramatic schematic showing a conceptual interpretation of how Cassandra selects top bioindicator species for discriminating location from microbial data and geolocation and (<b>B</b>) Algorithmic Schema that Cassandra uses for reporting species of interest.</p>
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<p>Performance of the ML tools for predicting geolocation from MetaSUB dataset. Top 5 methods to detect microbial fingerprints of cities with high precision and recall for (<b>A</b>) city. (<b>B</b>) continents. Micro-averaging (used for un-balanced classes in NumPy) has been used for calculating the precision and recall values to account for class imbalances. (<b>C</b>) Gaussian noise (used to mimic metagenomic noises) for the best preprocessing method for each model to predict city (<b>D</b>) Training time required for city classification.</p>
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<p>Bioindicator Species and their association with other metrics. (<b>A</b>–<b>C</b>): The feature importance (weight assigned to bioindicator species) of the microbes as a bioindicator for cities, species prevalence (number of samples the species is present in), and species abundance (relative abundance of species across all samples) shows a linear relationship when plotted against one another (<b>D</b>) Boxplot depicting the abundance of the top 50 bioindicator microbial species for cities in the original MetaSUB data (<b>E</b>) Boxplot depicting the abundance of the top 50 bioindicator microbial species for the continent in the original MetaSUB data.</p>
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<p>Validation using the Tara Oceans dataset shows the presence of microbial fingerprints in the water sample: (<b>A</b>) Precision vs. Recall for the best model for prediction at each category to predict geolocation based on ocean region. We observe that irrespective of being the same dataset when we try classifying based on different domains, the best model/preprocessing differ, even if they are able to achieve similar accuracy. (<b>B</b>) Top 15 OTUs selected by Cassandra from Tara datasets along with their weight assigned by Cassandra.</p>
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24 pages, 1431 KiB  
Review
Context for Reproducibility and Replicability in Geospatial Unmanned Aircraft Systems
by Cassandra Howe and Jason A. Tullis
Remote Sens. 2022, 14(17), 4304; https://doi.org/10.3390/rs14174304 - 1 Sep 2022
Cited by 2 | Viewed by 2631
Abstract
Multiple scientific disciplines face a so-called crisis of reproducibility and replicability (R&R) in which the validity of methodologies is questioned due to an inability to confirm experimental results. Trust in information technology (IT)-intensive workflows within geographic information science (GIScience), remote sensing, and photogrammetry [...] Read more.
Multiple scientific disciplines face a so-called crisis of reproducibility and replicability (R&R) in which the validity of methodologies is questioned due to an inability to confirm experimental results. Trust in information technology (IT)-intensive workflows within geographic information science (GIScience), remote sensing, and photogrammetry depends on solutions to R&R challenges affecting multiple computationally driven disciplines. To date, there have only been very limited efforts to overcome R&R-related issues in remote sensing workflows in general, let alone those tied to unmanned aircraft systems (UAS) as a disruptive technology. This review identifies key barriers to, and suggests best practices for, R&R in geospatial UAS workflows as well as broader remote sensing applications. We examine both the relevance of R&R as well as existing support for R&R in remote sensing and photogrammetry assisted UAS workflows. Key barriers include: (1) awareness of time and resource requirements, (2) accessibility of provenance, metadata, and version control, (3) conceptualization of geographic problems, and (4) geographic variability between study areas. R&R in geospatial UAS applications can be facilitated through augmented access to provenance information for authorized stakeholders, and the establishment of R&R as an important aspect of UAS and related research design. Where ethically possible, future work should exemplify best practices for R&R research by publishing access to open data sets and workflows. Future work should also explore new avenues for access to source data, metadata, provenance, and methods to adapt principles of R&R according to geographic variability and stakeholder requirements. Full article
(This article belongs to the Special Issue Reproducibility and Replicability in Remote Sensing Workflows)
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<p>The charts above show: (<b>a</b>) the percentage of articles from review that published any sort of public access to source data or data produced from their experiments; (<b>b</b>) the percentage of articles reviewed that included access to a workflow or code necessary to conduct the experiment.</p>
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<p>Network of factors that play a key role in a UAS-based study or application.</p>
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<p>UAS photogrammetry case study including a replicated workflow represented using the PROV-DM data model [<a href="#B79-remotesensing-14-04304" class="html-bibr">79</a>]. This model provides a provenance structure that can facilitate R&amp;R of a UAS-based application. (The PROV data model is discussed in further depth in <a href="#sec5dot2-remotesensing-14-04304" class="html-sec">Section 5.2</a>).</p>
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<p>Land cover classification case study workflow represented by PROV-DM model relating each image and report to the software, source imagery, and hardware used to generate it.</p>
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22 pages, 1915 KiB  
Article
Geospatial Web Services Discovery through Semantic Annotation of WPS
by Meriem Sabrine Halilali, Eric Gouardères, Mauro Gaio and Florent Devin
ISPRS Int. J. Geo-Inf. 2022, 11(4), 254; https://doi.org/10.3390/ijgi11040254 - 12 Apr 2022
Cited by 6 | Viewed by 3125
Abstract
This paper presents an approach to GWS (GeospatialWeb Service) discovery through the semantic annotation of WPS (Web Processing Service) service descriptions. The rationale behind this work is that search engines that use appropriate semantic-based similarity measures in the matching process are more accurate [...] Read more.
This paper presents an approach to GWS (GeospatialWeb Service) discovery through the semantic annotation of WPS (Web Processing Service) service descriptions. The rationale behind this work is that search engines that use appropriate semantic-based similarity measures in the matching process are more accurate in terms of precision and recall than those based on syntactic matching alone. The lack of semantics in the description of services using a standard such as WPS prevents the use of such a matching process and is considered a limitation of GWS discovery. The GWS discovery approach presented is based on the consideration of semantics in the service description method and in the matching process. The description of services is based on a semantic lightweight meta-model instantiated in the WPS 2.0 standard, extending the description of the service through metadata tags. The matching process is performed in three steps (functionality matching step, I/O (Input/Output) matching step and non-functional matching step). Its core is a semantic similarity measure that combines logical and non-logical matching methods. Finally, the paper presents the results of an experiment applying the proposed discovery approach on a GWS corpus, showing promising results and the added value of the three-step matching process. Full article
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<p>UML class diagram representing the meta-model of geospatial web service description.</p>
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<p>UML Class diagram describing the abstract process model [<a href="#B3-ijgi-11-00254" class="html-bibr">3</a>].</p>
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<p>Wu and Palmer ontology example.</p>
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<p>SAWPS and GWSD architecture.</p>
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<p>How SAWPS allows us to encode the semantic annotation.</p>
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<p>Extract from the service ontology for the <span class="html-italic">R1</span> request example.</p>
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<p>Extract from the service ontology for the <span class="html-italic">R2</span> request example.</p>
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<p>Extract from the data ontology for the <span class="html-italic">R1</span> request example.</p>
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<p>Extract from the data ontology for the <span class="html-italic">R2</span> request example.</p>
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19 pages, 539 KiB  
Article
Approaches for the Clustering of Geographic Metadata and the Automatic Detection of Quasi-Spatial Dataset Series
by Javier Lacasta, Francisco Javier Lopez-Pellicer, Javier Zarazaga-Soria, Rubén Béjar and Javier Nogueras-Iso
ISPRS Int. J. Geo-Inf. 2022, 11(2), 87; https://doi.org/10.3390/ijgi11020087 - 26 Jan 2022
Cited by 6 | Viewed by 3453
Abstract
The discrete representation of resources in geospatial catalogues affects their information retrieval performance. The performance could be improved by using automatically generated clusters of related resources, which we name quasi-spatial dataset series. This work evaluates whether a clustering process can create quasi-spatial dataset [...] Read more.
The discrete representation of resources in geospatial catalogues affects their information retrieval performance. The performance could be improved by using automatically generated clusters of related resources, which we name quasi-spatial dataset series. This work evaluates whether a clustering process can create quasi-spatial dataset series using only textual information from metadata elements. We assess the combination of different kinds of text cleaning approaches, word and sentence-embeddings representations (Word2Vec, GloVe, FastText, ELMo, Sentence BERT, and Universal Sentence Encoder), and clustering techniques (K-Means, DBSCAN, OPTICS, and agglomerative clustering) for the task. The results demonstrate that combining word-embeddings representations with an agglomerative-based clustering creates better quasi-spatial dataset series than the other approaches. In addition, we have found that the ELMo representation with agglomerative clustering produces good results without any preprocessing step for text cleaning. Full article
(This article belongs to the Special Issue Geospatial Metadata)
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<p>Coverage of resources with LIDAR points information in the south of Spain.</p>
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<p>IR process using quasi-spatial dataset series.</p>
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<p>Clustering pipeline.</p>
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<p>An excerpt of an ISO 19115 metadata record extracted from the IDEE geospatial catalogue (translated to English from Spanish).</p>
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28 pages, 9174 KiB  
Article
RSIMS: Large-Scale Heterogeneous Remote Sensing Images Management System
by Xiaohua Zhou, Xuezhi Wang, Yuanchun Zhou, Qinghui Lin, Jianghua Zhao and Xianghai Meng
Remote Sens. 2021, 13(9), 1815; https://doi.org/10.3390/rs13091815 - 6 May 2021
Cited by 19 | Viewed by 3580
Abstract
With the remarkable development and progress of earth-observation techniques, remote sensing data keep growing rapidly and their volume has reached exabyte scale. However, it’s still a big challenge to manage and process such huge amounts of remote sensing data with complex and diverse [...] Read more.
With the remarkable development and progress of earth-observation techniques, remote sensing data keep growing rapidly and their volume has reached exabyte scale. However, it’s still a big challenge to manage and process such huge amounts of remote sensing data with complex and diverse structures. This paper designs and realizes a distributed storage system for large-scale remote sensing data storage, access, and retrieval, called RSIMS (remote sensing images management system), which is composed of three sub-modules: RSIAPI, RSIMeta, RSIData. Structured text metadata of different remote sensing images are all stored in RSIMeta based on a set of uniform models, and then indexed by the distributed multi-level Hilbert grids for high spatiotemporal retrieval performance. Unstructured binary image files are stored in RSIData, which provides large scalable storage capacity and efficient GDAL (Geospatial Data Abstraction Library) compatible I/O interfaces. Popular GIS software and tools (e.g., QGIS, ArcGIS, rasterio) can access data stored in RSIData directly. RSIAPI provides users a set of uniform interfaces for data access and retrieval, hiding the complex inner structures of RSIMS. The test results show that RSIMS can store and manage large amounts of remote sensing images from various sources with high and stable performance, and is easy to deploy and use. Full article
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<p>The overall architecture of RSIMS.</p>
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<p>Typical space-filling curves.</p>
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<p>Jump and Contiguity percentages comparison of Hilbert curve, Gray curve and Z-order curve.</p>
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<p>Basic global Hilbert grids.</p>
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<p>Structure of two-tier distributed spatial index.</p>
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<p>Basic shapes of Hilbert curve.</p>
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<p>Transition matrixes for Hilbert curves.</p>
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<p>Remote sensing image encoding and storage.</p>
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<p>Relationship of S, B and G.</p>
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<p>Grids generated from Algorithm 2 are not consistent with standard Hilbert grids.</p>
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<p>Process of grids merges according to Hilbert curve.</p>
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<p>Remote sensing images parallel query based on Hilbert grids.</p>
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<p>Problems of spatial query based on Hilbert grids.</p>
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<p>Overall metadata structure of ISO 19115-2.</p>
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<p>Mapping from Landsat property to ISO 19115 property.</p>
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<p>Overall storage schema of RSIMeta.</p>
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<p>Structure of Product table.</p>
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<p>Structure of Image table.</p>
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<p>The flow of multi-source heterogeneous remote sensing images integration.</p>
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<p>Detailed structure of /vsirados/ implementation.</p>
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<p>Deployment topology of the experimental RSIMS.</p>
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<p>Databases distribution based on Hilbert grids.</p>
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<p>Number of remote sensing images from different sources.</p>
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<p>Query regions with different sizes.</p>
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<p>Comparison of geospatial time consumed based on R1, R2, R3 and R4.</p>
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<p>Comparison of temporal query time consumed based on different time windows. Time windows of (<b>a</b>,<b>b</b>) are 10 days; Time windows of (<b>c</b>,<b>d</b>) is the natural months (from January to December).</p>
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<p>Performance comparison of RSIData and HDFS.</p>
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<p>The composite Landsat image of China mainland.</p>
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27 pages, 5960 KiB  
Article
Geospatial User Feedback: How to Raise Users’ Voices and Collectively Build Knowledge at the Same Time
by Alaitz Zabala, Joan Masó, Lucy Bastin, Gregory Giuliani and Xavier Pons
ISPRS Int. J. Geo-Inf. 2021, 10(3), 141; https://doi.org/10.3390/ijgi10030141 - 5 Mar 2021
Cited by 3 | Viewed by 3185
Abstract
Geospatial data is used not only to contemplate reality but also, in combination with analytical tools, to generate new information that requires interpretation. In this process data users gain knowledge about the data and its limitations (the user side of data quality) as [...] Read more.
Geospatial data is used not only to contemplate reality but also, in combination with analytical tools, to generate new information that requires interpretation. In this process data users gain knowledge about the data and its limitations (the user side of data quality) as well as knowledge on the status and evolutions of the studied phenomena. Knowledge can be annotations on top of the data, responses to questions, a careful description of the processes applied, a piece of software code or scripts applied to the data, usage reports or a complete scientific paper. This paper proposes an extension of the current Open Geospatial Consortium standard for Geospatial User Feedback to include the required knowledge elements, and a practical implementation. The system can incrementally collect, store, and communicate knowledge elements created by users of the data and keep them linked to the original data by means of permanent data identifiers. The system implements a Web API to manage feedback items as a frontend to a database. The paper demonstrates how a JavaScript widget accessing this API as a client can be easily integrated into existing data catalogues, such as the ECOPotential web service or the GEOEssential data catalogue, to collectively collect and share knowledge. Full article
(This article belongs to the Special Issue Geospatial Metadata)
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<p>UML class diagram describing the GUF_FeedbackItem in relation to GUF_FeedbackTarget and GUF_UserInformation, as described in the official pen Geospatial Consortium (OGC) Geospatial User Feedback (GUF) standard (adapted from UML diagrams used in [<a href="#B16-ijgi-10-00141" class="html-bibr">16</a>]). Orange boxes represent GUF classes, while white boxes come from ISO 19115.</p>
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<p>UML class diagram describing possible elements of GUF_FeedbackItem that allows for providing different aspects of user feedback, as described in the official OGC GUF standard (adapted from UML diagrams used in [<a href="#B16-ijgi-10-00141" class="html-bibr">16</a>]). Orange boxes represent GUF classes, while white boxes come from ISO 19115.</p>
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<p>UML class diagram describing the proposed extensions of the OGC GUF standard: 1/ new values in the GUF_MotivationCode (listed under “new”) and 2/ QCM_ReproducibleUsage which extends MD_Usage to provide code (and other elements) for reproducibility. Orange boxes represent GUF classes, the white box comes from ISO 19115, while the blue box depicts proposed new class.</p>
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<p>NiMMbus components and integration.</p>
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<p>Feedback item page (initial fragment) ready for user contribution when landing in the system from a connected portal (NEXTGEOSS catalogue in the example).</p>
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<p>List of resources page.</p>
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<p>Reproducible usage section in the Feedback item page.</p>
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<p>Widget usage in an example Web page (<a href="https://www.opengis.uab.cat/nimmbus/test_widget.htm" target="_blank">https://www.opengis.uab.cat/nimmbus/test_widget.htm</a> accessed on 4 March 2021): (<b>a</b>) Initial Web page with a button “Add/Review previous feedback items” that implements the widget (calling GUFShowFeedbackInHTMLDiv()) and fills in the white-background division below. The section which describes the resource (i.e., the information passed to the widget, highlighted in red in the first image) is blown up below. (<b>b</b>) Existing feedback items for the specified resource, retrieved when the widget is triggered by the button and used to fill in the dedicated.</p>
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<p>NEXTGEOSS portals integrating the NiMMbus system, in each of them the NiMMbus connection is highlighted in red: (<b>a</b>) NEXTGEOSS data hub, <a href="https://catalogue.nextgeoss.eu/" target="_blank">https://catalogue.nextgeoss.eu/</a> (accessed on 4 March 2021). (<b>b</b>) Biodiversity Monitoring and Mapping portal, <a href="http://nextgeoss.itc.utwente.nl/ebv/" target="_blank">http://nextgeoss.itc.utwente.nl/ebv/</a> (accessed on 4 March 2021). (<b>c</b>) Habitat Modelling portal, <a href="https://www.synbiosys.alterra.nl/nextgeoss/" target="_blank">https://www.synbiosys.alterra.nl/nextgeoss/</a> (accessed on 4 March 2021). (<b>d</b>) Disaster Risk Reduction pilot, <a href="http://nextgeoss.beyond-eocenter.eu/" target="_blank">http://nextgeoss.beyond-eocenter.eu/</a> (accessed on 4 March 2021).</p>
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<p>NEXTGEOSS portals integrating the NiMMbus system, in each of them the NiMMbus connection is highlighted in red: (<b>a</b>) NEXTGEOSS data hub, <a href="https://catalogue.nextgeoss.eu/" target="_blank">https://catalogue.nextgeoss.eu/</a> (accessed on 4 March 2021). (<b>b</b>) Biodiversity Monitoring and Mapping portal, <a href="http://nextgeoss.itc.utwente.nl/ebv/" target="_blank">http://nextgeoss.itc.utwente.nl/ebv/</a> (accessed on 4 March 2021). (<b>c</b>) Habitat Modelling portal, <a href="https://www.synbiosys.alterra.nl/nextgeoss/" target="_blank">https://www.synbiosys.alterra.nl/nextgeoss/</a> (accessed on 4 March 2021). (<b>d</b>) Disaster Risk Reduction pilot, <a href="http://nextgeoss.beyond-eocenter.eu/" target="_blank">http://nextgeoss.beyond-eocenter.eu/</a> (accessed on 4 March 2021).</p>
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<p>(<b>a</b>) ECOPotential map browser (<a href="http://maps.ecopotential-project.eu/" target="_blank">http://maps.ecopotential-project.eu/</a> accessed on 30 June 2020) showing the NDVI style of the Sentinel 2 L2A dataset on 19th February 2019 over Murgia Alta protected area. (<b>b</b>) Widget integration to give feedback of the Sentinel 2 L2A dataset: Selected area in (<b>a</b>) is blown up, showing the context menu for the dataset. (<b>c</b>) Widget integration to give feedback for the <span class="html-italic">NDVI</span> style within the same dataset.</p>
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<p>(<b>a</b>) Window to describe the definition of a new computed layer, i.e., Normalized Burn Ratio. (<b>b</b>) The computed layer added as a new style, with a particular <span class="html-italic">Share Style</span> context menu. (<b>c</b>) Menu option to retrieve the previous shared styles/typically by with other users and how they can be applied.</p>
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