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18 pages, 289 KiB  
Article
Surprised by Hope: Possibilities of Spiritual Experience in Victorian Lyric Poetry
by Denae Dyck
Religions 2025, 16(2), 255; https://doi.org/10.3390/rel16020255 - 18 Feb 2025
Abstract
This article reconsiders literature’s capacity to express and evoke spiritual experiences by turning to William James’s The Varieties of Religious Experience, especially his discussion of mysticism and his suggestion that poetry can bring about such states. James’s ideas are especially promising given [...] Read more.
This article reconsiders literature’s capacity to express and evoke spiritual experiences by turning to William James’s The Varieties of Religious Experience, especially his discussion of mysticism and his suggestion that poetry can bring about such states. James’s ideas are especially promising given recent developments in postsecular and postcritical scholarship that problematize a religious/secular divide and call into question a hermeneutics of suspicion. Bringing James into conversation with Paul Ricoeur, I aim to show how receptivity to spiritual experiences in literature might generate expansive models of both poetics and hermeneutics. To pursue these possibilities, my study analyzes three examples of Victorian lyric poems that probe the edges of wonder: Thomas Hardy’s “The Darkling Thrush”, Gerard Manley Hopkins’s “Nondum” and Dollie Radford’s “A Dream of ‘Dreams’”. These case studies strategically select work by writers of various belief or unbelief positions, highlighting the dynamism of the late nineteenth-century moment from which James’s writings emerged. I argue that this poetry facilitates a re-imagination of hope, beyond a faith/doubt dichotomy, as well as a re-framing of revelation, from proclamation to invitation. Building on insights from both James and Ricoeur, my discussion concludes by making the case for cultivating an interpretive disposition that does not guard against but opens toward poetry’s latent potential to take readers by surprise. Full article
(This article belongs to the Special Issue Imagining Ultimacy: Religious and Spiritual Experience in Literature)
13 pages, 2658 KiB  
Article
A Technique to Augment Arthroscopic Bankart Repair With or Without a Metal Block: A Comparison
by Paul Vedrenne, Mohamad K. Moussa, Kévin Picard, Thomas Bauer and Alexandre Hardy
J. Clin. Med. 2025, 14(2), 616; https://doi.org/10.3390/jcm14020616 - 18 Jan 2025
Viewed by 324
Abstract
Introduction: Arthroscopic Bankart repair (ABR) is associated with an increased failure rate over time. The Recenter implant, a metal block, is designed to reinforce capsulolabral repair. The aim of this study was to evaluate whether the addition of the Recenter implant to ABR [...] Read more.
Introduction: Arthroscopic Bankart repair (ABR) is associated with an increased failure rate over time. The Recenter implant, a metal block, is designed to reinforce capsulolabral repair. The aim of this study was to evaluate whether the addition of the Recenter implant to ABR reduces the rate of recurrence in patients with glenohumeral anterior instability. Materials and Methods: This was a retrospective, multicentric case–control study focusing on patients surgically treated for anterior shoulder instability from February 2012 to November 2019. This study compared patients undergoing ABR augmented with the “Recenter” implant (augmented ABR group) against those receiving traditional ABR. Primary outcomes measured included recurrence rates. Secondary outcome measures included functional scores (Walch–Duplay and the subjective shoulder test [SST], the auto Rowe score, satisfaction, pain, and the presence or absence of subjective subluxation and apprehension), return to sports, the range of motion, as well as other complications. Results: Thirty-two patients with augmented ABR were compared to forty-eight patients in the traditional ABR group, with mean follow-up periods of 5.2 ± 1.3 years and 6.1 ± 1.5 years, respectively. Three patients (9.4%) experienced recurrence in the “Recenter” group, versus eight (16.7%) in the other group (p > 0.05). The Walch–Duplay score was 70.2 ± 8.2 in the “Recenter” group and 64.2 ± 8 in the control group (p > 0.05). The SST score out of 100 was, respectively, 84.6 ± 6 and 81.5 ± 5.5 (p = 0.05). There were no early complications in the implant group. No statistically significant differences were observed between the two groups for the other outcomes. Conclusions: ABR safely restores shoulder stability in selected patients with subcritical glenoid bone deficiency. However, the addition of the Recenter metal implant did not improve outcomes compared to traditional Bankart repair and introduced presumed significant surgical time, technical challenges, and additional costs. Full article
(This article belongs to the Special Issue Current Trends and Innovations in Arthroscopic Shoulder Surgery)
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<p>Prosthetic block: the Recenter.</p>
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<p>Participant flowchart.</p>
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<p>Specific arthroscopic guide.</p>
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<p>Recenter mounted with the two knotless TightRopes.</p>
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<p>Recenter in position before and after Bankart repair. A <span class="html-italic">Recenter</span> implanted, B Anchor fixing the labrum, C Final aspect.</p>
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<p>Position of the Recenter (<b>a</b>) flush, (<b>b</b>) congruent and (<b>c</b>) lateral.</p>
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<p>α angle of the Recenter.</p>
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18 pages, 3903 KiB  
Article
Differential LRRK2 Signalling and Gene Expression in WT-LRRK2 and G2019S-LRRK2 Mouse Microglia Treated with Zymosan and MLi2
by Iqra Nazish, Adamantios Mamais, Anna Mallach, Conceicao Bettencourt, Alice Kaganovich, Thomas Warner, John Hardy, Patrick A. Lewis, Jennifer Pocock, Mark R. Cookson and Rina Bandopadhyay
Cells 2024, 13(1), 53; https://doi.org/10.3390/cells13010053 - 26 Dec 2023
Viewed by 3267
Abstract
Mutations in the leucine-rich repeat kinase 2 (LRRK2) gene cause autosomal dominant Parkinson’s disease (PD), with the most common causative mutation being the LRRK2 p.G2019S within the kinase domain. LRRK2 protein is highly expressed in the human brain and also in [...] Read more.
Mutations in the leucine-rich repeat kinase 2 (LRRK2) gene cause autosomal dominant Parkinson’s disease (PD), with the most common causative mutation being the LRRK2 p.G2019S within the kinase domain. LRRK2 protein is highly expressed in the human brain and also in the periphery, and high expression of dominant PD genes in immune cells suggests involvement of microglia and macrophages in inflammation related to PD. LRRK2 is known to respond to extracellular signalling including TLR4, resulting in alterations in gene expression, with the response to TLR2 signalling through zymosan being less known. Here, we investigated the effects of zymosan, a TLR2 agonist and the potent and specific LRRK2 kinase inhibitor MLi-2 on gene expression in microglia from LRRK2-WT and LRRK2 p.G2019S knock-in mice by RNA-sequencing analysis. We observed both overlapping and distinct zymosan and MLi-2 mediated gene expression profiles in microglia. At least two candidate genome-wide association (GWAS) hits for PD, CathepsinB (Ctsb) and Glycoprotein-nmb (Gpnmb), were notably downregulated by zymosan treatment. Genes involved in inflammatory response and nervous system development were up and downregulated, respectively, with zymosan treatment, while MLi-2 treatment particularly exhibited upregulated genes for ion transmembrane transport regulation. Furthermore, we observed that the top twenty most significantly differentially expressed genes in LRRK2 p.G2019S microglia show enriched biological processes in iron transport and response to oxidative stress. Overall, these results suggest that microglial LRRK2 may contribute to PD pathogenesis through altered inflammatory pathways. Our findings should encourage future investigations of these putative avenues in the context of PD pathogenesis. Full article
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<p>LRRK2 phosphorylation evoked by zymosan is inhibited with MLi-2 treatment in wild-type and G2019S-LRRK2 microglia. Wild-type and G2019S-LRRK2 were treated with 1 µM MLi-2 and 200 µg/mL zymosan for 4 h and 24 h. Fluorescent immunoblots and corresponding quantifications are shown for (<b>A</b>) 4 h and (<b>B</b>) 24 h. Blots were probed with LRRK2 phosphorylation antibody pSer935 and total LRRK2. Controls contain media only. Values represent the mean ± S.E.M. of two independent experiments (with internal triplicates in each experiment). The individual replicates are biologically independent, resulting in a sample size of <span class="html-italic">n</span> = 6. Data were analysed with a one-way ANOVA with Tukey’s post hoc test. * and ** and *** signify <span class="html-italic">p</span> &lt; 0.05, 0.01 and 0.001, respectively. Colours for graphs indicate the following: blue: control; green: zymosan; red: MLi-2; dark red: zymosan + MLi2 treatments. Ctrl: control; Zym/Z: zymosan; M: MLi-2.</p>
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<p>RNA-Seq profiling showing the first two principal components of wild-type and G2019S-LRRK2 microglia after zymosan and MLi-2 stimulation. We used the first two principal components, PC1 and PC2, of all samples in the study. Data are from two independent experiments. Treatments with zymosan and MLi-2 and genotype (wild-type and G2019S-LRRK2). Note that samples are separated largely by treatment, and to a lesser extent by genotype.</p>
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<p>Differential gene expression in wild-type and G2019S-LRRK2 microglia after zymosan (200 μm) and MLi-2 (1 μm) stimulation for 24 h, (<b>A</b>) Hierarchical clustering and heatmap for the variance-stabilized expression of all genes detected in cells. Colours in the heatmap represent the Euclidean distance between samples in a pairwise manner, scaled as shown on the upper right yellow-blue scale. At the side of the heatmap is a colour representation of the model variables, which included two biological variables, and treatments with zymosan and MLi-2 and genotype (wild-type and G2019S-LRRK2) in two independent experiments with two biological replicates. Note that samples are separated largely by treatment and to a lesser extent by genotype. (<b>B</b>) Heatmap for the top twenty most statistically significant genes as examples of differential expression. Each gene on the right side of each heatmap is coloured according to Z (normalized standard deviations from the mean) for expression relative to the overall mean expression for that gene, and samples are listed below each heatmap. Ctrl: control; Zymo: zymosan.</p>
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<p>Volcano plots showing significantly differentiated genes with zymosan treatment in G2019S-LRRK2 (<b>A</b>) and in the wild type (<b>B</b>). Each point represents a significantly differentiated gene. Dark blue colour depicts genes which passed the thresholds for 2-Log fold change, with the upper-right-hand quadrant showing upregulated genes and the upper-left-hand quadrant showing downregulated genes. The top twenty genes with the highest mean expression across all samples are shown in boxes in these volcano plots.</p>
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<p>Protein interaction maps generated with Hippie software (version 2.2), showing the interaction of Ctsb proteins (<b>A</b>) and Gpnmb proteins (<b>B</b>) with other interacting proteins.</p>
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<p>GO enrichment analysis of differentially expressed genes in zymosan-treated wild-type and G2019S-LRRK2 microglia. GO (<b>A</b>,<b>B</b>) biological process and (<b>C</b>,<b>D</b>) cellular component enrichment analyses of (<b>A</b>,<b>C</b>) upregulated proteins and (<b>B</b>,<b>D</b>) downregulated proteins in zymosan-treated wild-type and G2019S-LRRK2 microglial cells were performed using the FunRich functional enrichment analysis tool. Significantly enriched GO terms are shown with Benjamini–Hochberg and Bonferroni-corrected <span class="html-italic">p</span>-values. Statistical significance was taken at <span class="html-italic">p</span> &lt; 0.05.</p>
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<p>GO enrichment analysis of differentially expressed genes in MLi2-treated wild-type and G2019S-LRRK2 microglia. GO (<b>A</b>,<b>B</b>) biological process and (<b>C</b>) cellular component enrichment analyses of (<b>A</b>) upregulated proteins and (<b>B</b>,<b>C</b>) downregulated proteins in MLi2-treated wild-type and G2019S-LRRK2 microglial cells were performed using the FunRich functional enrichment analysis tool. There were no significantly enriched GO terms with upregulated proteins in MLi2-treated wild-type and G2019S-LRRK2 microglial cells in the data, hence no data for that are shown. Significantly enriched GO terms are shown with Benjamini–Hochberg and Bonferroni-corrected <span class="html-italic">p</span>-values. Statistical significance was taken at <span class="html-italic">p</span> &lt; 0.05.</p>
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<p>GO enrichment analysis of the top twenty most statistically significant genes with the highest mean expression across all treatments and genotype. GO (<b>A</b>) biological process and (<b>B</b>) cellular component enrichment analyses of top twenty most statistically significant differentially expressed genes across all samples (from <a href="#cells-13-00053-f005" class="html-fig">Figure 5</a>) were performed using the FunRich functional enrichment analysis tool. Significantly enriched GO terms are shown with Benjamini–Hochberg and Bonferroni-corrected <span class="html-italic">p</span>-values. Statistical significance was taken at <span class="html-italic">p</span> &lt; 0.05.</p>
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12 pages, 2458 KiB  
Article
The Whole-Exome Sequencing of a Cohort of 19 Families with Adolescent Idiopathic Scoliosis (AIS): Candidate Pathways
by Laura Marie-Hardy, Thomas Courtin, Hugues Pascal-Moussellard, Serge Zakine and Alexis Brice
Genes 2023, 14(11), 2094; https://doi.org/10.3390/genes14112094 - 17 Nov 2023
Cited by 1 | Viewed by 1771
Abstract
A significant genetic involvement has been known for decades to exist in adolescent idiopathic scoliosis (AIS), a spine deformity affecting 1–3% of the world population. However, though biomechanical and endocrinological theories have emerged, no clear pathophysiological explanation has been found. Data from the [...] Read more.
A significant genetic involvement has been known for decades to exist in adolescent idiopathic scoliosis (AIS), a spine deformity affecting 1–3% of the world population. However, though biomechanical and endocrinological theories have emerged, no clear pathophysiological explanation has been found. Data from the whole-exome sequencing performed on 113 individuals in 19 multi-generational families with AIS have been filtered and analyzed via interaction pathways and functional category analysis (Varaft, Bingo and Panther). The subsequent list of 2566 variants has been compared to the variants already described in the literature, with an 18% match rate. The familial analysis in two families reveals mutations in the BICD2 gene, supporting the involvement of the muscular system in AIS etiology. The cellular component analysis revealed significant enrichment in myosin-related and neuronal activity-related categories. All together, these results reinforce the suspected role of the neuronal and muscular systems, highlighting the calmodulin pathway and suggesting a role of DNA-binding activities in AIS physiopathology. Full article
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<p>Pedigrees of the 19 families of the SCOGEN cohort. The pedigrees were created on CeGat Software. Patients with confirmed AIS are represented in black and healthy relatives in white.</p>
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<p>Pie-chart representing the repartition of category types of the variants found in the SCOGEN list. SNV: Single nucleotide variation. Most of the variants (58%) were missense variants and frameshift insertions (18%).</p>
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<p>BiNGO visualization of molecular function GO terms in the SCOGEN list of genes. The most significant GO terms are represented in orange (see legend bar with gradient of color according to significance). The size of the node is proportional to the number of genes identified in the SCOGEN list related to this GO term. For easier visualization, the nodes have been pooled into four categories: binding (which is predominantly represented), receptor and kinase, hydrolase and phosphatase, and channel and transporter.</p>
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<p>Pedigrees of the SCOGEN017 and SCOGEN018 families regarding mutation status for the two variants in BICD2. In the SCOGEN017 family, patient I.1 had a 35° curve, treated by brace. Patients II.2 and II.4 underwent surgical correction of the scoliosis. Patient II.1 and II.4 were treated by bracing with curves of 20 and 30°, respectively. In the SCOGEN018 family, patients I.1 and II.2 were treated by bracing for thoracic curves of 25 and 35°. All main curves in both families were right thoracic curves, with an age of onset of the scoliosis between 11–15 years old.</p>
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14 pages, 291 KiB  
Article
Transfigurations of the Commonplace: Hirst’s Tumbler, Joyce’s Tap
by Judith Woolf
Humanities 2023, 12(3), 46; https://doi.org/10.3390/h12030046 - 7 Jun 2023
Cited by 1 | Viewed by 1336
Abstract
One reason why the concept of the quotidian has proved elusive to critics of literature and the visual arts is that the commonplace in art and literature so often refuses to remain untransfigured, not least because of its power to confront us with [...] Read more.
One reason why the concept of the quotidian has proved elusive to critics of literature and the visual arts is that the commonplace in art and literature so often refuses to remain untransfigured, not least because of its power to confront us with the material detritus with which we surround ourselves and which we will eventually join. It is not surprising, then, that contemporary artists share a preoccupation with finding both mortality and transcendence in what John Wilmot, Earl of Rochester called “the lumber of the world.” In this paper, I shall consider how an early Damien Hirst mini-installation, consisting of a glass tumbler of water and a ping-pong ball, takes its only partly mocking place in a still life tradition going back to Roman xenia and seventeenth-century vanitas paintings, and to a related literary tradition typified by Thomas Hardy’s Under the Waterfall and James Joyce’s great prose aria to water all its forms in the Ithaca section of Ulysses. Full article
21 pages, 14365 KiB  
Article
Applying Floodplain Inundation Modeling to Estimate Suitable Spawning Habitat and Recruitment Success for Alligator Gar in the Guadalupe River, Texas
by Kimberly M. Meitzen, Clinton R. Robertson, Jennifer L. Jensen, Daniel J. Daugherty, Thomas B. Hardy and Kevin B. Mayes
Hydrology 2023, 10(6), 123; https://doi.org/10.3390/hydrology10060123 - 31 May 2023
Cited by 4 | Viewed by 2353
Abstract
We developed a floodplain inundation model to extract specific flood extent and depth parameters and combined these with vegetation land cover and historic flow data to quantify spatial habitat suitability and temporal hydrologic metrics that support Alligator Gar Atractosteus spatula spawning within a [...] Read more.
We developed a floodplain inundation model to extract specific flood extent and depth parameters and combined these with vegetation land cover and historic flow data to quantify spatial habitat suitability and temporal hydrologic metrics that support Alligator Gar Atractosteus spatula spawning within a 257 km segment of the lower Guadalupe River, Texas, USA. We modeled nine flows across a range of flood frequency recurrence intervals from 257 m3s−1 to ~4997 m3s−1 and estimated the availability of suitable spawning water depths (0.2 to 2 m) and lateral connectedness between the river and suitable floodplain landcover types. We estimated the ages via otoliths of 95 Alligator Gar collected in the reach to determine the year that they were recruited into the system. We analyzed a total of 30 Indicators of Hydrologic Alteration flow metrics to examine how the spatially derived suitable habitats related to the temporal aspects of flow occurrence during the spawning season for the period of flow record April–July (1935–2020) and to the years spanning the recruitment data of the Alligator Gar (1981–2010). A non-linear relationship existed between suitable spawning habitat area and the flow regime, with the most habitat availability corresponding to the 10–20-year flood recurrence interval frequency with peak flows of 2057–3108 m3s−1, respectively. The Alligator Gar recruitment data indicated that six years provided high recruitment, which correlated with peak flows of ~5-year frequency with an available spawning area of ~9000 Ha, moderate recruitment years related to peak flows with ~3-year frequency with an available spawning area of 6000 Ha, and low recruitment years where spawning was likely to occur at least every other year with at least 2500 Ha of available spawning area. The results of this model support the development of legislatively mandated environmental flow standards for the Guadalupe River Basin, inform field-based efforts for collecting empirical and observational data on the species’ reproduction, and provide spatial and temporal information for designing conservation strategies for Alligator Gar. Full article
(This article belongs to the Special Issue Flood Inundation Mapping in Hydrological Systems)
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<p>Guadalupe River Basin with lower study area designated by black oval and stream flow gage locations ordered and identified from upstream to downstream. The inset digital elevation model (DEM) provides context for floodplain topography.</p>
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<p>Geometry layers created for the four modeled reaches with bounding stream flow data.</p>
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<p>Flood inundation extent and depth maps for nine modeled events. The inset box overlaps the area of NWS flood mapping used in the validation and error analysis.</p>
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<p>Suitable spawning habitat for flood depth and vegetation criteria for Alligator Gar relative to discharge.</p>
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<p>Habitat suitability maps for the nine discharges. Dark green indicates suitable for land cover and depth, blue indicates suitable depth and unsuitable land cover, light green indicates suitable for land cover and unsuitable for depth, and tan indicates unsuitable for depth and land cover.</p>
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<p>Principal component analysis of hydrologic variables by year. PC 1 explains 53.23% of the variance, and PC 2 explains 15.57% of the variance. Filled in circles are years of high Alligator Gar recruitment. The two years 2001 and 1996 are dissimilar to other high Alligator Gar recruitment years and are most likely mis-aged fish and were excluded from further analysis.</p>
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14 pages, 1784 KiB  
Article
Sheep Preference for Fresh Leaf and Stem of Seven Accessions of Tedera Was Not Influenced by Prior Grazing Experience and Wilting Made No Difference
by Justin Hardy, Chris Oldham, Phil Vercoe, Dean Thomas, John Milton, Daniel Real, Andrew van Burgel and Eric Dobbe
Agronomy 2023, 13(1), 246; https://doi.org/10.3390/agronomy13010246 - 13 Jan 2023
Cited by 1 | Viewed by 1683
Abstract
Tedera is a valuable high-quality forage for sheep during summer–autumn. There is evidence that prior grazing experience of novel forages influences preference and haymaking of tedera improves preference by goats. In the first experiment, it was hypothesised that the voluntary feed intake (VFI) [...] Read more.
Tedera is a valuable high-quality forage for sheep during summer–autumn. There is evidence that prior grazing experience of novel forages influences preference and haymaking of tedera improves preference by goats. In the first experiment, it was hypothesised that the voluntary feed intake (VFI) of fresh leaves and stems of tedera by sheep would be greater for experienced vs. naïve sheep. In the second experiment, it was hypothesised that the VFI of naïve sheep fed wilted leaves and stems of tedera would be greater than fresh leaves and stems of tedera. To test these hypotheses, adult Merino sheep were fed seven accessions of tedera, in two outdoor pen feeding experiments conducted consecutively. Each of six pens had 14 feeders, two for each accession, and two sheep. In experiment 1, three pens had sheep that had previously grazed tedera (experienced) and three pens had sheep with no experience (naïve), and all were fed fresh leaves and stems of the seven tedera accessions. Experiment 2 involved only naïve sheep, with three pens fed fresh leaves and stems and three pens fed wilted leaves and stems of the seven tedera accessions. Preference was measured each day for six days in experiment 1; and for five days in experiment 2 by calculating the average differences of feed offered and feed remaining from the feeders. In experiment 1, experienced sheep showed no difference in preference (average percentage eaten) in the first hour of each day compared to naïve sheep (70% vs. 56% DM intake (kg), p = 0.27). There was an increase in the amount eaten from the first to the last day for both groups, except for the intake of one accession that was reduced for the experienced sheep. In experiment 2, there was no statistical difference in preference between accessions. However, when the average percentage eaten by the experienced and naïve groups are combined, they are strongly correlated, with significant differences between accessions. Sheep did not eat more wilted tedera compared to fresh, which did not support our hypothesis. The only differences we found in sheep preference for tedera accessions occurred in experiment 1. Further studies to investigate seasonal differences in sheep preference between accessions is required and increased replication is needed to better determine the effect of prior grazing experience on the preference for tedera accessions. Full article
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<p>Schematic of the pen feeding experiment illustrating the layout of the six pens, the central tent for recording measurements and proximity to the established tedera.</p>
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<p>Schematic of one of the six 3 m × 3 m outdoor feeding pens illustrating the layout of the 14 feeders with indicative positions of the seven tedera accessions.</p>
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<p>(<b>A</b>) 800 g of fresh tedera from a single plant before harvesting; (<b>B</b>) the same tedera plant following harvesting; (<b>C</b>) harvesting length (50–70 mm); and (<b>D</b>) fresh tedera sample.</p>
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<p>The average percentage of the tedera offered that was eaten in the first hour by both the experienced (diamond) and the naïve (circle) sheep over the six days of experiment 1.</p>
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<p>The combined average percentage eaten in the first hour of six tedera accessions (circles) offered in contrast with the average percentage eaten of tedera accession T4 (diamonds), by the experienced sheep over the six days of experiment 1. Note: Error bars are standard errors.</p>
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<p>The average percentage of the tedera offered that was eaten in the first hour by naive sheep fed fresh (diamond) and wilted (circle) tedera over four days of experiment 2. Note: Error bars are standard errors.</p>
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19 pages, 1718 KiB  
Review
Oligonucleotide Therapeutics for Age-Related Musculoskeletal Disorders: Successes and Challenges
by Thomas A. Nicholson, Michael Sagmeister, Susanne N. Wijesinghe, Hussein Farah, Rowan S. Hardy and Simon W. Jones
Pharmaceutics 2023, 15(1), 237; https://doi.org/10.3390/pharmaceutics15010237 - 10 Jan 2023
Cited by 3 | Viewed by 3174
Abstract
Age-related disorders of the musculoskeletal system including sarcopenia, osteoporosis and arthritis represent some of the most common chronic conditions worldwide, for which there remains a great clinical need to develop safer and more efficacious pharmacological treatments. Collectively, these conditions involve multiple tissues, including [...] Read more.
Age-related disorders of the musculoskeletal system including sarcopenia, osteoporosis and arthritis represent some of the most common chronic conditions worldwide, for which there remains a great clinical need to develop safer and more efficacious pharmacological treatments. Collectively, these conditions involve multiple tissues, including skeletal muscle, bone, articular cartilage and the synovium within the joint lining. In this review, we discuss the potential for oligonucleotide therapies to combat the unmet clinical need in musculoskeletal disorders by evaluating the successes of oligonucleotides to modify candidate pathological gene targets and cellular processes in relevant tissues and cells of the musculoskeletal system. Further, we discuss the challenges that remain for the clinical development of oligonucleotides therapies for musculoskeletal disorders and evaluate some of the current approaches to overcome these. Full article
(This article belongs to the Special Issue Recent Trends in Oligonucleotide Based Therapies)
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<p>Oligonucleotides targeting pathological cellular processes in the tissues of the musculosketal system. ADAMTS 4, 5; a disintegrin and metalloproteinase with thrombospondin motifs 4, 5. BMP; bone morphogenic protein. DKK1; Dickkopf-elated protein 1. FOXC1; forkhead box C1. MMP; matrix metalloproteinase. OPG; osteoprotegerin. RANKL; receptor activator of nuclear factor kappa-Β ligand. TNF-α; tumour necrosis factor. Gal-9; Galectin9. MALAT1; Metastasis Associated Lung Adenocarcinoma Transcript 1. GLS1; Glutaminase-1. OBRL; Long leptin receptor. PAI-1; plasminogen activator inhibitor-1. TFEB; transcription factor EB. IRS-1; insulin receptor substrate-1. SIRP-α; signal regulatory protein alpha. C/EBPβ; CCAAT/enhancer-binding protein beta.</p>
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14 pages, 369 KiB  
Review
D-dimer Testing in Pulmonary Embolism with a Focus on Potential Pitfalls: A Narrative Review
by Loris Wauthier, Julien Favresse, Michaël Hardy, Jonathan Douxfils, Grégoire Le Gal, Pierre-Marie Roy, Nick van Es, Cihan Ay, Hugo ten Cate, Thierry Vander Borght, Michaël V. Dupont, Thomas Lecompte, Giuseppe Lippi and François Mullier
Diagnostics 2022, 12(11), 2770; https://doi.org/10.3390/diagnostics12112770 - 12 Nov 2022
Cited by 3 | Viewed by 5760
Abstract
D-dimer is a multifaceted biomarker of concomitant activation of coagulation and fibrinolysis, which is routinely used for ruling out pulmonary embolism (PE) and/or deep vein thrombosis (DVT) combined with a clinical pretest probability assessment. The intended use of the tests depends largely on [...] Read more.
D-dimer is a multifaceted biomarker of concomitant activation of coagulation and fibrinolysis, which is routinely used for ruling out pulmonary embolism (PE) and/or deep vein thrombosis (DVT) combined with a clinical pretest probability assessment. The intended use of the tests depends largely on the assay used, and local guidance should be applied. D-dimer testing may suffer from diagnostic errors occurring throughout the pre-analytical, analytical, and post-analytical phases of the testing process. This review aims to provide an overview of D-dimer testing and its value in diagnosing PE and discusses the variables that may impact the quality of its laboratory assessment. Full article
(This article belongs to the Section Pathology and Molecular Diagnostics)
17 pages, 1278 KiB  
Article
Validation of Three MicroScan® Antimicrobial Susceptibility Testing Plates Designed for Low-Resource Settings
by Jean-Baptiste Ronat, Saoussen Oueslati, Alessandra Natale, Thomas Kesteman, Wael Elamin, Céline Langendorf, Liselotte Hardy, Olivier Vandenberg and Thierry Naas
Diagnostics 2022, 12(9), 2106; https://doi.org/10.3390/diagnostics12092106 - 30 Aug 2022
Cited by 3 | Viewed by 3865
Abstract
Easy and robust antimicrobial susceptibility testing (AST) methods are essential in clinical bacteriology laboratories (CBL) in low-resource settings (LRS). We evaluated the Beckman Coulter MicroScan lyophilized broth microdilution panel designed to support Médecins Sans Frontières (MSF) CBL activity in difficult settings, in particular [...] Read more.
Easy and robust antimicrobial susceptibility testing (AST) methods are essential in clinical bacteriology laboratories (CBL) in low-resource settings (LRS). We evaluated the Beckman Coulter MicroScan lyophilized broth microdilution panel designed to support Médecins Sans Frontières (MSF) CBL activity in difficult settings, in particular with the Mini-Lab. We evaluated the custom-designed MSF MicroScan Gram-pos microplate (MICPOS1) for Staphylococcus and Enterococcus species, MSF MicroScan Gram-neg microplate (MICNEG1) for Gram-negative bacilli, and MSF MicroScan Fastidious microplate (MICFAST1) for Streptococci and Haemophilus species using 387 isolates from routine CBLs from LRS against the reference methods. Results showed that, for all selected antibiotics on the three panels, the proportion of the category agreement was above 90% and the proportion of major and very major errors was below 3%, as per ISO standards. The use of the Prompt inoculation system was found to increase the MIC and the major error rate for some antibiotics when testing Staphylococci. The readability of the manufacturer’s user manual was considered challenging for low-skilled staff. The inoculations and readings of the panels were estimated as easy to use. In conclusion, the three MSF MicroScan MIC panels performed well against clinical isolates from LRS and provided a convenient, robust, and standardized AST method for use in CBL in LRS. Full article
(This article belongs to the Section Diagnostic Microbiology and Infectious Disease)
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<p>Example of the three MSF MicroScan MIC panels. (<b>a</b>) MicroScan MSF dried overnight Gram-positive panel, (<b>b</b>) MicroScan MSF dried overnight Gram-negative panel, (<b>c</b>) MSF dried overnight fastidious panel.</p>
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<p>Prototype of the microplate viewer box by JP Selecta, used for visual reading. The background at the bottom can be changed from black to white [<a href="#B26-diagnostics-12-02106" class="html-bibr">26</a>].</p>
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<p>Photo of the inhibition zone produced by <span class="html-italic">Salmonella</span> Typhimurium with: (<b>a</b>) initial reference method with Mueller–Hinton agar from Becton, Dickinson and a disc from Bio-Rad with no sign of heteroresistance; (<b>b</b>,<b>c</b>) sign of heteroresistance when using bioMérieux Mueller–Hinton Enterobacterales agar (bioMérieux Inc., Marcy l’ Étoile, France) and an AMC disc from i2a (i2a, Montpellier, France).</p>
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43 pages, 9861 KiB  
Article
Hybrid Electrostatic–Atomic Accelerometer for Future Space Gravity Missions
by Nassim Zahzam, Bruno Christophe, Vincent Lebat, Emilie Hardy, Phuong-Anh Huynh, Noémie Marquet, Cédric Blanchard, Yannick Bidel, Alexandre Bresson, Petro Abrykosov, Thomas Gruber, Roland Pail, Ilias Daras and Olivier Carraz
Remote Sens. 2022, 14(14), 3273; https://doi.org/10.3390/rs14143273 - 7 Jul 2022
Cited by 21 | Viewed by 3288
Abstract
Long-term observation of Earth’s temporal gravity field with enhanced temporal and spatial resolution is a major objective for future satellite gravity missions. Improving the performance of the accelerometers present in such missions is one of the main paths to explore. In this context, [...] Read more.
Long-term observation of Earth’s temporal gravity field with enhanced temporal and spatial resolution is a major objective for future satellite gravity missions. Improving the performance of the accelerometers present in such missions is one of the main paths to explore. In this context, we propose to study an original concept of a hybrid accelerometer associating a state-of-the-art electrostatic accelerometer (EA) and a promising quantum sensor based on cold atom interferometry. To assess the performance potential of such an instrument, numerical simulations were performed to determine its impact in terms of gravity field retrieval. Taking advantage of the long-term stability of the cold atom interferometer (CAI), it is shown that the reduced drift of the hybrid sensor could lead to improved gravity field retrieval. Nevertheless, this gain vanishes once temporal variations of the gravity field and related aliasing effects are taken into account. Improved de-aliasing models or some specific satellite constellations are then required to maximize the impact of the accelerometer performance gain. To evaluate the achievable acceleration performance in-orbit, a numerical simulator of the hybrid accelerometer was developed and preliminary results are given. The instrument simulator was in part validated by reproducing the performance achieved with a hybrid lab prototype operating on the ground. The problem of satellite rotation impact on the CAI was also investigated both with instrument performance simulations and experimental demonstrations. It is shown that the proposed configuration, where the EA’s proof-mass acts as the reference mirror for the CAI, seems a promising approach to allow the mitigation of satellite rotation. To evaluate the feasibility of such an instrument for space applications, a preliminary design is elaborated along with a preliminary error, mass, volume, and electrical power consumption budget. Full article
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<p>Output signal <span class="html-italic">P</span> of a cold atom accelerometer. One measurement <math display="inline"><semantics> <msub> <mi>P</mi> <mi>i</mi> </msub> </semantics></math> corresponds to several possible acceleration values <math display="inline"><semantics> <msubsup> <mi>a</mi> <mi>i</mi> <mi>n</mi> </msubsup> </semantics></math>, <math display="inline"><semantics> <msubsup> <mi>a</mi> <mi>i</mi> <mrow> <mo>*</mo> <mi>n</mi> </mrow> </msubsup> </semantics></math>. This ambiguity can be resolved thanks to hybridization with a classical accelerometer. Here, <math display="inline"><semantics> <mrow> <msub> <mi>P</mi> <mn>0</mn> </msub> <mo>=</mo> <mn>0.5</mn> </mrow> </semantics></math> and <math display="inline"><semantics> <mrow> <mi>C</mi> <mo>=</mo> <mn>1</mn> </mrow> </semantics></math>.</p>
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<p>Typical atom interferometer sequence. After cooling and trapping the atoms, the interferometer is realized with a total duration time <math display="inline"><semantics> <mrow> <mn>2</mn> <mi>T</mi> </mrow> </semantics></math>. The phase at the output of the interferometer is measured during the subsequent detection phase. The measurement is given with a cycling time <math display="inline"><semantics> <msub> <mi>T</mi> <mi>c</mi> </msub> </semantics></math>. The atomic instrument is only sensitive to acceleration during the interferometer period.</p>
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<p>(<b>a</b>) Principle of the servo-control loop for one accelerometer’s axis. (<b>b</b>) Configuration of the electrodes around the proof-mass for the six-degree-of-freedom control.</p>
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<p>Noise performance specifications on the ultra-sensitive axis (USA) of the EAs used in CHAMP, GRACE-FO, GOCE, and foreseen for NGGM.</p>
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<p>Illustration of a GRACE-type (<b>left</b>) and a Bender-type (<b>right</b>) flight formation. This figure is extracted from [<a href="#B66-remotesensing-14-03273" class="html-bibr">66</a>].</p>
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<p>ASD of the EA/CAI hybridization scenario and a regular EA assuming a <math display="inline"><semantics> <mrow> <mn>1</mn> <mo>/</mo> <msup> <mi>f</mi> <mn>3</mn> </msup> </mrow> </semantics></math> noise slope and corner frequencies (cf) of 0.3 mHz (<b>a</b>), 1 mHz (<b>b</b>), and 3 mHz (<b>c</b>). The dotted line depicts the spectrum common to the respective hybridization scenario and the stand-alone EA. Vertical dashed grey lines represent the maximal contributing observation frequency to spherical harmonic coefficients of the given degree. The thick dashed grey line represents the laser ranging interferometer noise in terms of range accelerations.</p>
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<p>Scheme of the hybrid lab prototype comprising a cold atom gravimeter and an electrostatic accelerometer. In this configuration, the proof-mass of the EA acts as the retro-reflecting Raman mirror, the reference mirror for the CAI measurement.</p>
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<p>Representation of the experimental setup ((<b>a</b>) side view and (<b>b</b>) top view) used to study rotation impact on the CAI and to demonstrate rotation compensation through EA proof-mass actuation. The dimensions are not to scale. The distance between PZT A–PZT B and PZT B–PZT C is 56 cm.</p>
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<p>Global view of the software simulator for the in-orbit operation of the hybrid accelerometer.</p>
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<p>Global structure of the hybridization algorithm.</p>
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<p>Degree RMS of residual coefficients for a <b>GRACE-type mission</b> under consideration of the static gravity field signal and a hybrid accelerometer with a <math display="inline"><semantics> <mrow> <mn>1</mn> <mo>/</mo> <msup> <mi>f</mi> <mn>3</mn> </msup> </mrow> </semantics></math> EA noise slope for an EA corner frequency (<b>a</b>) of 0.3 mHz (<b>left</b>), (<b>b</b>) of 1 mHz (<b>center</b>), and (<b>c</b>) of 3 mHz (<b>right</b>). The respective formal errors are shown as dashed lines of the corresponding color.</p>
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<p>Degree RMS of residual coefficients for a <b>Bender-type mission</b> under consideration of the static gravity field signal and a hybrid accelerometer with a <math display="inline"><semantics> <mrow> <mn>1</mn> <mo>/</mo> <msup> <mi>f</mi> <mn>3</mn> </msup> </mrow> </semantics></math> EA noise slope for an EA corner frequency (<b>a</b>) of 0.3 mHz, (<b>b</b>) of 1 mHz, and (<b>c</b>) of 3 mHz. The respective formal errors are shown as dashed lines of the corresponding color.</p>
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<p>Relative improvement of the formal errors for <span class="html-italic">Case 3</span> (<b>a</b>) and <span class="html-italic">Case 4</span> (<b>b</b>) towards the EA scenario for a <b>GRACE-type mission</b> under consideration of the static gravity field signal and a hybrid accelerometer with a <math display="inline"><semantics> <mrow> <mn>1</mn> <mo>/</mo> <msup> <mi>f</mi> <mn>3</mn> </msup> </mrow> </semantics></math> EA noise slope, as well as an EA corner frequency of 1 mHz. Global geoid height errors are shown for EA-only (<b>c</b>), <span class="html-italic">Case 3</span> (<b>a’</b>), and <span class="html-italic">Case 4</span> (<b>b’</b>).</p>
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<p>Drag signal model at a 361 km altitude, extrapolated from [<a href="#B71-remotesensing-14-03273" class="html-bibr">71</a>].</p>
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<p>Retrieval error with scale factor and instrument noise contributors, considering a stand-alone EA (<b>a</b>) and the corresponding LOS projection (<b>b</b>).</p>
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<p>Retrieval error contributors with scale factor and instrument noise contributors, considering a <span class="html-italic">Case 2</span> 1D-hybridized instrument (<b>a</b>) and the corresponding LOS projection (<b>b</b>).</p>
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<p>ASD acceleration noise for the EA (black curve), the cold atom gravimeter (blue curve), and the EA corrected by the CAI through a hybridization algorithm (red curve). The interrogation time of the CAI was set to <math display="inline"><semantics> <mrow> <mi>T</mi> <mo>=</mo> <mn>20</mn> </mrow> </semantics></math> ms to highlight the interest of hybridization and reproducing qualitatively the noise assumptions treated in the numerical gravity simulations. Note that, at a high frequency (<math display="inline"><semantics> <mrow> <mspace width="0.222222em"/> <mn>1</mn> </mrow> </semantics></math> Hz), the red curve is completely superimposed on the black one.</p>
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<p>EA’s PM rotation and impact on CAI’s contrast. (<b>a</b>) Proof-mass angle <math display="inline"><semantics> <mi mathvariant="sans-serif">Ψ</mi> </semantics></math> measurement during the interferometer phase delimited by the three laser pulse detected thanks to a photodiode (red signal). The rotation excitation is made at 10.87 Hz with an amplitude of 106 <math display="inline"><semantics> <mi mathvariant="sans-serif">μ</mi> </semantics></math>rad p-p. Two excitation phases are represented, 0 rad (black) and <math display="inline"><semantics> <mrow> <mi>π</mi> <mo>/</mo> <mn>2</mn> </mrow> </semantics></math> rad (blue). The excitation phase is defined relative to the first Raman laser pulse of the CAI. The dashed yellow lines are sine-fitting functions. (<b>b</b>) Evolution of the atomic contrast according to the excitation phase for a 10.87 Hz sine excitation of amplitude 106 <math display="inline"><semantics> <mo>μ</mo> </semantics></math>rad p-p. The experimental data are represented in black dots with <math display="inline"><semantics> <mrow> <mo>±</mo> <mn>2</mn> <mi>σ</mi> </mrow> </semantics></math> error bars. The red dashed line results from a calculation of contrast loss using as inputs the same experimental excitation parameters. The interrogation time of the CAI is <math display="inline"><semantics> <mrow> <mi>T</mi> <mo>=</mo> <mn>46</mn> </mrow> </semantics></math> ms.</p>
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<p>Contrast loss due to platform excitation with a sine actuation at 8.1 Hz around the <span class="html-italic">Z</span> axis. The angular velocity of the platform is measured thanks to a gyroscope. The red dashed line represents a Gaussian fit, in agreement with the expected contrast decrease. The interrogation time of the CAI is <math display="inline"><semantics> <mrow> <mi>T</mi> <mo>=</mo> <mn>46</mn> </mrow> </semantics></math> ms.</p>
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<p>(<b>a</b>) Active rotation compensation impact on the CAI contrast for a platform excitation at 5.435 Hz. The variation of the CAI contrast is reported according to the gain amplitude of the compensation signal. (<b>b</b>) PM angular velocity amplitude (left axis) and angular amplitude (right axis) according to the compensation gain. For 0 gain, the proof-mass is not moved and the CAI contrast loss is only due to platform rotation. For a gain of <math display="inline"><semantics> <mrow> <mo>≈</mo> <mo>−</mo> </mrow> </semantics></math>2.6 (×2000), the CAI contrast is retrieved at a maximum of ≈85%. For a gain of <math display="inline"><semantics> <mrow> <mo>≈</mo> <mo>−</mo> </mrow> </semantics></math>5.3(×2000), the atomic contrast returns to a value similar to that obtained with only the platform excited and the PM motionless.</p>
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<p>ASD of noise for the EA HybridSTAR given for the three axis in case of a non-rotating proof-mass.</p>
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<p>ASD of the acceleration noise, for the electrostatic accelerometer in black, the atom interferometer in blue, and the resulting combination in red. These data are provided by the developed hybrid instrument simulator.</p>
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<p>Interferometric signal when using a fixed CAI reference mirror (yellow) and when using the electrostatic proof-mass, acting as the reference mirror, to compensate for the satellite rotation (purple). The simulation is performed with a simulated atomic cloud of 100 atoms, a standard deviation of the atomic velocities of 2.5 mm/s, of the initial atomic positions of 2 mm, and an interrogation time of <math display="inline"><semantics> <mrow> <mi>T</mi> <mo>=</mo> <mn>1</mn> </mrow> </semantics></math> s.</p>
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<p>Control of the electrostatic proof-mass angular position during an interferometric cycle. The angular velocity to be compensated between <math display="inline"><semantics> <msub> <mi>t</mi> <mn>1</mn> </msub> </semantics></math> (first CAI laser pulse) and <math display="inline"><semantics> <msub> <mi>t</mi> <mn>3</mn> </msub> </semantics></math> (last CAI laser pulse) is represented in red.</p>
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<p>HybridSTAR accelerometer noise performance obtained with the hybrid instrument simulator. The EA’s proof-mass is rotated around the <span class="html-italic">Y</span> axis for satellite rotation compensation. The noise along the radial axis <span class="html-italic">Z</span> is slightly degraded due to this functionality.</p>
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<p>(<b>a</b>) Dependence of the acceleration sensitivity according to the interrogation time <span class="html-italic">T</span>. The dashed red line shows the sensitivity decrease, scaling as <math display="inline"><semantics> <mrow> <mn>1</mn> <mo>/</mo> <msup> <mi>T</mi> <mn>2</mn> </msup> </mrow> </semantics></math>. (<b>b</b>) Dependence of the number of detected atoms according to the interrogation time <span class="html-italic">T</span>.</p>
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<p>Contrast loss due to the different rotation terms for a satellite in orbit.</p>
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<p>(<b>a</b>) HybridSTAR electrostatic accelerometer. (<b>b</b>) HybridSTAR electrode plates with the cubic proof-mass.</p>
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<p>(<b>a</b>) HybridSTAR accelerometer performance on the along-track and cross-track axis. (<b>b</b>) HybridSTAR accelerometer performance on the radial axis.</p>
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<p>(<b>a</b>) Global hybrid instrument architecture. (<b>b</b>) Exploded view of the hybrid architecture.</p>
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<p>Temporal sequence describing the intermittent mode. The standard mode (up) allows acceleration measurements each <math display="inline"><semantics> <msub> <mi>T</mi> <mi>c</mi> </msub> </semantics></math>. In the intermittent mode (bottom), the measurements are now only each <math display="inline"><semantics> <mrow> <mi>n</mi> <mo>·</mo> <msub> <mi>T</mi> <mi>c</mi> </msub> </mrow> </semantics></math>. In this example, we take <math display="inline"><semantics> <mrow> <mi>n</mi> <mo>=</mo> <mn>4</mn> </mrow> </semantics></math>. In between, the CAI is put in low power consumption mode (standby mode) allowing lowering the average electrical power consumption.</p>
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<p>Evolution of the CAI noise (QPN) due to intermittent operation for an interrogation time <math display="inline"><semantics> <mrow> <mi>T</mi> <mo>=</mo> <mn>2</mn> </mrow> </semantics></math> s and a cycling time <math display="inline"><semantics> <mrow> <msub> <mi>T</mi> <mi>c</mi> </msub> <mo>=</mo> <mn>6</mn> </mrow> </semantics></math> s in standard mode. The orange, purple, and green curves correspond, respectively, to an effective measurement cycling time of 6 s (<math display="inline"><semantics> <mrow> <mi>n</mi> <mo>=</mo> <mn>1</mn> </mrow> </semantics></math>), 42 s (<math display="inline"><semantics> <mrow> <mi>n</mi> <mo>=</mo> <mn>7</mn> </mrow> </semantics></math>), and 402 s (<math display="inline"><semantics> <mrow> <mi>n</mi> <mo>=</mo> <mn>67</mn> </mrow> </semantics></math>).</p>
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16 pages, 2965 KiB  
Article
Fatigue Performance of Laser Welds in Heavy-Gage Press Hardening Steels
by Diego Tolotti de Almeida, Kleber Eduardo Bianchi, João Henrique Corrêa de Souza, Milton Sergio Fernandes de Lima, Thomas Gabriel Rosauro Clarke, Fabio Pinto da Silva and Hardy Mohrbacher
Metals 2022, 12(4), 580; https://doi.org/10.3390/met12040580 - 29 Mar 2022
Cited by 2 | Viewed by 2417
Abstract
This work investigates and compares the fatigue performance of laser-welded joints of two press hardening steels: a standard 22MnB5 and a variant modified by a combination of niobium and molybdenum (NbMo) alloying. The results indicate that joint geometry aspects, superposed to an intrusion-generated [...] Read more.
This work investigates and compares the fatigue performance of laser-welded joints of two press hardening steels: a standard 22MnB5 and a variant modified by a combination of niobium and molybdenum (NbMo) alloying. The results indicate that joint geometry aspects, superposed to an intrusion-generated damage mechanism, were prevalent in causing a poor fatigue life in the case of peak stress values greater than 11% of the base metal's ultimate strength being around 1450 MPa. As identical process procedures were employed, the tests allowed investigating the influence of the alloy design on fatigue performance. The results of geometrical analysis and fatigue tests indicated that the NbMo modified alloy performed better than the standard 22MnB5 steel. The results also suggest that, if extremely tight quality limits are used in the manufacturing procedures, laser-welded joints of press hardened steels could offer a very favorable fatigue performance being considerably better than that of conventional and high strength structural steels. Full article
(This article belongs to the Topic Laser Welding of Metallic Materials)
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<p>Geometry of the fatigue test specimens (all dimensions in mm) with fixture spam and grip regions according to ISO 6892-1.</p>
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<p>S–N diagram of laser-welded standard 22MnB5 steel.</p>
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<p>S–N diagram of laser-welded NbMo modified 22MnB5 steel.</p>
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<p>Comparison of S–N diagrams for the two laser-welded 22MnB5 steels.</p>
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<p>Mirrored fracture surfaces after fatigue failure. Standard 22MnB5 steel, tested at Δσ = 309.5 MPa [σ<sub>max</sub> ≅ 344 MPa ≅ (0.24)S<sub>u-standard</sub>] failure after 75,696 cycles. NbMo modified 22MnB5 steel, tested at Δσ = 307 MPa [σ<sub>max</sub> ≅ 341 MPa ≅ (0.23)S<sub>u-modified</sub>] failure after 216,578 cycles. Representative cross-sectional micrograph of the double-pass laser weld indicates the position of the weld overlap region (red dashed line).</p>
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<p>Profilometric measurements across selected laser weld seams: (<b>a</b>) NbMo modified steel specimen and (<b>b</b>) standard steel specimen before flush grinding.</p>
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<p>Microstructural characteristics in the heat-affected zone (HAZ) and fusion zone (FZ); A<sub>1</sub> and A<sub>3</sub> are the transformation temperatures delineating the intercritical zone (dashed lines); IP designates the interpass zone experiencing two successive weld passes; BM is the base material. Micro Vickers hardness evolution across the weld zone (dotted red line) is similar in both steels.</p>
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17 pages, 2454 KiB  
Article
Monitoring of Unfractionated Heparin Therapy in the Intensive Care Unit Using a Point-of-Care aPTT: A Comparative, Longitudinal Observational Study with Laboratory-Based aPTT and Anti-Xa Activity Measurement
by Benjamin Lardinois, Michaël Hardy, Isabelle Michaux, Geoffrey Horlait, Thomas Rotens, Hugues Jacqmin, Sarah Lessire, Pierre Bulpa, Alain Dive and François Mullier
J. Clin. Med. 2022, 11(5), 1338; https://doi.org/10.3390/jcm11051338 - 28 Feb 2022
Cited by 10 | Viewed by 4586
Abstract
Continuous intravenous unfractionated heparin (UFH) is administered routinely in the intensive care unit (ICU) for the anticoagulation of patients, and monitoring is performed by the activated partial thromboplastin time (APTT) or anti-Xa activity. However, these strategies are associated with potentially large time intervals [...] Read more.
Continuous intravenous unfractionated heparin (UFH) is administered routinely in the intensive care unit (ICU) for the anticoagulation of patients, and monitoring is performed by the activated partial thromboplastin time (APTT) or anti-Xa activity. However, these strategies are associated with potentially large time intervals before dose adjustments, which could be detrimental to the patient. The aim of the study was to compare a point-of-care (POCT) version of the APTT to (i) laboratory-based APTT and (ii) measurements of anti-Xa activity in terms of correlation, agreement and turnaround time (TAT). Thirty-five ICU patients requiring UFH therapy were prospectively included and followed longitudinally for a maximum duration of 15 days. UFH was administered according to a local adaptation of Raschke and Amanzadeh’s aPTT nomograms. Simultaneous measurements of POCT-APTT (CoaguCheck® aPTT Test, Roche Diagnostics) on a drop of fresh whole blood, laboratory-based APTT (C.K. Prest®, Stago) and anti-Xa activity (STA®Liquid anti-Xa, Stago) were systematically performed two to six times a day. Antithrombin, C-reactive protein, fibrinogen, factor VIII and lupus anticoagulant were measured. The time tracking of sampling and analysis was recorded. The overall correlation between POCT-APTT and laboratory APTT (n = 795 pairs) was strongly positive (rs = 0.77, p < 0.0001), and between POCT-APTT and anti-Xa activity (n = 729 pairs) was weakly positive (rs = 0.46, p < 0.0001). Inter-method agreement (Cohen’s kappa (k)) between POCT and laboratory APTT was 0.27, and between POCT and anti-Xa activity was 0.30. The median TATs from sample collection to the lab delivery of results for lab-APTT and anti-Xa were 50.9 min (interquartile range (IQR), 38.4–69.1) and 66.3 min (IQR, 49.0–91.8), respectively, while the POCT delivered results in less than 5 min (p < 0.0001). Although the use of the POCT-APTT device significantly reduced the time to results, the results obtained were poorly consistent with those obtained by lab-APTT or anti-Xa activity, and therefore it should not be used with the nomograms developed for lab-APTT. Full article
(This article belongs to the Section Gastroenterology & Hepatopancreatobiliary Medicine)
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<p>Flow diagram of identification, eligibility and inclusion processes. The basal POCT is the first POCT obtained before starting UFH administration. COVID, coronavirus disease 2019; POCT, point of care test; UFH, unfractionated heparin.</p>
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<p>Overall correlation of POCT-APTT vs. laboratory APTT (<b>left</b> panel, <span class="html-italic">n</span> = 795) and POCT-APTT vs. anti-Xa (<b>right</b> panel, <span class="html-italic">n</span> = 729) from the 35 patients included in the study.</p>
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<p>Temporal changes in POCT-APTT (brown), lab-APTT (blue) and anti-Xa (orange) levels during ICU stays for the 35 patients. Major or minor bleedings are symbolized by red triangles or dots above the graphs, respectively. No thrombotic events were recorded. APTT, activated partial thromboplastin time; ICU, intensive care unit; POCT, point-of-care testing.</p>
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<p>Correlations of the POCT-APTT ratios vs. laboratory APTT ratios (left panels) and POCT-APTT ratios vs. chromogenic anti-Xa activity measurement (right panels), according to overall (top panels), high (center panels) or low (bottom panels) therapeutic target ranges from the 29 patients with basal POCT and basal lab-APTT measurements. The grey zone corresponds to the desired therapeutic range and tick lines represent the lower and the upper limits of this range for the corresponding assay. Pairs in agreement, unsatisfactory and contradictory categories are symbolized by green, orange and red dots, respectively. APTT, activated partial thromboplastin time; POCT, point-of-care testing; rs, Spearman correlation coefficient.</p>
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<p>Relationships and inter-method agreements for POCT-APTT ratios vs. laboratory APTT ratios (left histograms) and POCT-APTT ratios vs. anti-Xa (right histograms), according to overall, low or high therapeutic ranges. Cohen’s Kappa coefficients are shown below each corresponding histogram.</p>
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<p>Turnaround times from sample collection to delivery results for POCT-APTT (brown), lab-APTT (blue) and anti-Xa (orange).</p>
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20 pages, 38920 KiB  
Article
Differential Stimulation of Pluripotent Stem Cell-Derived Human Microglia Leads to Exosomal Proteomic Changes Affecting Neurons
by Anna Mallach, Johan Gobom, Charles Arber, Thomas M. Piers, John Hardy, Selina Wray, Henrik Zetterberg and Jennifer Pocock
Cells 2021, 10(11), 2866; https://doi.org/10.3390/cells10112866 - 24 Oct 2021
Cited by 9 | Viewed by 3836
Abstract
Microglial exosomes are an emerging communication pathway, implicated in fulfilling homeostatic microglial functions and transmitting neurodegenerative signals. Gene variants of triggering receptor expressed on myeloid cells-2 (TREM2) are associated with an increased risk of developing dementia. We investigated the influence of the TREM2 [...] Read more.
Microglial exosomes are an emerging communication pathway, implicated in fulfilling homeostatic microglial functions and transmitting neurodegenerative signals. Gene variants of triggering receptor expressed on myeloid cells-2 (TREM2) are associated with an increased risk of developing dementia. We investigated the influence of the TREM2 Alzheimer’s disease risk variant, R47Hhet, on the microglial exosomal proteome consisting of 3019 proteins secreted from human iPS-derived microglia (iPS-Mg). Exosomal protein content changed according to how the iPS-Mg were stimulated. Thus lipopolysaccharide (LPS) induced microglial exosomes to contain more inflammatory signals, whilst stimulation with the TREM2 ligand phosphatidylserine (PS+) increased metabolic signals within the microglial exosomes. We tested the effect of these exosomes on neurons and found that the exosomal protein changes were functionally relevant and influenced downstream functions in both neurons and microglia. Exosomes from R47Hhet iPS-Mg contained disease-associated microglial (DAM) signature proteins and were less able to promote the outgrowth of neuronal processes and increase mitochondrial metabolism in neurons compared with exosomes from the common TREM2 variant iPS-Mg. Taken together, these data highlight the importance of microglial exosomes in fulfilling microglial functions. Additionally, variations in the exosomal proteome influenced by the R47Hhet TREM2 variant may underlie the increased risk of Alzheimer’s disease associated with this variant. Full article
(This article belongs to the Collection Microglia in Aging and Neurodegenerative Diseases)
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Graphical abstract

Graphical abstract
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<p>Following treatment, exosomes fell into specific clusters. Following the LC-MS/MS process, a heatmap of the exosomal proteins was constructed to analyse the effect of the different iPS-Mg treatments on exosomal proteome content (<b>A</b>). The relative abundance of proteins associated with different biological processes, identified with FunRich, was plotted for the different conditions, with the diameter of the circles representing protein abundance (<b>B</b>). Principal component analysis (PCA) was used to find clusters between the different samples (<b>C</b>,<b>D</b>). N = 3 independent samples analysed by LC-MS/MS for each condition.</p>
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<p>Proteins associated with the DAM microglia signature are found in exosomes. The exosomal proteomic profile was compared with a list of published DAM-related proteins [<a href="#B36-cells-10-02866" class="html-bibr">36</a>,<a href="#B37-cells-10-02866" class="html-bibr">37</a>,<a href="#B38-cells-10-02866" class="html-bibr">38</a>]. R47H<sup>het</sup> exosomes contained a subset of DAM-associated proteins (indicated in orange) at higher levels than Cv exosomes (<b>A</b>). These proteins were particularly enriched with the TREM2-dependent second stage of DAM [<a href="#B36-cells-10-02866" class="html-bibr">36</a>]. The relative abundance of the DAM proteins in the exosomes was normalised to the abundance observed in Cv exosomes of these second-stage DAM-associated proteins (<b>B</b>). The expression of DAM-associated genes was measured in the iPS-Mg using qPCR to assess whether the changes observed in the exosomes reflected differences at the cellular level or in the packaging (<b>C</b>). For (<b>A</b>,<b>B</b>), N = 3 independent samples analysed through LC-MS/MS for each condition, whilst for (<b>C</b>), N = 4 independent experiments. Two-way ANOVA with * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01.</p>
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<p>Network analysis. Based on the constructed networks, the relationship between the different iPS-Mg treatments and the identified modules was plotted. The treatment–module relationships are shown for the Cv network (<b>A</b>) and the R47Hhet network (<b>B</b>). The correlations are indicated in the boxes with the <span class="html-italic">p</span> values in parentheses. The direction of the correlation was colour-coded, with positive correlations indicated in red and negative correlations in blue. The overlap between the modules identified in the Cv and R47Hhet network was also plotted (<b>C</b>), with the number of shared proteins represented in the boxes and the –log (<span class="html-italic">p</span> value) indicated by the colouring. N = 3 independent samples analysed by LC-MS/MS for each condition.</p>
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<p>Microglial exosomes can activate naïve microglia. Based on the previous analysis (<a href="#cells-10-02866-f003" class="html-fig">Figure 3</a>), which showed large changes in the immune cluster following activation of iPS-Mg with LPS, the effect of iPS-Mg exosomes on naïve iPS-Mg was measured, specifically, the ability of exosomes from LPS activated iPS-Mg to transmit this information to naïve iPS-Mg. The experimental setup for (<b>B</b>,<b>D</b>) is shown in (<b>A</b>,<b>C</b>), respectively. The expression levels of <span class="html-italic">TNF, IL6</span> and <span class="html-italic">IL1B</span> were determined by qPCR and are shown for Cv iPS-Mg exposed to Cv exosomes (<b>B</b>) and for R47H<sup>het</sup> iPS-Mg exposed to R47H exosomes (<b>D</b>). N = 3 separate experiments with one-way ANOVA. * <span class="html-italic">p</span> &lt; 0.05, *** <span class="html-italic">p</span> &lt; 0.001.</p>
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<p>Microglial exosomes support neuronal outgrowth. The ability of exosomes to support neuronal outgrowth was analysed in iPS-neurons exposed to basal Cv and R47H<sup>het</sup> exosomes. Representative images of iPS-neurons stained with Tuj1 (green) and DAPI (blue nuclear stain) (<b>A</b>). Plots of skeletonised neuronal process lengths and plots of skeletonised neuronal process lengths normalised to overall Tuj1 staining (<b>B</b>) are shown. To verify whether this change was associated with increased neuronal outgrowth, the level of GAP43 staining was quantified in Tuj1-positive projections. Representative images (<b>C</b>) following quantification of the overlap (<b>D</b>) are shown. N = 3 coverslips per condition with eight ROI analysed per coverslip with one-way ANOVA. * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01.</p>
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<p>Microglial exosomes can influence neuronal metabolism. Based on the identification of the metabolism cluster and the differences between Cv and R47H<sup>het</sup> exosomes in this cluster, the effect of exosomes on neuronal metabolism was tested in SH-SY5Y neurons (experimental setup: (<b>A</b>). The metabolic rate was approximated using the MTT assay (<b>B</b>). The production of ATP in the cells was measured with an ATP assay (<b>C</b>) after SH-SY5Y neurons were exposed to exosomes from Cv and R47H<sup>het</sup> iPS-Mg. The relative expression of various genes in SH-SY5Y neurons and iPS-neurons after they were exposed to basal Cv and basal R47H<sup>het</sup> exosomes was determined by qPCR, with the experimental setup shown in (<b>D</b>). The expression of <span class="html-italic">PPARGC, NRF1 and HSPD1</span> was analysed in SH-SY5Y neurons (<b>E</b>) and in iPS-neurons (<b>F</b>) in addition to the levels of <span class="html-italic">MAPT</span> in iPS-neurons (<b>F</b>). N = 4 independent experiments for (<b>B</b>); N = 3 independent experiments for (<b>C</b>–<b>F</b>) with one-way ANOVA (<b>B</b>,<b>C</b>,<b>E,F</b>) or two-way ANOVA (<b>B</b>,<b>C</b>). * <span class="html-italic">p</span> &lt; 0.05.</p>
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Article
Dexamethasone Alters Tracheal Aspirate T-Cell Cytokine Production in Ventilated Preterm Infants
by Siamak M. Yazdi, Ekta U. Patel, Colby D. Richardson, K. Thomas Hardy, John E. Baatz, Jennifer K. Mulligan and Rita M. Ryan
Children 2021, 8(10), 879; https://doi.org/10.3390/children8100879 - 2 Oct 2021
Cited by 3 | Viewed by 2195
Abstract
Postnatal corticosteroids improve respiratory status and facilitate respiratory support weaning in preterm infants with bronchopulmonary dysplasia (BPD). Older literature describes characteristic cytokine profiles in tracheal aspirates (TA) of BPD patients which are altered with corticosteroids. Corticosteroids also influence peripheral blood T-cell presence. However, [...] Read more.
Postnatal corticosteroids improve respiratory status and facilitate respiratory support weaning in preterm infants with bronchopulmonary dysplasia (BPD). Older literature describes characteristic cytokine profiles in tracheal aspirates (TA) of BPD patients which are altered with corticosteroids. Corticosteroids also influence peripheral blood T-cell presence. However, little is known regarding TA T-cell phenotype and cytokine production before or after exogenous corticosteroids. We hypothesized that postnatal dexamethasone alters the TA T-cell cytokine profiles of preterm infants. TA samples were collected from 14 infants born from 23 0/7 to 28 6/7 weeks who were mechanically ventilated for at least 14 days. Samples were collected up to 72 h before a ten-day dexamethasone course and again 1 to 3 calendar days after dexamethasone initiation. The primary outcome was change in T cell populations present in TA and their intracellular cytokine profile after dexamethasone treatment, ascertained via flow cytometry. Following dexamethasone treatment, there were significant decreases in respiratory severity score (RSS), percent CD4+IL-6+ cells, CD8+IL-6+ cells, CXCR3+IL-6+ cells, and CXCR3+IL-2+ cells and total intracellular IFN-γ in TA. RSS significantly correlated with TA percent CD4+IL-6+ cells. To our knowledge, this is the first study demonstrating that dexamethasone reduced T-cell IL-6 and this reduction was associated with improved RSS in pre-term infants with evolving BPD. Full article
(This article belongs to the Special Issue Neonatal Respiratory Distress Update)
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Figure 1

Figure 1
<p>Effect of Dexamethasone on TA Cytokine Expression and T-Cell Composition (<b>A</b>–<b>F</b>). Dexamethasone significantly reduced tracheal aspirate (TA) IFNγ<sup>+</sup> cells. (<a href="#children-08-00879-f001" class="html-fig">Figure 1</a>F, * <span class="html-italic">p</span> = 0.01), but not IL-2<sup>+</sup> or IL-6<sup>+</sup> cells), and did not affect T-cell composition when assessed by flow cytometry. Statistical analysis performed by two-tailed, paired Wilcoxon matched-pairs signed rank test, <span class="html-italic">n</span> = 14. Lines in the box and whisker plots represent the median, box extends from the 25th to 75th percentile, and the bars represent range.</p>
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<p>Effect of Dexamethasone on TA T-Cell Subpopulations Expressing IL-2, IL-6, and IFNγ (<b>A</b>–<b>I</b>). Several subpopulations of tracheal aspirate (TA) T-cells were significantly altered after dexamethasone initiation. Flow cytometry demonstrated a significant reduction in CD4<sup>+</sup>IL-6<sup>+</sup>(panel B, * <span class="html-italic">p</span> = 0.01), CD8<sup>+</sup>IL-6 <sup>+</sup>(E, * <span class="html-italic">p</span> = 0.01), CXCR3<sup>+</sup>IL-2<sup>+</sup> (G, * <span class="html-italic">p</span> = 0.04), and CXCR3<sup>+</sup>IL-6<sup>+</sup> (H, * <span class="html-italic">p</span> = 0.006) live cells in TA of mechanically ventilated preterm infants following dexamethasone initiation. Infants had TA obtained up to 72 h prior to initiation of the 10-day dexamethasone course and then a subsequent TA collection 1 to 3 calendar days after dexamethasone was initiated. <span class="html-italic">n</span> = 14. Statistical comparisons generating reported <span class="html-italic">p</span> values were by Wilcoxon signed-rank test.</p>
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<p>Tracheal aspirate (TA) cell phenotype of CD4+IL-6+ cells was significantly correlated with respiratory severity score (RSS, MAP × FiO2). As RSS decreased, the percent of CD4+IL-6 cells decreased, suggesting alterations in inflammation represented by CD4+IL-6+ expression are important for clinical respiratory status. Infants had TA obtained up to 72 h prior to initiation of the 10-day dexamethasone course and then a subsequent TA collection 1 to 3 calendar days after dexamethasone was initiated. <span class="html-italic">n</span> = 14. RSS was calculated on day 0 prior to dexamethasone initiation and 72 h later. Correlation was measured by Pearson’s correlation. Black circles indicate samples pre-dexamethasone. Open circles indicate samples post-dexamethasone.</p>
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