Nothing Special   »   [go: up one dir, main page]

You seem to have javascript disabled. Please note that many of the page functionalities won't work as expected without javascript enabled.
 
 
Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Article Types

Countries / Regions

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Search Results (646)

Search Parameters:
Keywords = Ruta

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
25 pages, 2649 KiB  
Article
Leveraging Machine Learning to Forecast Neighborhood Energy Use in Early Design Stages: A Preliminary Application
by Andrea Giuseppe di Stefano, Matteo Ruta, Gabriele Masera and Simi Hoque
Buildings 2024, 14(12), 3866; https://doi.org/10.3390/buildings14123866 - 30 Nov 2024
Viewed by 482
Abstract
The need for energy efficiency in neighborhood-scale architectural design is driven by environmental imperatives and escalating energy costs. This study identifies three key phases in a design process framework where machine learning can be applied to optimize energy consumption in early design stages. [...] Read more.
The need for energy efficiency in neighborhood-scale architectural design is driven by environmental imperatives and escalating energy costs. This study identifies three key phases in a design process framework where machine learning can be applied to optimize energy consumption in early design stages. The overall framework integrates machine learning tools into the design workflow, enhancing design exploration from concept level and enabling targeted energy assessments. This paper focuses on the first phase (Phase 1) of the framework, which employs machine learning for building energy forecasting using only the few inputs available in a business-as-usual early-stage design workflow. The CatBoost model was selected for its high accuracy in predicting energy consumption using minimal input data. A preliminary application to a case study in New York City showed high predictive accuracy while reducing the input needed, with R2 scores of 0.88 for both cross-validation and test datasets. Shapely additive explanation analysis validated the selection of key influencing parameters such as building area, principal building activity, and climate zones. The test demonstrated discrepancies between the test data-driven model and a physics-based energy model values ranging from −8.69% to 11.04%, which can be considered an acceptable result in early-stage design. The remaining two phases, though outside the scope of this study, are introduced at a conceptual level to provide an overview of the full framework. Phase 2 will analyze building shape and elevation, assessing the total energy use intensity, while Phase 3 will apply district-level energy optimization across interconnected buildings. The findings from Phase 1 underscore the potential of machine learning to integrate energy efficiency considerations into neighborhood-scale design from the earliest stages, providing reliable predictions that can inform sustainable design. Full article
Show Figures

Figure 1

Figure 1
<p>“Phases of the building design lifecycle—Each phase is depicted with a distinct color to denote the corresponding phase, while the circle dimension indicates the level of influence on the project’s energy efficiency and sustainability outcomes” (adapted from [<a href="#B66-buildings-14-03866" class="html-bibr">66</a>]).</p>
Full article ">Figure 2
<p>Framework definition.</p>
Full article ">Figure 3
<p>EUI distribution in the combined dataset. On the left is the original distribution, and on the right the cleaned one, consisting of 22,865 measurements.</p>
Full article ">Figure 4
<p>Heatmap showing the correlation matrix for selected building attributes. The color scale ranges from dark blue to dark red, representing the strength and direction of the correlations.</p>
Full article ">Figure 5
<p>Scatter plot of test set versus predicted values showing the performance of the machine learning model. The diagonal line represents perfect predictions, indicating the model’s accuracy.</p>
Full article ">Figure 6
<p>Comparison of actual versus predicted energy consumption values (in kWh) for the test dataset. The blue bars represent actual values, while the orange bars represent predicted values, illustrating the model’s performance and accuracy in predicting energy use.</p>
Full article ">Figure 7
<p>SHAP summary plot illustrating the impact of various features on the model’s predictions for energy consumption. The horizontal axis represents the SHAP value, indicating the influence of each feature on the model’s output. Features are ranked in descending order of importance.</p>
Full article ">Figure 8
<p>Comparison of actual vs. predicted energy consumption in the reduced inputs dataset.</p>
Full article ">Figure 9
<p>Different buildings cluster configuration. Each color represents a function.</p>
Full article ">
25 pages, 7513 KiB  
Article
Lateral–Torsional Buckling of Externally Prestressed I-Section Steel Beams Subjected to Fire
by Abdellah Mahieddine, Noureddine Ziane, Giuseppe Ruta, Rachid Zahi, Mohamed Zidi and Sid Ahmed Meftah
CivilEng 2024, 5(4), 1110-1134; https://doi.org/10.3390/civileng5040054 (registering DOI) - 29 Nov 2024
Viewed by 192
Abstract
We develop a new analytical and numerical approach, based on existing models, to describe the onset of lateral–torsional buckling (LTB) for simply supported thin-walled steel members. The profiles have uniform I cross-sections with variable lengths of the flanges, to describe also H cross-sections, [...] Read more.
We develop a new analytical and numerical approach, based on existing models, to describe the onset of lateral–torsional buckling (LTB) for simply supported thin-walled steel members. The profiles have uniform I cross-sections with variable lengths of the flanges, to describe also H cross-sections, they are prestressed by external tendons, and they are subjected to fire and various loadings. Our approach manages to update the value of the prestressing force, accounting for thermal and loads; the critical multipliers result from an eigenvalue problem obtained applying Galërkin’s approach to a system of nonlinear equilibrium equations. Our results are compared to buckling, steady state, and transient state analyses of a Finite Element Method (FEM) simulation, in which an original expression for an equivalent thermal expansion coefficient for the beam–tendon system that accounts for both mechanical and thermal strains is introduced. Our aim is to find estimates for the critical conditions with no geometric imperfections and accounting for the decay of material properties due to fire, thus providing limit values useful for conservative design. This approach can surpass others in the literature and in the existing technical norms. Full article
(This article belongs to the Special Issue "Stability of Structures", in Memory of Prof. Marcello Pignataro)
Show Figures

Figure 1

Figure 1
<p>Geometry of the beam and of its links with the tendons (not represented for simplicity).</p>
Full article ">Figure 2
<p>Linear deformations of a prestressed beam in various conditions: (<b>a</b>) unattached pretensioned cable, (<b>b</b>) attached pretensioned cable, (<b>c</b>) prestressed beam under fire, and (<b>d</b>) as in (<b>c</b>), plus end couples (distributed load q and concentrated force Q are not shown for simplicity).</p>
Full article ">Figure 3
<p>Forces acting on the buckled prestressed beam: (<b>a</b>) buckled prestressed beam under distributed load q and concentrated force Q (end couples not shown for simplicity), (<b>b</b>) forces and displacements at the deviator, (<b>c</b>) forces and displacements of tendons due to bending at the anchorage, and (<b>d</b>) forces and displacements of tendons due to warping at the anchorage.</p>
Full article ">Figure 4
<p>Fire on the beam (<b>a</b>); fire protection for tendons (<b>b</b>); mixture model for the cable (<b>c</b>).</p>
Full article ">Figure 5
<p>Cross-section: (<b>a</b>) two- and (<b>b</b>) one-tendon beams-1; (<b>c</b>) two- and (<b>d</b>) one-tendon beams-2.</p>
Full article ">Figure 6
<p>Temperatures of structural elements vs. fire duration.</p>
Full article ">Figure 7
<p>Critical moments vs. fire duration of beams-1 with protected cables under end moments.</p>
Full article ">Figure 8
<p>Critical prestressing forces vs. fire duration of prestressed beams with protected cables.</p>
Full article ">Figure 9
<p>Critical prestressing forces vs. fire duration of prestressed beams with unprotected cables.</p>
Full article ">Figure 10
<p>Critical couples vs. fire duration of beams-1 with protected cables under uniform load.</p>
Full article ">Figure 11
<p>Critical couples vs. fire duration of beams-1 with protected cables under a midspan point load.</p>
Full article ">Figure 12
<p>Critical couples vs. fire duration of beams-2 with protected cables under end couples.</p>
Full article ">Figure 13
<p>Critical couples vs. fire duration of beams-2 with protected cables under uniform load.</p>
Full article ">Figure 14
<p>Critical couples vs. fire duration of beams-2 with protected cables under a midspan point load.</p>
Full article ">Figure 15
<p>Critical moments vs. fire duration of beams-2 with unprotected cables under end couples.</p>
Full article ">Figure 16
<p>Critical moments vs. fire duration of beams-1 with unprotected cables under end couples.</p>
Full article ">Figure 17
<p>Final prestressing forces vs. fire duration of prestressed beams with unprotected cables.</p>
Full article ">Figure 18
<p>Pre- and post-buckling equilibrium paths <math display="inline"><semantics> <mrow> <mo stretchy="false">(</mo> <mi>M</mi> <mo>,</mo> <mo> </mo> <mi>w</mi> <mo stretchy="false">(</mo> <mi>L</mi> <mo>/</mo> <mn>2</mn> <mo stretchy="false">)</mo> <mo stretchy="false">)</mo> </mrow> </semantics></math> of beam-1 with two protected tendons under uniform load and 8 min of fire exposure.</p>
Full article ">Figure 19
<p>Pre- and post-buckling equilibrium paths <math display="inline"><semantics> <mrow> <mo stretchy="false">(</mo> <mi>M</mi> <mo>,</mo> <mo> </mo> <mi>w</mi> <mo stretchy="false">(</mo> <mi>L</mi> <mo>/</mo> <mn>2</mn> <mo stretchy="false">)</mo> <mo stretchy="false">)</mo> </mrow> </semantics></math> of beam-1 with two protected tendons under uniform load and 14 min of fire exposure.</p>
Full article ">Figure 20
<p>Pre- and post-buckling equilibrium paths <math display="inline"><semantics> <mrow> <mo stretchy="false">(</mo> <mi>M</mi> <mo>,</mo> <mo> </mo> <mi>v</mi> <mo stretchy="false">(</mo> <mi>L</mi> <mo>/</mo> <mn>2</mn> <mo stretchy="false">)</mo> <mo stretchy="false">)</mo> </mrow> </semantics></math> of beam-1 with two protected tendons under uniform load and 8 min of fire exposure.</p>
Full article ">Figure 21
<p>Pre- and post-buckling equilibrium paths <math display="inline"><semantics> <mrow> <mo stretchy="false">(</mo> <mi>M</mi> <mo>,</mo> <mo> </mo> <mi>v</mi> <mo stretchy="false">(</mo> <mi>L</mi> <mo>/</mo> <mn>2</mn> <mo stretchy="false">)</mo> <mo stretchy="false">)</mo> </mrow> </semantics></math> of beam-1 with two protected tendons under uniform load and 14 min of fire exposure.</p>
Full article ">Figure 22
<p>Buckled beam-1 from nonlinear analysis using shell elements with two tendons under uniform load and 14 min of fire exposure.</p>
Full article ">Figure 23
<p>Midspan lateral displacements and twist angles vs. fire duration of beam-1 with protected cables under end moments M = 311 kNm, as obtained from FEM transient analysis.</p>
Full article ">
20 pages, 1011 KiB  
Review
Shedding Light on Calcium Dynamics in the Budding Yeast: A Review on Calcium Monitoring with Recombinant Aequorin
by Larisa Ioana Gogianu, Lavinia Liliana Ruta and Ileana Cornelia Farcasanu
Molecules 2024, 29(23), 5627; https://doi.org/10.3390/molecules29235627 - 28 Nov 2024
Viewed by 252
Abstract
Recombinant aequorin has been extensively used in mammalian and plant systems as a powerful tool for calcium monitoring. While aequorin has also been widely applied in yeast research, a notable gap exists in the literature regarding comprehensive reviews of these applications. This review [...] Read more.
Recombinant aequorin has been extensively used in mammalian and plant systems as a powerful tool for calcium monitoring. While aequorin has also been widely applied in yeast research, a notable gap exists in the literature regarding comprehensive reviews of these applications. This review aims to address that gap by providing an overview of how aequorin has been used to explore calcium homeostasis, signaling pathways, and responses to stressors, heavy metals, and toxic compounds in Saccharomyces cerevisiae. We also discuss strategies for further developing the aequorin system in yeast, with particular emphasis on its use as a model for human calcium signaling studies, such as the reproduction of the mitochondrial calcium uniporter. By highlighting previous research and pinpointing potential future applications, we discuss the untapped potential of aequorin in yeast for drug screening, environmental toxicity testing, and disease-related studies. Full article
(This article belongs to the Special Issue Bioactive Compounds in Food and Their Applications)
Show Figures

Figure 1

Figure 1
<p>(<b>a</b>) Crystal structure of aequorin containing the coelenterazine moiety (RCSB PDB ID: 1EJ3); (<b>b</b>) Simulation of Ca<sup>2+</sup> binding to apo-aequorin using AlphaFold3 [<a href="#B31-molecules-29-05627" class="html-bibr">31</a>]. Structures visualization with Chimera X [<a href="#B32-molecules-29-05627" class="html-bibr">32</a>] and labeled based on [<a href="#B33-molecules-29-05627" class="html-bibr">33</a>]. Roman numerals I–IV indicate the position of the EF-hand loops; CTZ = coelenterazine moiety; green spheres represent Ca<sup>2+</sup>.</p>
Full article ">Figure 2
<p>Aequorin light emission upon Ca<sup>2+</sup> binding. (Created in BioRender. ruta, l. (2024) <a href="http://BioRender.com/v42t872" target="_blank">BioRender.com/v42t872</a>).</p>
Full article ">
21 pages, 929 KiB  
Review
Lung Microbiome in Lung Cancer: A Systematic Review
by Sergiu-Remus Lucaciu, Bianca Domokos, Ruxandra Puiu, Victoria Ruta, Stefania Nicoleta Motoc, Ruxandra Rajnoveanu, Doina Todea, Anca Mirela Stoia and Adina Milena Man
Microorganisms 2024, 12(12), 2439; https://doi.org/10.3390/microorganisms12122439 - 27 Nov 2024
Viewed by 336
Abstract
To date, the percentage composition of the lung microbiome in bronchopulmonary cancer has not been summarized. Existing studies on identifying the lung microbiome in bronchopulmonary cancer through 16S rRNA sequencing have shown variable results regarding the abundance of bacterial taxa. Objective: To identify [...] Read more.
To date, the percentage composition of the lung microbiome in bronchopulmonary cancer has not been summarized. Existing studies on identifying the lung microbiome in bronchopulmonary cancer through 16S rRNA sequencing have shown variable results regarding the abundance of bacterial taxa. Objective: To identify the predominant bacterial taxa at the phylum and genus levels in bronchopulmonary cancer using samples collected through bronchoalveolar lavage and to determine a potential proportional pattern that could contribute to the diagnosis of bronchopulmonary cancer. Data Sources: A systematic review of English articles using MEDLINE, Embase, and Web of Science. Search terms included lung microbiome, lung cancer, and bronchoalveolar lavage. Study Selection: Studies that investigated the lung microbiome in bronchopulmonary cancer with samples collected via bronchoalveolar lavage. Data Extraction: Independent extraction of articles using predefined data fields, including study quality indicators. Data Synthesis: Nine studies met the inclusion criteria, focusing on those that utilized a percentage expression of the microbiome at the phylum or genus level. There was noted heterogeneity between studies, both in terms of phylum and genus, with a relatively constant percentage of the Firmicutes phylum and the genera Streptococcus and Veillonella being mentioned. Significant differences were also observed regarding the inclusion criteria for study participants, the method of sample collection, and data processing. Conclusions: To date, there is no consistent percentage pattern at the phylum or genus level in bronchopulmonary cancer, with the predominance of a phylum or genus varying across different patient cohorts, resulting in non-overlapping outcomes. Full article
(This article belongs to the Section Medical Microbiology)
Show Figures

Figure 1

Figure 1
<p>Flow diagram.</p>
Full article ">
18 pages, 5230 KiB  
Article
Application of Semiconductor Technology for Piezoelectric Energy Harvester Fabrication
by Andrzej Kubiak, Nataliia Bokla, Tamara Klymkovych, Łukasz Ruta and Łukasz Bernacki
Energies 2024, 17(23), 5896; https://doi.org/10.3390/en17235896 - 24 Nov 2024
Viewed by 596
Abstract
In this paper, we propose the application of semiconductor technology processes to fabricate integrated silicon devices that demonstrate the piezoelectric energy harvesting effect. The harvesting structure converts thermal energy into electricity using a piezoelectric transducer, which generates electrical signals owing to the dynamic [...] Read more.
In this paper, we propose the application of semiconductor technology processes to fabricate integrated silicon devices that demonstrate the piezoelectric energy harvesting effect. The harvesting structure converts thermal energy into electricity using a piezoelectric transducer, which generates electrical signals owing to the dynamic bending under pressure caused by the explosive boiling of the working fluid within the harvester. The challenges of previous works that included complex manufacturing processing and form limitations were addressed by the use of semiconductor technology based on laser beam processing, which led to simplification of the device’s fabrication. The electrical characterization of the fabricated harvester prototype proved its functionality in energy conversion and potential for integration with a step-up converter or power management integrated circuit (PMIC) generating stable impulses ranging from 0.4 to 1.5 V at a frequency of 7 Hz. Full article
(This article belongs to the Section F: Electrical Engineering)
Show Figures

Figure 1

Figure 1
<p>Operational scheme of phase-transition-driven harvester.</p>
Full article ">Figure 2
<p>Stages in the fabrication of PEHs.</p>
Full article ">Figure 3
<p>Transverse of the PEHs; red frame indicates the location of the channel enabling the circulation of water between the evaporation chamber and condensing chamber.</p>
Full article ">Figure 4
<p>Distribution of mechanical stress (<b>a</b>) and electric potential in the piezoelectric shell (<b>b</b>).</p>
Full article ">Figure 5
<p>The dependence of pressure on the quantity of water (<b>a</b>) and temperature (<b>b</b>).</p>
Full article ">Figure 6
<p>PEHs components: evaporation chamber (1), channel (2), condensation chamber (3), and upper cover (4); various channel realizations (marked red) included design based on multichannel (<b>A</b>), single-channel (<b>B</b>) and thinned single-channel approach (<b>C</b>).</p>
Full article ">Figure 7
<p>Fabrication process and fabricated PEH device (<b>a</b>) Si (evaporation chamber) (<b>b</b>) Si + SU-8 (<b>c</b>) Si + SU-8 + channel (<b>d</b>) Si (condensation chamber) (<b>e</b>) Si + SU-8 + channel+ upper cover (<b>f</b>) Si +liquid (<b>g</b>) Si + SU-8 + PZT 7BB-15-6 (<b>h</b>) SU-8 + upper cover (<b>i</b>) final structure.</p>
Full article ">Figure 8
<p>Diagram of the test bench for PEH validation: (1) temperature of the heatsink <span class="html-italic">T<sub>ch</sub></span>; (2) temperature of the cold side <span class="html-italic">T<sub>c</sub></span>; (3) output <span class="html-italic">t<sub>H</sub></span> of the harvester <span class="html-italic">V<sub>p</sub></span>; (4) temperature of the hot side <span class="html-italic">T<sub>h</sub></span>; (5) temperature hotplate (cooper); (6) piezo harvester; (7) Stuart D160 Digital Hotplate; (8) copper rod; (9) data acquisition system NI USB-6211; (10) thermal isolation.</p>
Full article ">Figure 9
<p>Digital output signals <span class="html-italic">V<sub>p</sub></span>(<span class="html-italic">t</span>) collected during PEH operation with filling degree α: (<b>a</b>) 10%, (<b>b</b>) 20%, and (<b>c</b>) 30%.</p>
Full article ">Figure 10
<p>FFT frequency analysis of the excitation signal with filling degree α: (<b>a</b>) 10%, (<b>b</b>) 20%, and (<b>c</b>) 30%.</p>
Full article ">Figure 10 Cont.
<p>FFT frequency analysis of the excitation signal with filling degree α: (<b>a</b>) 10%, (<b>b</b>) 20%, and (<b>c</b>) 30%.</p>
Full article ">Figure 11
<p>Spectrogram images obtained from STFT analysis of Vp with filling degree α: (<b>a</b>) 10%, (<b>b</b>) 20%, and (<b>c</b>) 30%.</p>
Full article ">
27 pages, 7620 KiB  
Article
Maturity Prediction in Soybean Breeding Using Aerial Images and the Random Forest Machine Learning Algorithm
by Osvaldo Pérez, Brian Diers and Nicolas Martin
Remote Sens. 2024, 16(23), 4343; https://doi.org/10.3390/rs16234343 - 21 Nov 2024
Viewed by 458
Abstract
Several studies have used aerial images to predict physiological maturity (R8 stage) in soybeans (Glycine max (L.) Merr.). However, information for making predictions in the current growing season using models fitted in previous years is still necessary. Using the Random Forest machine [...] Read more.
Several studies have used aerial images to predict physiological maturity (R8 stage) in soybeans (Glycine max (L.) Merr.). However, information for making predictions in the current growing season using models fitted in previous years is still necessary. Using the Random Forest machine learning algorithm and time series of RGB (red, green, blue) and multispectral images taken from a drone, this work aimed to study, in three breeding experiments of plant rows, how maturity predictions are impacted by a number of factors. These include the type of camera used, the number and time between flights, and whether models fitted with data obtained in one or more environments can be used to make accurate predictions in an independent environment. Applying principal component analysis (PCA), it was found that compared to the full set of 8–10 flights (R2 = 0.91–0.94; RMSE = 1.8–1.3 days), using data from three to five fights before harvest had almost no effect on the prediction error (RMSE increase ~0.1 days). Similar prediction accuracy was achieved using either a multispectral or an affordable RGB camera, and the excess green index (ExG) was found to be the important feature in making predictions. Using a model trained with data from two previous years and using fielding notes from check cultivars planted in the test season, the R8 stage was predicted, in 2020, with an error of 2.1 days. Periodically adjusted models could help soybean breeding programs save time when characterizing the cycle length of thousands of plant rows each season. Full article
Show Figures

Graphical abstract

Graphical abstract
Full article ">Figure 1
<p>Pipeline workflow diagram of a high-throughput phenotyping platform for predicting soybean physiological maturity (R8 stage) of three breeding experiments (2018–2020) containing trials divided into plant rows of F<sub>4:5</sub> experimental lines grown at the University of Illinois Research and Education Center near Savoy, IL. On the top right, overlapped on the satellite image, © Google, 2024 [<a href="#B31-remotesensing-16-04343" class="html-bibr">31</a>], three selected orthophotos corresponding to these experiments were taken from a drone on the same flight date (10 September). The colored polygons indicate the effective area of the soybean breeding blocks (trials) for which physiological maturity was predicted. The magnified orthophoto (10 September 2019) shows the cell grid that was used to associate the pixels within each cell to the day of the year in which the plant row reached the R8 stage.</p>
Full article ">Figure 2
<p>Partial visualization of composed orthophotos obtained from time series of images taken from a drone flying over three soybean breeding experiments (2018–2020). The experiments, containing plant rows of F<sub>4:5</sub> experimental lines, were grown at the University of Illinois Research and Education Center near Savoy, IL. The imagery was collected in a total of eight flight dates in 2018, ten in 2019, and nine in 2020, although only four flight dates per year are shown according to the best matching day of the year. The raster information within each cell grid was used to predict the day of the year the plant row reached physiological maturity. All the orthophotos show the three visual spectral bands (red, green, and blue); however, while the images were taken with a digital RGB camera in 2018, in 2019 and 2020, they were with a multispectral camera of five bands: red, green, blue, red edge, and near-infrared.</p>
Full article ">Figure 3
<p>The histograms (in green) show the distribution of soybean physiological maturity (R8 stage) dates for three experiments of plant rows of F<sub>4:5</sub> experimental lines grown at the University of Illinois Research and Education Center near Savoy, IL (2018–2020). The histograms (in blue) also show the distribution of the R8 stage dates, but according to what plant rows were assigned per individual (A–F) to take the field notes.</p>
Full article ">Figure 4
<p>The boxplots show the bias of predictions (days) for soybean physiological maturity (R8 stage) according to the individuals (A–F) who together took 9252, 11,742, and 11,197 field notes from three experiments: 2018 (<b>top</b>), 2019 (<b>middle</b>), and 2020 (<b>bottom</b>), respectively. The experiments contained plant rows of F<sub>4:5</sub> experimental lines grown at the University of Illinois Research and Education Center near Savoy, IL. The Random Forest algorithm was used to adjust the predictive models using different training data sizes according to what plant rows were assigned per individual (A–F). The empty boxplot spaces mean that 44.2%, 28.5%, and 27.2% of field notes, taken respectively by A, B, and C, were used to train the models in 2018. In 2019, the proportions were 21.2%, 37.9%, 11.1%, 12.8%, and 17.0% (A, D–G); and in 2020, they were 45.3%, 19.6%, 17.5%, and 17.7% (A, B and C, D, and E).</p>
Full article ">Figure 5
<p>Soybean physiological maturity (R8 stage) predictions corresponding to three breeding experiments containing plant rows of F<sub>4:5</sub> experimental lines grown at the University of Illinois Research and Education Center near Savoy, IL (2018–2020). The Random Forest algorithm was applied to associate the field recorded values with three classification variables (breeding block, the individual who took the field notes, and the check cultivar) and 32 image features (red, green, blue, and a calculated excess green index —<span class="html-italic">ExG</span>—) obtained from eight drone flights. (<b>a</b>–<b>c</b>) The relationship between predicted vs. field recorded values using all the field records, and (<b>d</b>–<b>f</b>) the same, but after filtering records of plant rows that reached the R8 stage after the last drone flight date (26, 24, and 30 September, respectively, for 2018, 2019, and 2020). An equal relationship training:test data ratio (80:20) was maintained for the three experiments (<span class="html-italic">n</span> = test data). The deviation of the regression line (blue) from the 1:1 line (gray) indicates the model’s prediction bias.</p>
Full article ">Figure 6
<p>Variable importance measure of 15 most relevant variables for predicting soybean physiological maturity (R8 stage) of three experiments containing plant rows of F<sub>4:5</sub> experimental lines grown at the University of Illinois Research and Education Center near Savoy, IL. Spectral bands extracted from time series of images taken from a drone and the excess green index (<span class="html-italic">ExG</span>) were included in the models as explanatory variables with three other classification variables: the breeding block (Block), the individual who took the field notes (Ind.), and the check cultivar (that does not show relevant importance). In 2018, the images were taken from a drone with a digital RGB (red, green, blue) camera, whereas in 2019 and 2020, they were taken with a multispectral camera. For the latter two years, the analyses were divided into using only the red (R), green (G), and blue (B) bands (simulating a digital RGB camera) and using the five spectral bands: R, G, B, R edge, and near-infrared (NIR).</p>
Full article ">Figure 7
<p>Principal component analysis (PCA) of 32 variables belonging to a time series of RGB (red, green, blue) images and a calculated excess green index (<span class="html-italic">ExG</span>). The images were taken across eight drone flights carried out over a soybean breeding experiment (planted on 22 May 2018) containing plant rows of F<sub>4:5</sub> experimental lines grown at the University of Illinois Research and Education Center near Savoy, IL. (<b>a</b>) Shows a regression analysis between PC1 scores and soybean physiological maturity (R8 stage); and (<b>b</b>) <span class="html-italic">a posteriori</span> association between the response variable (R8 stage) and the image features, where A and S indicate August and September 2018, respectively.</p>
Full article ">Figure 8
<p>Soybean physiological maturity (R8 stage) predictions for 2020 using four models trained with data from field recorded values collected from two previous experiments (2018–2019). The three experiments corresponded to breeding experiments containing plant rows of F<sub>4:5</sub> experimental lines grown at the University of Illinois Research and Education Center near Savoy, IL. The four models were adjusted by applying the Random Forest algorithm to associate the field recorded values with a time series of the excess green index (<span class="html-italic">ExG</span>) and three classification variables (breeding block, the individual who took the field notes, and the check cultivar). Calculated from the red, green, and blue spectral bands, <span class="html-italic">ExG</span> was obtained from digital images taken with a drone. The four models were adjusted using the following training: test data relationship: (<b>a</b>) Training 2019:Test 2020 (<span class="html-italic">n</span> = 51:49); (<b>b</b>) Training 2019<sub>plus 2020 checks</sub>:Test 2020<sub>wihout checks</sub> (<span class="html-italic">n</span> = 53:47); (<b>c</b>) Training 2018–2019: Test 2020 (<span class="html-italic">n</span> = 65:35); and (<b>d</b>) Training 2018–2019<sub>plus 2020 checks</sub>:Test 2020<sub>wihout checks</sub> (<span class="html-italic">n</span> = 67:33). The deviation of the regression line (blue) from the 1:1 line (gray) indicates the model’s prediction bias. The table below the figures gives the data used to train the models in each figure (<b>a</b>–<b>d</b>).</p>
Full article ">Figure 9
<p>(<b>a</b>) Frequencies, (<b>b</b>) residuals, and (<b>c</b>) images showing prediction deviations for soybean physiological maturity (R8 stage) collected in a breeding experiment with plant rows of F<sub>4:5</sub> experimental lines in 2020. The mean residual (red line) indicates in (<b>b</b>) the prediction bias across time compared to predictions with zero bias from the observed R8 dates (gray dashed line). The images on the right show the excess green index (<span class="html-italic">ExG</span>), which is calculated with the red, green, and blue bands (images on the left). On the top of (<b>c</b>), the images show the three worst maturity predictions identified on (<b>b</b>); the bottom shows three examples considering predictions with an error of 2, 1, and 0 days from 30 September. The maturity predictions were carried out using a model (<a href="#remotesensing-16-04343-f008" class="html-fig">Figure 8</a>b) trained with data collected in a breeding experiment planted in 2019 (<span class="html-italic">n</span> = 11,197) and in the eight check cultivars replicated in the 2020 experiment. The 2020 experiment minus the checks (<span class="html-italic">n</span> = 11,197–493) was used to test the model, which was adjusted with the Random Forest algorithm using time series of <span class="html-italic">ExG</span> and three classification variables (breeding block, the individual who took the field notes, and the check cultivar).</p>
Full article ">
11 pages, 1191 KiB  
Article
A Prospective Study of Nephrocalcinosis in Very Preterm Infants: Incidence, Risk Factors and Vitamin D Intake in the First Month
by Rasa Garunkstiene, Ruta Levuliene, Andrius Cekuolis, Rimante Cerkauskiene, Nijole Drazdiene and Arunas Liubsys
Medicina 2024, 60(12), 1910; https://doi.org/10.3390/medicina60121910 - 21 Nov 2024
Viewed by 297
Abstract
Background and objectives: Nephrocalcinosis (NC) is a common condition characterized by the deposition of calcium salts in the kidneys of very preterm infants due to tubular immaturity, intensive treatment and nutritional supplements. However, optimal vitamin D supplementation remains unclear. In most patients, [...] Read more.
Background and objectives: Nephrocalcinosis (NC) is a common condition characterized by the deposition of calcium salts in the kidneys of very preterm infants due to tubular immaturity, intensive treatment and nutritional supplements. However, optimal vitamin D supplementation remains unclear. In most patients, NC spontaneously resolves within the first year of life, but long-term kidney function data are lacking. The aim was to study nephrocalcinosis in very preterm infants, assess risk factors and evaluate vitamin D’s impact during the first month with a 2-year follow-up. Material and Methods: This was a prospective observational study conducted over a 3-year period in infants with a gestational age of less than 32 weeks. The patients’ data were compared between the NC and control groups based on kidney ultrasound results at discharge. In the first month, the mean vitamin D intake from all sources as well as biochemical markers of calcium metabolism were collected. Patients diagnosed with NC were referred to a pediatric nephrologist after discharge. Results: NC was found in 35% of a cohort of 160 infants, more common in those with a gestational age <28 weeks. Risk factors were associated with higher morbidity and necessary treatment. At 28 days, serum 25-hydroxy vitamin D levels differed between NC and control groups (p < 0.05). The NC group with GA ≥ 28 weeks had higher vitamin D intake (p < 0.05), hypercalciuria and calcium/creatinine ratio (p < 0.01) and lower parathyroid hormone levels (p < 0.05). Follow-up showed resolution in 70% at 12 months and 90% at 24 months. Conclusions: The prevalence of NC in very preterm infants is significant, associated with lower maturity and higher morbidity. Careful vitamin D supplementation and biochemical monitoring of Ca metabolism from the first month of life should support bone health and limit the risk of nephrocalcinosis. Due to the high incidence of NC in very preterm infants, long-term follow-up is essential. Full article
(This article belongs to the Section Pediatrics)
Show Figures

Figure 1

Figure 1
<p>Flow chart.</p>
Full article ">Figure 2
<p>Average vitamin D intake in µg/kg during the first 28 days (5 µg—200 IU). Serum 25(OH)D—serum 25-hydroxyvitamin D; d.—days. Different symbols for control ● and nephrocalcinosis ▲ groups. Serum 25(OH)D levels at 30 and 50 ng/mL (optimal concentration) are marked as dotted lines.</p>
Full article ">Figure 3
<p>Probability of nephrocalcinosis by gestational age and the mean daily intake of vitamin D. Gestational groups (&lt;28 weeks and ≥28 weeks of gestational age) are presented with different line types.</p>
Full article ">Figure 4
<p>A decreasing trend in the probability of nephrocalcinosis for gestational age is observed when parathyroid hormone (at 28 days of life) increases. iPTH—intact parathyroid hormone. Gestational groups (&lt;28 weeks and ≥28 weeks of gestational age) are presented with different line types.</p>
Full article ">
14 pages, 1007 KiB  
Article
Insights into the Risk Factors and Outcomes of Post-COVID-19 Syndrome—Results from a Retrospective, Cross-Sectional Study in Romania
by Ioana Bejan, Corneliu Petru Popescu and Simona Maria Ruta
Life 2024, 14(11), 1519; https://doi.org/10.3390/life14111519 - 20 Nov 2024
Viewed by 1474
Abstract
Post-Coronavirus Disease 2019 (post-COVID-19) syndrome represents a cluster of persistent symptoms following Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) infection that can severely affect quality of life. The pathogenic mechanisms and epidemiology in different regions are still under evaluation. To assess the outcomes [...] Read more.
Post-Coronavirus Disease 2019 (post-COVID-19) syndrome represents a cluster of persistent symptoms following Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) infection that can severely affect quality of life. The pathogenic mechanisms and epidemiology in different regions are still under evaluation. To assess the outcomes of post-COVID-19 syndrome, we performed a questionnaire-based, cross-sectional study in previously infected individuals. Out of 549 respondents, (male:female ratio: 0.32), 29.5% had persistent symptoms at 3 months, 23.5% had persistent symptoms at 6 months, and 18.3% had persistent symptoms at 12 months after the initial infection. The most common symptoms included fatigue (8.7%), sleep disturbances (7.1%), and cognitive impairment (6.4%). The risk of developing post-COVID-19 syndrome increased for those with more symptoms in the acute phase (OR 4.24, p < 0.001) and those experiencing reinfections (OR 2.405, p < 0.001), while SARS-CoV-2 vaccination halved the risk (OR = 0.489, p = 0.004). Individuals with post-COVID-19 syndrome had a 5.7-fold higher risk of being diagnosed with a new chronic condition, with 44% reporting cardiovascular disease, and a 6.8-fold higher likelihood of needing medical care or leave. Affected individuals reported significant impairments in mobility, pain/discomfort, and anxiety/depression, with 20.7% needing to adjust their work schedules. Overall, patients with post-COVID-19 syndrome require ongoing monitoring and rehabilitation, and further socio-economic impact studies are needed. Full article
(This article belongs to the Special Issue Human Health Before, During, and After COVID-19)
Show Figures

Figure 1

Figure 1
<p>SARS-CoV-2 infections reported in the study cohort throughout the pandemic and the dominant viral variant at that time in Romania.</p>
Full article ">Figure 2
<p>Impact of the different risk factors on the development of post-COVID-19 syndrome. (<b>A</b>) number of symptoms during the acute phase of the infection, (<b>B</b>) number of pre-infection comorbidities, (<b>C</b>) vaccination status.</p>
Full article ">Figure 2 Cont.
<p>Impact of the different risk factors on the development of post-COVID-19 syndrome. (<b>A</b>) number of symptoms during the acute phase of the infection, (<b>B</b>) number of pre-infection comorbidities, (<b>C</b>) vaccination status.</p>
Full article ">Figure 3
<p>Average self-assessed health status for five areas of quality of life: Panel (<b>A</b>)—Pre-infection with SARS-CoV-2—comparison between subjects later diagnosed with long COVID and those unaffected; Panel (<b>B</b>)—Post-infection with SARS-CoV-2—comparison between subjects later diagnosed with long COVID and those unaffected, adapted from the EuroQoL 5D-3L scale [<a href="#B13-life-14-01519" class="html-bibr">13</a>]. Attributable scores ranged from 1—complete independence and lack of discomfort to 3—severe problems in the specified category.</p>
Full article ">
19 pages, 10393 KiB  
Article
Miniaturized Shear Testing: In-Plane and Through-Thickness Characterization of Plywood
by Víctor Tuninetti, Moisés Sandoval, Juan Pablo Cárdenas-Ramírez, Angelo Oñate, Alejandra Miranda, Paula Soto-Zúñiga, Michael Arnett, Jorge Leiva and Rodrigo Cancino
Materials 2024, 17(22), 5621; https://doi.org/10.3390/ma17225621 - 18 Nov 2024
Viewed by 415
Abstract
This study addresses the challenges associated with conventional plywood shear testing by introducing a novel miniaturized shear test method. This approach utilizes a controlled router toolpath for precise sample fabrication, enabling efficient material use and data acquisition. Miniaturized samples, designed with double shear [...] Read more.
This study addresses the challenges associated with conventional plywood shear testing by introducing a novel miniaturized shear test method. This approach utilizes a controlled router toolpath for precise sample fabrication, enabling efficient material use and data acquisition. Miniaturized samples, designed with double shear zones, were tested for τxy, τxz, and τyz configurations using a universal testing machine. Results revealed a mean ultimate shear strength ranging from 5.6 MPa to 7.3 MPa and a mean shear modulus ranging from 0.039 GPa to 0.095 GPa, confirming the orthotropic nature of plywood. The resulting shear behavior was determined with stress–strain curves correlated with failure patterns. The miniaturized tests effectively captured the material’s heterogeneous behavior, particularly at smaller scales, and demonstrated consistent load-bearing capacity even after substantial stress reduction, suggesting suitability for bracing applications. This method allows for increased sample sizes, facilitating robust data collection for developing and validating finite element models. Future work will focus on evaluating the scalability of the observed orthotropic behavior and data scatter at larger scales and assessing the potential for this method to replace conventional full-scale plywood shear testing. Full article
Show Figures

Figure 1

Figure 1
<p>Specimen geometries for shear testing under different loads (arrows): (<b>a</b>) ASTM B831 standard [<a href="#B39-materials-17-05621" class="html-bibr">39</a>,<a href="#B47-materials-17-05621" class="html-bibr">47</a>], (<b>b</b>) Miyauchi [<a href="#B46-materials-17-05621" class="html-bibr">46</a>], (<b>c</b>) Iosipescu [<a href="#B48-materials-17-05621" class="html-bibr">48</a>], (<b>d</b>) short flexural beam, (<b>e</b>) block type (ASTM D143 [<a href="#B49-materials-17-05621" class="html-bibr">49</a>]; ASTM D905 [<a href="#B50-materials-17-05621" class="html-bibr">50</a>]; ASTM D1037 [<a href="#B35-materials-17-05621" class="html-bibr">35</a>]), (<b>f</b>) two- and three-rail device [<a href="#B35-materials-17-05621" class="html-bibr">35</a>], (<b>g</b>) ASTM D3518 (45° off-axis tensile) [<a href="#B51-materials-17-05621" class="html-bibr">51</a>,<a href="#B52-materials-17-05621" class="html-bibr">52</a>], and (<b>h</b>) Arcan fixture [<a href="#B53-materials-17-05621" class="html-bibr">53</a>,<a href="#B54-materials-17-05621" class="html-bibr">54</a>,<a href="#B55-materials-17-05621" class="html-bibr">55</a>].</p>
Full article ">Figure 2
<p>(<b>a</b>) Orthogonal directions in plywood panel. (<b>b</b>) Shear components of the stress tensor in Cartesian coordinates on a representative thickness element of the plywood panel.</p>
Full article ">Figure 3
<p>Proposed geometry for the in-plane shear test samples: (<b>a</b>) front view of τ<sub>xy</sub>, (<b>b</b>) front view of τ<sub>yx</sub>, (<b>c</b>) top view, and (<b>d</b>) isometric view of the samples.</p>
Full article ">Figure 4
<p>Proposed geometry for through-thickness shear test samples: (<b>a</b>) top view for τ<sub>xz</sub>, (<b>b</b>) top view for τ<sub>yz</sub>, (<b>c</b>) front view, and (<b>d</b>) isometric view of the assembly (right), including the outer lower piece and inner upper piece (left) and the piece with a notch in the test zone (middle).</p>
Full article ">Figure 5
<p>Mounting of the manufactured shear samples on a universal testing machine with compression plates in the τ<sub>xy</sub>, τ<sub>yx</sub>, τ<sub>xz</sub>, and τ<sub>yz</sub> directions.</p>
Full article ">Figure 6
<p>Toolpaths used for the fabrication of shear samples via a CNC router: (<b>a</b>) aamples for shear testing in xy–yx direction, and (<b>b</b>) samples for xz–yz shear direction.</p>
Full article ">Figure 7
<p>Type of samples prepared for shear tests in the direction of stress–strain: (<b>a</b>) τ<sub>xy</sub>, (<b>b</b>) τ<sub>yx</sub>, (<b>c</b>) τ<sub>xz</sub>, and (<b>d</b>) τ<sub>yz</sub>.</p>
Full article ">Figure 8
<p>Deformation evolution at 30%, 40%, and 50% shear strain reflects the failure modes in the three tested orthotropic directions (τ<sub>xy</sub>, τ<sub>xz</sub>, and τ<sub>yz</sub>) for 18 mm thick plywood panels. The shear test in the τ<sub>yx</sub> plane is also included for comparison with τ<sub>xy</sub>.</p>
Full article ">Figure 9
<p>Shear stress–strain curves of plywood of investigated samples F1 and F2: (<b>a</b>) τ<sub>xy</sub>, (<b>b</b>) τ<sub>yx</sub>, (<b>c</b>) τ<sub>xz</sub> and, (<b>d</b>) τ<sub>yz</sub>, (<b>e</b>) average curves of the damage zone and, (<b>f</b>) average curves until the maximum shear stress.</p>
Full article ">
19 pages, 2453 KiB  
Article
Chemical Characterization and Biological Activities of a Beverage of Zuccagnia punctata, an Endemic Plant of Argentina with Blueberry Juice and Lemon Honey
by Florencia María Correa Uriburu, Iris Catiana Zampini, Luis María Maldonado, Milagros Gómez Mattson, Daniela Salvatori and María Inés Isla
Plants 2024, 13(22), 3143; https://doi.org/10.3390/plants13223143 - 8 Nov 2024
Viewed by 474
Abstract
In this study, the production of functional beverages of Zuccagnia punctata Cav. (jarilla), a native medicinal plant from Argentina, and Vaccinium corymbosum (blueberry), with lemon honey as a sweetener, is described. The beverage was formulated by using jarilla extract and blueberry juice with [...] Read more.
In this study, the production of functional beverages of Zuccagnia punctata Cav. (jarilla), a native medicinal plant from Argentina, and Vaccinium corymbosum (blueberry), with lemon honey as a sweetener, is described. The beverage was formulated by using jarilla extract and blueberry juice with maltodextrin as an encapsulant material. The beverage was dried by both spray-drying and freeze-drying. Both beverages showed high water solubility with adequate features for handling, transport, and storage. The chromatic parameters indicate tones of mauve. Both the total polyphenol and flavonoid contents were retained after being spray-dried (92 and 100%, respectively). The anthocyanins were less stable under spray-dried conditions (58% retained). Both beverages showed high scavenger capacity on ABTS•+, HO, and H2O2 (SC50 between 3.56 and 36.90 µg GAE/mL) and exhibited in vitro inhibitor potential of α-glucosidase, α-amylase, and lipase activities (IC50 of between 2.97 and 27.19 µg GAE/mL). The powdered beverage obtained by spray-drying presented the greatest preference in sensory tests. The beverages were neither toxic nor mutagenic in the concentration range with biological activity. During short-term storage, both beverages showed stability. The results obtained would support the use of a powdered beverage made from an Argentinean native plant and blueberries as a functional food. Full article
(This article belongs to the Section Phytochemistry)
Show Figures

Figure 1

Figure 1
<p>Photography of <span class="html-italic">Zuccagnia punctata</span> Cav., at the collection site (Amaicha del Valle, Tucumán, Argentina).</p>
Full article ">Figure 2
<p>HPLC DAD profile of (<b>A</b>) <span class="html-italic">Z. punctata</span> extract showing (1) 2′,4′-dihydroxychalcone (DHC), and (2) 2′,4′-dihydroxy-3′-methoxy chalcone (DHMC) and (<b>B</b>) hesperidin in lemon honey.</p>
Full article ">Figure 3
<p>Beverages dried by (<b>A</b>) spray-drying; (<b>B</b>) freeze-drying.</p>
Full article ">Figure 4
<p>SEM micrographs of beverage spray-dried at 2500× (<b>A</b>) and freeze-dried at 800× (<b>B</b>).</p>
Full article ">Figure 5
<p>(<b>A</b>) Powdered beverages reconstituted in water presented to the panel of tasters for sensory evaluation. Sample 105: freeze-dried beverage; Sample 215: spray-dried beverage. (<b>B</b>)—Acceptance profile of beverage evaluated with the hedonic scale. Powdered beverage obtained by freeze-drying (blue line) and by spray-drying (pink line).</p>
Full article ">
21 pages, 6371 KiB  
Article
Ruta graveolens Plant Extract as a Green Corrosion Inhibitor for 304 SS in 1 M HCl: Experimental and Theoretical Studies
by Sonia Estefanía Hernández-Sánchez, Juan Pablo Flores-De los Rios, Humberto Alejandro Monreal-Romero, Norma Rosario Flores-Holguin, Luz María Rodríguez-Valdez, Mario Sánchez-Carrillo, Anabel D. Delgado and Jose G. Chacón-Nava
Metals 2024, 14(11), 1267; https://doi.org/10.3390/met14111267 - 8 Nov 2024
Viewed by 594
Abstract
This study evaluated the corrosion inhibitory effects of Ruta graveolens leaf extract for 304 stainless steel in 1 M HCl. The analysis of the leaf extract using HPLC indicated that the primary compounds present in the leaf extract were rutin, caffeic acid, p-coumaric [...] Read more.
This study evaluated the corrosion inhibitory effects of Ruta graveolens leaf extract for 304 stainless steel in 1 M HCl. The analysis of the leaf extract using HPLC indicated that the primary compounds present in the leaf extract were rutin, caffeic acid, p-coumaric acid, and apigenin. The inhibition efficiency (IE%) of the extract was studied using weight loss, potentiodynamic polarization, electrochemical impedance spectroscopy (EIS), and computational simulation (density functional theory, DFT). The effects of the inhibitor concentration and solution temperature were investigated. The results indicated that the IE% increased for increasing concentrations of the extract, while the reverse was true with increasing temperatures. At 25 °C and a 600 ppm extract concentration, the results indicated a maximum inhibition efficiency of 95%, 98%, and 96% by weight loss, potentiodynamic polarization, and EIS techniques, respectively. SEM observations showed a significant change in the surface morphology of the 304 SS with and without the addition of the inhibitor compound. At all temperatures, the adsorption of the inhibitor components onto the 304 SS surface was found to follow the Langmuir isotherm model, and the inhibition process was governed by physical adsorption. Furthermore, chemical interactions between the inhibitor and the 304 SS steel surface were elucidated via density functional theory (DFT) calculations. Full article
(This article belongs to the Special Issue Recent Advances in Corrosion and Protection of Metallic Materials)
Show Figures

Figure 1

Figure 1
<p>Chromatogram of <span class="html-italic">Ruta graveolens</span> extract showing the detected compounds: (<b>1</b>) rutin, (<b>2</b>) caffeic acid, (<b>3</b>) p-coumaric acid, and (<b>4</b>) apigenin.</p>
Full article ">Figure 2
<p>Plots of (<b>a</b>) weight loss vs. immersion time and (<b>b</b>) efficiency percentage vs. time for the corrosion of 304SS without and with various concentrations of <span class="html-italic">Ruta graveolens</span> extract in 1 M HCl at 25 °C.</p>
Full article ">Figure 3
<p>Plots of (<b>a</b>) weight loss vs. immersion time and (<b>b</b>) efficiency percentage vs. time for the corrosion of 304 SS without and with various concentrations of <span class="html-italic">Ruta graveolens</span> extract in 1 M HCl at 40 °C.</p>
Full article ">Figure 4
<p>Plots of (<b>a</b>) weight loss vs. immersion time and (<b>b</b>) efficiency percentage vs. time for the corrosion of 304 SS without and with various concentrations of <span class="html-italic">Ruta graveolens</span> extract in 1 M HCl at 60 °C.</p>
Full article ">Figure 5
<p>Polarization curves for 304 SS in 1 M HCl solution for different concentrations of <span class="html-italic">Ruta graveolens</span> extract at (<b>a</b>) 25 °C, (<b>b</b>) 40 °C, and (<b>c</b>) 60 °C.</p>
Full article ">Figure 6
<p>Nyquist plots for 304 SS in 1.0 M HCl containing 150 ppm, 300 ppm, 450 ppm, and 600 ppm of <span class="html-italic">Ruta graveolens</span> extract at (<b>a</b>) 25 °C, (<b>b</b>) 40 °C, and (<b>c</b>) 60 °C.</p>
Full article ">Figure 7
<p>Randles equivalent circuit model for the <span class="html-italic">Ruta graveolens</span> inhibitor studied.</p>
Full article ">Figure 8
<p>SEM images of samples exposed to 1 M HCl medium in the absence and presence of <span class="html-italic">Ruta graveolens</span> extract at a concentration of 600 ppm at 25 °C (<b>a</b>,<b>b</b>), 40 °C (<b>c</b>,<b>d</b>), and 60 °C (<b>e</b>,<b>f</b>).</p>
Full article ">Figure 9
<p>Langmuir adsorption plot of 304 SS in a 1 M HCl solution containing different concentrations of <span class="html-italic">Ruta graveolens</span>.</p>
Full article ">Figure 10
<p>B3LYP/6-311G (d,p) optimized structures and HOMO and LUMO distributions for the components in <span class="html-italic">Ruta graveolens</span>: rutin, caffeic acid, p-coumaric acid, and apigenin.</p>
Full article ">
13 pages, 1975 KiB  
Article
Optimization of the Production of Secondary Metabolites from Furanocoumarin and Furoquinoline Alkaloid Groups in In Vitro Ruta corsica Cultures Grown in Temporary Immersion Bioreactors
by Agnieszka Szewczyk, Monika Trepa and Dominika Zych
Molecules 2024, 29(22), 5261; https://doi.org/10.3390/molecules29225261 - 7 Nov 2024
Viewed by 499
Abstract
Ruta corsica is a rare and endemic plant native to Corsica. Due to its limited distribution and the priority to preserve natural sites, has been insufficiently studied. In vitro cultures provide an opportunity to research R. corsica under controlled conditions. In the present [...] Read more.
Ruta corsica is a rare and endemic plant native to Corsica. Due to its limited distribution and the priority to preserve natural sites, has been insufficiently studied. In vitro cultures provide an opportunity to research R. corsica under controlled conditions. In the present study, in vitro cultures of R. corsica were conducted in PlantformTM bioreactors. The study aimed to assess the effects of growth cycle length (5 and 6 weeks) and different concentrations of plant growth regulators (NAA and BAP) at 0.1/0.1, 0.1/0.5, 0.5/0.5, 0.5/1.0, and 1.0/1.0 mg/L on biomass growth and secondary metabolite accumulation. HPLC analysis identified compounds in the furanocoumarin and furoquinoline alkaloid groups, with furanocoumarins being the primary secondary metabolites (maximum total content: 1571.5 mg/100 g DW). Among them, xanthotoxin, psoralen, and bergapten were dominant, with maximum concentrations of 588.1, 426.6, and 325.2 mg/100 g DW, respectively. The maximum total content of furoquinoline alkaloids was 661 mg/100 g DW, with γ-fagarine as the primary metabolite, reaching 448 mg/100 g DW. The optimal conditions for secondary metabolite accumulation in R. corsica cultures were a 5-week growth cycle and the LS 0.1/0.1 medium variant. Full article
Show Figures

Figure 1

Figure 1
<p><span class="html-italic">R. corsica</span> cultures maintained in Plantform<sup>TM</sup> bioreactor (LS 0.1/0.1 medium, 5-week growth cycle).</p>
Full article ">Figure 2
<p>Results of dry weight DW [g] of R. corsica cultures grown in Plantform<sup>TM</sup> bioreactors, two cultivation cycles (5 and 6 weeks), and 5 variants of LS medium with NAA/BAP ratio equal to 0.1/0.1, 0.1/0.5, 0.5/0.5, 0.5/1.0, and 1.0/1.0 mg/L, respectively. Means of three replicates ± SD. Letters a–e indicate significant differences at <span class="html-italic">p</span> &lt; 0.05.</p>
Full article ">Figure 3
<p>Chemical structures of analyzed secondary metabolites.</p>
Full article ">Figure 4
<p>Total content of furanocoumarins [mg/g DW]. <span class="html-italic">R. corsica</span> cultures grown in Plantform<sup>TM</sup> bioreactors, two cultivation cycles (5 and 6 weeks), and 5 variants of LS medium with NAA/BAP ratio equal to 0.1/0.1, 0.1/0.5, 0.5/0.5, 0.5/1.0, and 1.0/1.0 mg/L, respectively.</p>
Full article ">Figure 5
<p>Total furoquinoline alkaloids [mg/100 g DW] obtained from <span class="html-italic">R. corsica</span> cultures grown in Plantform<sup>TM</sup> bioreactors, two cultivation cycles (5 and 6 weeks) and 5 variants of LS medium with NAA/BAP ratio equal to 0.1/0.1, 0.1/0.5, 0.5/0.5, 0.5/1.0, and 1.0/1.0 mg/L, respectively.</p>
Full article ">
10 pages, 668 KiB  
Article
Impact of Ambient Air Pollution with PM2.5 on Stroke Occurrence: Data from Kaunas (Lithuania) Stroke Register (2010–2022)
by Ruta Ustinaviciene, Jone Venclovienė, Dalia Luksiene, Abdonas Tamosiunas, Erika Jasukaitiene, Sarunas Augustis, Vidmantas Vaiciulis, Gintarė Kaliniene and Ricardas Radisauskas
Atmosphere 2024, 15(11), 1327; https://doi.org/10.3390/atmos15111327 - 4 Nov 2024
Viewed by 561
Abstract
Background: Ambient particulate matter of ≤2.5 μm in diameter (PM2.5) is named as a risk factor for cerebrovascular diseases. This investigation aimed to evaluate the impact of ambient air pollution with PM2.5 on stroke occurrence. Methods: The study was performed [...] Read more.
Background: Ambient particulate matter of ≤2.5 μm in diameter (PM2.5) is named as a risk factor for cerebrovascular diseases. This investigation aimed to evaluate the impact of ambient air pollution with PM2.5 on stroke occurrence. Methods: The study was performed in Kaunas, Lithuania, from 2010 to 2022. The daily numbers of ISs, subarachnoid hemorrhages (SAHs), and intracerebral hemorrhages (ICHs) were obtained from the Kaunas Stroke Register. The association between stroke occurrence and PM2.5 exposure was assessed by time- and seasonally stratified Poisson regression. Results: Among middle-aged persons, 3377 had a stroke, of which 2686 (79.5%) had an IS, 469 (13.9%) had an ICH, and 222 (6.6%) had SAH. The relative risk (RR) of SAH was increased by 1.7% with an increase in daily PM2.5 by 1 μg/m3 on the same day and at a lag of 1 day, and by 2.2% with an increase in mean PM2.5 concentration at a lag 0–1 days by 1 μg/m3. The RR of having a SAH was increased by 0.7% with an increase in daily PM2.5 by 1 μg/m3 on the same day. Conclusions: Significant associations between stroke occurrence and air pollution with PM2.5 were found in the SAH and HS patients, and only in middle-aged subjects. Full article
(This article belongs to the Special Issue New Insights into Ambient Air Pollution and Human Health)
Show Figures

Figure 1

Figure 1
<p>The mean PM<sub>2.5</sub> trend in Kaunas ambient air for 2010–2022 (R<sup>2</sup> = 0.449).</p>
Full article ">Figure 2
<p>The mean PM<sub>2.5</sub> max. trend in Kaunas ambient air for 2010–2022 (R<sup>2</sup> = 0.546).</p>
Full article ">
22 pages, 4569 KiB  
Article
Ruta graveolens, but Not Rutin, Inhibits Survival, Migration, Invasion, and Vasculogenic Mimicry of Glioblastoma Cells
by Iolanda Camerino, Paola Franco, Adriana Bajetto, Stefano Thellung, Tullio Florio, Maria Patrizia Stoppelli and Luca Colucci-D’Amato
Int. J. Mol. Sci. 2024, 25(21), 11789; https://doi.org/10.3390/ijms252111789 - 2 Nov 2024
Viewed by 940
Abstract
Glioblastoma (GBM) is the most aggressive type of brain tumor, characterized by poor outcome and limited therapeutic options. During tumor progression, GBM may undergo the process of vasculogenic mimicry (VM), consisting of the formation of vascular-like structures which further promote tumor aggressiveness and [...] Read more.
Glioblastoma (GBM) is the most aggressive type of brain tumor, characterized by poor outcome and limited therapeutic options. During tumor progression, GBM may undergo the process of vasculogenic mimicry (VM), consisting of the formation of vascular-like structures which further promote tumor aggressiveness and malignancy. The resulting resistance to anti-angiogenetic therapies urges the identification of new compounds targeting VM. Extracts of natural plants may represent potential therapeutic tools. Among these, components of Ruta graveolens water extract (RGWE) display a wide range of biological activities. To test the effect of RGWE on human GBM and rat glioma cell line VM, tube formation on a gelled matrix was monitored. Quantitative assessment of VM formation shows the clear-cut inhibitory activity of RGWE. Unlike rutin, one of the most abundant extract components, the whole RGWE strongly reduced the migration and invasion of GBM tumor cells. Moreover, RGWE induced cell death of GBM patient-derived cancer stem cells and impaired VM at sub-lethal doses. Overall, our data reveal a marked RGWE-dependent inhibition of GBM cell survival, migration, invasion, and VM formation. Thus, the clear-cut ability of RGWE to counteract GBM malignancy deserves attention, holding the promise to bring natural products to clinical use, thus uncovering new therapeutic opportunities. Full article
Show Figures

Graphical abstract

Graphical abstract
Full article ">Figure 1
<p>Tube formation by HUVEC, U87-MG, and C6 cells. (<b>A</b>) Representative images of HUVEC cells cultured in polystyrene dishes with or without ECM (Geltrex<sup>TM</sup>). Images were obtained by analyzing cells under the Inverted Microscope Axiovert 25 at 5× magnification, scale bars: 50 µm. (<b>B</b>) Representative images of U87-MG GBM cells cultured in polystyrene dishes, in a bright field or stained with PAS. Images were obtained by analyzing cells under the Inverted Microscope Axiovert 25 at 10× magnification in a bright field (scale bars: 100 µm) or under the Inverted Microscope DMI Leica 6000 at 10× magnification, for PAS staining, scale bar: 500 µm. (<b>C</b>) Immunocytochemistry assay on C6 glioma cells stained with anti-VE-cadherin antibodies. Antibody positivity (arrows) was revealed by DAB chromogenic substrate. Controls were incubated with secondary Ab (IgG) to exclude false positive signals. Images were obtained by observing cells under the Inverted Microscope Axiovert 25 at 10× magnification, scale bars: 100 µm.</p>
Full article ">Figure 2
<p>Effect of <span class="html-italic">Ruta graveolens</span> on U87-MG tube formation. (<b>A</b>) Representative images of VM formation of U87-MG cells in control (ctrl) and in treated samples at the specified concentrations. Branching point number was evaluated in each well by using the Inverted Microscope Leica DMI 6000 at 10× magnification, scale bars: 250 µm. (<b>B</b>) Quantification of branching points, defined as the intersection of at least three points [<a href="#B19-ijms-25-11789" class="html-bibr">19</a>]. They were counted in each well and expressed as a percentage of the ctrl, taken as 100%. The cell rate viability was tested by an MTT assay (<b>C</b>) and Trypan blue exclusion test (<b>D</b>). ** <span class="html-italic">p</span>-value &lt; 0.005; *** <span class="html-italic">p</span>-value &lt; 0.001.</p>
Full article ">Figure 3
<p>Effect of <span class="html-italic">Ruta graveolens</span> on U87-MG cellular migration and invasion in wound healing assays and chemotaxis assays. (<b>A</b>) Representative photograms of U87-MG cellular migration in wound healing assay in controls (ctrl) and in treated samples at the specified concentrations within 24 h. The images were obtained using the Inverted Microscope Leica DMI 6000 at 10× magnification, scale bars: 250 µm. Wound widths were quantitated by averaging the measurement of the wound margin distance at three points for each well. Results are expressed as wound width, as a percentage of the initial distance at T0, taken as 100%. (<b>B</b>) Directional migration assay in Boyden chambers of U87-MG exposed to 1 mg/mL Bovine serum albumin (BSA), 5% fetal bovine serum (FBS), or to the indicated concentrations of RGWE. (<b>C</b>) Directional invasion assay in Boyden chambers of U87-MG exposed to 1 mg/mL BSA, 5% FBS, or to the indicated concentrations of RGWE. Migrated and invaded cells were counted and expressed as a percentage of the cells recovered in the absence of chemoattractant (random migration/invasion, respectively), taken as 100% (BSA). * <span class="html-italic">p</span>-value &lt; 0.05, ** <span class="html-italic">p</span>-value &lt; 0.005, *** <span class="html-italic">p</span>-value &lt; 0.001.</p>
Full article ">Figure 4
<p>Effect of rutin on U87-MG VM, migration, and invasion. (<b>A</b>) U87-MG cells were plated on Geltrex<sup>TM</sup>, exposed to the indicated concentrations of rutin or to the whole extract, and branching points were counted as described in the legend to <a href="#ijms-25-11789-f002" class="html-fig">Figure 2</a>. U87-MG cells were subjected to a migration assay (<b>B</b>) or to an invasion assay (<b>C</b>) in the presence of rutin at the specified concentrations, according to the procedure described in the legend to <a href="#ijms-25-11789-f003" class="html-fig">Figure 3</a>. ** <span class="html-italic">p</span>-value &lt; 0.005.</p>
Full article ">Figure 5
<p>Effect of <span class="html-italic">Ruta graveolens</span> on U251-MG VM and viability. (<b>A</b>) Representative images of VM formation by U251-MG cells in control (ctrl) and in treated samples at the specified concentrations. Images were obtained analyzing cells under the Inverted Microscope Axiovert 25 at 5× magnification, scale bars: 50 µm. (<b>B</b>) Branching point numbers were evaluated as described in the legend to <a href="#ijms-25-11789-f002" class="html-fig">Figure 2</a>. (<b>C</b>) Cell rate viability was tested by a Trypan blue assay. * <span class="html-italic">p</span>-value &lt; 0.05; *** <span class="html-italic">p</span>-value &lt; 0.001.</p>
Full article ">Figure 6
<p>Effect of <span class="html-italic">Ruta graveolens</span> on U251-MG migration and invasion. (<b>A</b>) Representative photograms of U251-MG cellular migration in wound healing assay in controls (ctrl) and in treated samples at the specified concentrations within 24 h. The images were obtained using the Inverted Microscope Axiovert 25 at 5× magnification, scale bars: 50 µm. Wound widths were quantified as specified in the legend to <a href="#ijms-25-11789-f003" class="html-fig">Figure 3</a>. (<b>B</b>) Analysis of U251-MG migration in Boyden chambers in the presence of the indicated concentrations of RGWEs, according to the procedure described in the legend to <a href="#ijms-25-11789-f003" class="html-fig">Figure 3</a>. (<b>C</b>) Analysis of U251-MG invasion in Boyden chambers in the presence of the indicated concentrations of RGWE, according to the procedure described in the legend to <a href="#ijms-25-11789-f003" class="html-fig">Figure 3</a>. * <span class="html-italic">p</span>-value &lt; 0.05, ** <span class="html-italic">p</span>-value &lt; 0.005, *** <span class="html-italic">p</span>-value &lt; 0.001.</p>
Full article ">Figure 7
<p>Effect of <span class="html-italic">Ruta graveolens</span> extract on C6 tube formation and wound healing closure. (<b>A</b>) Representative images of VM formation by C6 cells in control (ctrl) and in RGWE-treated samples at the specified concentrations. Branching point number was evaluated in each well by using the Inverted Microscope Axiovert 25 at 5× magnification, scale bars: 50 µm. (<b>B</b>) Quantification of branching points. (<b>C</b>) Cell rate viability of C6 exposed to the indicated concentrations of RGWEs for 24 h was tested by an MTT assay. (<b>D</b>) Representative photograms of C6 wound healing assay in control (ctrl) and in treated samples at the specified concentrations for 20 h. Images were analyzed under the Inverted Microscope Axiovert 25 at 5× magnification and wound widths were quantified as specified in the legend to <a href="#ijms-25-11789-f003" class="html-fig">Figure 3</a>. Scale bars: 50 µm. * <span class="html-italic">p</span>-value &lt; 0.05, *** <span class="html-italic">p</span>-value &lt; 0.001.</p>
Full article ">Figure 8
<p>Effect of <span class="html-italic">Ruta graveolens</span> on patient-derived GBM GSC survival. (<b>A</b>) Table reporting clinical characteristics of patients and tumors selected for the isolation of CSCs. Cell rate of GBM1 (<b>B</b>), GBM2 (<b>C</b>), and GBM3 (<b>D</b>) primary culture viability by MTT assay in 72 h. ** <span class="html-italic">p</span>-value &lt; 0.005; *** <span class="html-italic">p</span>-value &lt; 0.001.</p>
Full article ">Figure 9
<p>Effect of <span class="html-italic">Ruta graveolens</span> on tube formation by patient-derived GBM CSCs. (<b>A</b>) Representative images of VM formation by GBM2 GSCs in control (ctrl) and in treated samples at the specified concentrations. Images were obtained by analyzing cells under the Inverted Microscope Axiovert 25 at 5× magnification, scale bars: 50 µm. (<b>B</b>) Quantification of branching points was performed as described in <a href="#ijms-25-11789-f002" class="html-fig">Figure 2</a> legend. (<b>C</b>) Cell rate viability tested by MTT assays at 24 h. * <span class="html-italic">p</span>-value &lt; 0.05.</p>
Full article ">
17 pages, 1577 KiB  
Article
Correlation Analysis Among the Chemical Composition and Cytotoxic and Antioxidative Activities of a Tessaria absinthioides Decoction for Endorsing Its Potential Application in Oncology
by Lourdes Inés Pascual, Lorena Luna, Roxana Elizabeth González, Javier Esteban Ortiz, Luciano Gomez-Gomez, Osvaldo Juan Donadel, María Belén Hapon, Gabriela Egly Feresin and Carlos Gamarra-Luques
Plants 2024, 13(21), 3062; https://doi.org/10.3390/plants13213062 - 31 Oct 2024
Viewed by 604
Abstract
Historically, botanical preparations have been used to improve human health. Their active ingredients are influenced by multiple factors such as intraspecies variations, environmental conditions, collection time and methods, and the part of the plant used. To ensure the efficiency and safety of these [...] Read more.
Historically, botanical preparations have been used to improve human health. Their active ingredients are influenced by multiple factors such as intraspecies variations, environmental conditions, collection time and methods, and the part of the plant used. To ensure the efficiency and safety of these herbal drugs, qualitative and quantitative analyses are required. A Tessaria absinthioides decoction (DETa) was reported as having hypocholesterolemic, anti-inflammatory, cytotoxic, antitumor, and antioxidative properties. This work aimed to analyze DETa by correlating its chemical composition with cytotoxic and antioxidative properties, with the aim of promoting research on it as an anticancer agent. DETa collections (2017, 2018, 2019, and 2022) were analyzed by UHPLC-DAD, UHPLC-DAD-FLD, and UPLC-MS/MS; cytotoxicity was assessed on the MCF-7 breast cancer cell line; antioxidative capacity was evaluated by the DPPH and FRAP methods; and correlation analysis was used to determine biological and chemical markers. The results provide evidence that biological activities were consistent across the collections. Among the quantified compounds, apigenin, naringin, gallocatechin gallate, ginnalin A, myricetin, epicatechin, OH-tyrosol, quercetin, and chlorogenic, tessaric, p-coumaric, vanillic, caffeic, caftaric, ellagic, and rosmarinic acids correlated as bioactive and chemical markers. Moreover, tessaric acid could be established as a species marker. Altogether, these findings add relevant information to DETa properties, encouraging further exploration of its potential application as an anticancer botanical. Full article
Show Figures

Figure 1

Figure 1
<p>Total phenolic content (blue bars), FRAP (orange bars), and EC50 of the DPPH assay (purple line) of <span class="html-italic">T. absinthioides</span> decoction (DETa) samples. Results are expressed as the mean ± SD (standard deviation). Different letters indicate significant difference among samples, as determined by the Tukey test (<span class="html-italic">p</span> &lt; 0.05).</p>
Full article ">Figure 2
<p>Cytotoxicity of DETa collections discriminated by year. Dm: median-effect dose. IAC: interannual cytotoxicity (calculated as the mean of DETa 2017, 2018, 2019, and 2022 cytotoxicity). Assays were performed in triplicate, and the means ± SD were compared by ANOVA, followed by the Tukey’s multiple comparisons test. a: indicates that no significant differences were found between the groups (<span class="html-italic">p</span> ≤ 0.05).</p>
Full article ">Figure 3
<p>CPA analysis performed on cytotoxicity. (<b>a</b>) Projection of the collections on the factor plane. (<b>b</b>) Projection of cases on the factor plane.</p>
Full article ">Figure 4
<p>CPA analysis performed on antioxidative properties. (<b>a</b>) Projection of the collections on the factor plane. (<b>b</b>) Projection of cases on the factor plane. The blue point that indicates “DPPH + 5” refers to DPPH, epicatechin, OH-tyrosol, gallocatechin gallate, quercetin, and ginnalin A.</p>
Full article ">
Back to TopTop