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2 pages, 199 KiB  
Abstract
Microplastics Contamination of Large Pelagic Fish in the Open Atlantic Ocean
by Rúben Pereira, Sabrina M. Rodrigues, Diogo Silva, Vânia Freitas, C. Marisa R. Almeida, António Camilo, Susana Barbosa, Eduardo Silva and Sandra Ramos
Biol. Life Sci. Forum 2022, 13(1), 11; https://doi.org/10.3390/blsf2022013011 - 2 Jun 2022
Viewed by 1092
Abstract
Fish are one of the most important components of the ocean, playing relevant ecological roles and providing several ecosystem services. Large migratory fish, such as tunas, mackerels and amberjacks, can function as valuable indicators of ocean health, since they are top predators and [...] Read more.
Fish are one of the most important components of the ocean, playing relevant ecological roles and providing several ecosystem services. Large migratory fish, such as tunas, mackerels and amberjacks, can function as valuable indicators of ocean health, since they are top predators and are exposed to several anthropogenic pressures, including pollution from different sources. Microplastics (MPs), small plastic particles (<5 mm), are ubiquitous throughout the world, occurring even in habitats with little anthropogenic pressure such as open sea waters. Taking advantage of the unique fish collection gathered by the NRP Sagres Crew during the 2020 Circumnavigation Expedition, biological samples of fish gastrointestinal tract and gills were collected and properly stored on board for further laboratorial analyses to assess MP contamination, using optimized protocols. MPs were characterized in terms of shape and color, and polymers were identified using FTIR. Seven fish were collected across the middle of the Atlantic Ocean, between the continents of Africa and South America, and along the South American coast. Three Acanthocybium solandri, two Seriola lalandi, one Thunnus abacares and one Coryphaena spp. were collected, with the total length ranging from 54 cm to 127 cm, and total weight from 1 kg to 11 kg, including adults and one juvenile (S. lalandi). A total of 124 MPs were observed in the gastrointestinal tract and gills, including 72% of fibers and 28% particles. Rayon was the most abundant polymer (25%), and a large majority MPs were blue (85%). Fibers were mainly Rayon (34%) and blue, while particles were mostly composed of polypropylene (71%). MPs were found in all fish, with an average of 18 ± 11 MPs per fish. In all sampled fish, both organs presented MPs with a mean number of 9 ± 5 MPs in the gills and 9 ± 6 MPs in the gut. These results demonstrate the ubiquitous occurrence of MPs throughout the world, even in remote areas such as the open Atlantic Ocean, and in top predators which are more prone to bioaccumulate pollutants. This study reinforces the need for further research regarding plastic pollution and MP contamination in species from higher trophic levels. Full article
(This article belongs to the Proceedings of The IX Iberian Congress of Ichthyology)
28 pages, 3083 KiB  
Review
Secondary Metabolites and Biological Activity of Invasive Macroalgae of Southern Europe
by Patrícia Máximo, Luísa M. Ferreira, Paula Branco, Pedro Lima and Ana Lourenço
Mar. Drugs 2018, 16(8), 265; https://doi.org/10.3390/md16080265 - 2 Aug 2018
Cited by 52 | Viewed by 6597
Abstract
In this review a brief description of the invasive phenomena associated with algae and its consequences on the ecosystem are presented. Three examples of invasive algae of Southern Europe, belonging to Rodophyta, Chlorophyta, and Phaeophyta, were selected, and a brief [...] Read more.
In this review a brief description of the invasive phenomena associated with algae and its consequences on the ecosystem are presented. Three examples of invasive algae of Southern Europe, belonging to Rodophyta, Chlorophyta, and Phaeophyta, were selected, and a brief description of each genus is presented. A full description of their secondary metabolites and biological activity is given and a summary of the biological activity of extracts is also included. In Asparagopsis we encounter mainly halogenated compounds. From Caulerpa, several terpenoids and alkaloids were isolated, while in Sargassum, meroterpenoids prevail. Full article
(This article belongs to the Special Issue Progress on Marine Natural Products as Lead Compounds)
Show Figures

Figure 1

Figure 1
<p>Hydroxylated sterols from <span class="html-italic">A. armata</span>.</p>
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<p>Brominated cyclopentenones from <span class="html-italic">A. taxiformis</span>.</p>
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<p>Oxygenated sterols from <span class="html-italic">C. racemosa</span>.</p>
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<p>Metabolites from <span class="html-italic">C. racemosa.</span></p>
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<p>Metabolites from <span class="html-italic">C. racemosa</span>.</p>
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<p>Metabolite from <span class="html-italic">C. prolifera</span>.</p>
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<p>Sesquiterpenes from <span class="html-italic">Caulerpa</span> sp.</p>
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<p>Diterpenes from <span class="html-italic">Caulerpa</span> sp.</p>
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<p>Sterols from <span class="html-italic">Sargassum</span> sp.</p>
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<p>Quinones and hydroquinones from <span class="html-italic">Sargassum</span> sp.</p>
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<p>Quinones and hydroquinones from <span class="html-italic">Sargassum</span> sp.</p>
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<p>Chromenes from <span class="html-italic">Sargassum</span> sp.</p>
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<p>Chromenes from <span class="html-italic">Sargassum</span> sp.</p>
Full article ">Figure 11 Cont.
<p>Chromenes from <span class="html-italic">Sargassum</span> sp.</p>
Full article ">Figure 11 Cont.
<p>Chromenes from <span class="html-italic">Sargassum</span> sp.</p>
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<p>Other structures from <span class="html-italic">Sargassum</span> sp.</p>
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<p>Other structures from <span class="html-italic">Sargassum</span> sp.</p>
Full article ">Figure 12 Cont.
<p>Other structures from <span class="html-italic">Sargassum</span> sp.</p>
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32454 KiB  
Review
The Role of Spongia sp. in the Discovery of Marine Lead Compounds
by Patrícia Máximo, Luísa M. Ferreira, Paula Branco, Pedro Lima and Ana Lourenço
Mar. Drugs 2016, 14(8), 139; https://doi.org/10.3390/md14080139 - 23 Jul 2016
Cited by 23 | Viewed by 10343
Abstract
A comprehensive review on the chemistry of Spongia sp. is here presented, together with the biological activity of the isolated compounds. The compounds are grouped in sesquiterpene quinones, diterpenes, C21 and other linear furanoterpenes, sesterterpenes, sterols (including secosterols), macrolides and miscellaneous compounds. Among [...] Read more.
A comprehensive review on the chemistry of Spongia sp. is here presented, together with the biological activity of the isolated compounds. The compounds are grouped in sesquiterpene quinones, diterpenes, C21 and other linear furanoterpenes, sesterterpenes, sterols (including secosterols), macrolides and miscellaneous compounds. Among other reports we include studies on the intraspecific diversity of a Mediterranean species, compounds isolated from associated sponge and nudibranch and compounds isolated from S. zimocca and the red seaweed Laurentia microcladia. Under biological activity a table of the reported biological activities of the various compounds and the biological screening of extracts are described. The present review covers the literature from 1971 to 2015. Full article
(This article belongs to the Collection Bioactive Compounds from Marine Invertebrates)
Show Figures

Graphical abstract

Graphical abstract
Full article ">Figure 1
<p>Structures of 5-<span class="html-italic">epi</span>-isospongiaquinone <b>1</b> and 5-<span class="html-italic">epi</span>-homoisospongiaquinone <b>2</b>.</p>
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<p>Structures of compound <b>3</b>, dehydrocyclospongiaquinone-1 <b>4</b> and spongiaquinone <b>5</b>.</p>
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<p>Structures of cyclosmenospongine <b>6</b>, smenospongiarine <b>7</b>, ilimaquinone <b>8</b> and smenospongine <b>9</b>.</p>
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<p>Structures of 17-<span class="html-italic">O</span>-isoprenyldictyoceratin-C <b>10</b> and dictyoceratin-C <b>11</b>.</p>
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<p>Structures of metachromins J <b>12</b> and K <b>13</b>, L–T, <b>14</b>–<b>22</b>, A <b>23</b>, and C–E <b>24</b>–<b>26</b>.</p>
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<p>Structures of nakijiquinone E <b>27</b> and F <b>28</b>, dictyoceratins A–C, <b>29</b>, <b>30</b>, isospongiaquinone <b>31</b>, 6′-hydroxy-4′-methoxyavarone <b>32</b>, neoavarol <b>33</b>, nakijiquinones A–D <b>34</b>–<b>37</b>, and an <span class="html-italic">endo</span> olefin isomer at C-3 of smenospongine <b>38</b>.</p>
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<p>Structure of smenoquinone <b>39</b>.</p>
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<p>Structure of isoagatholactone <b>40</b>.</p>
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<p>Structures of spongia-13(16),14-dien-19-oic acid <b>41</b>, spongia-13(16),14-dien-19-al <b>42</b> and spongia-13(16),14-diene <b>43</b>.</p>
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<p>Structures of 15α,16α-diacetoxyspongian <b>44</b>, <span class="html-italic">ent</span>-isocopal-12-en-15,16-dial <b>45</b>, 14-iso-<span class="html-italic">ent</span>-isocopal-12-en-15,16-dial <b>46</b> and 15-acetoxy-<span class="html-italic">ent</span>-isocopal-12-en-16-al <b>47</b>.</p>
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<p>Structures of 11β-hydroxyspongi-12-en-16-one <b>48</b>, 11β-acetoxyspongi-12-en-16-one <b>49</b>, aplysillin <b>50</b>, 7β,11β-dihydroxyspongi-12-en-16-one <b>51</b>, and 7β,11α-dihydroxyspongi-12-en-16-one <b>52</b>.</p>
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<p>Structures of 2α,19-dihydroxyspongia-13(16),14-dien-3-one (isospongiadiol) <b>53</b>, <b>54</b> (epispongiadiol) and <b>55</b> (spongiadiol).</p>
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<p>Structures of spongialactone A <b>56</b>, 19-acetoxy-3α-hydroxyspongia-13(16),14-dien-2-one <b>57</b>, 3α-17,19-trihydroxyspongia-13(16),14-dien-2-one <b>58</b>, and 3β,17,19-trihydroxyspongia-13(16),14-dien-2-one <b>59</b>.</p>
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<p>Structures of 2β,3β,17,19-tetrahydroxyspongia-13(16),14-diene <b>60</b>, 2-oxa-17,19-dihydroxyspongia 13(16),14-dien-3-one <b>61</b>, 17-hydroxy-4-<span class="html-italic">epi</span>-spongialactone A <b>62</b>, and 19-nor-3-hydroxyspongia-3,13(16),14-trien-2-one <b>63</b>.</p>
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<p>Structures of 3β,17-dihydroxyspongia-13(16),14-dien-2-one <b>64</b>, 3α,17-dihydroxyspongia-13(16),14-dien-2-one <b>65</b>, 2α,17-dihydroxyspongia-13(16),14-dien-3-one <b>66</b>, 2β,17-dihydroxyspongia-13(16),14-dien-3-one <b>67</b>, and 3α-hydroxyspongia-13(16),14-dien-3-one <b>68</b>.</p>
Full article ">Figure 16
<p>Structures of 12-deacetyl-aplysillin <b>69</b>, 15,16-diacetoxy-11-oxo-<span class="html-italic">ent</span>-isocopal-12ene <b>70</b>, 15-hydroxy-<span class="html-italic">ent</span>-isocopal-12-en-16-al <b>71</b>, 15,17-diacetoxy-<span class="html-italic">ent</span>-isocopal-12-en-16-al <b>72</b>, and compound <b>73</b>.</p>
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<p>Strutures of furanoterpenes <b>74</b> and <b>75</b>.</p>
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<p>Strutctures of 16β-methoxy-15-oxospongi-13-en-19-oic-acid <b>76</b>, 16α-methoxy-15-oxospongi-13-en-19-oic-acid <b>77</b>, 15-oxospongi-13-en-19-oic acid <b>78</b>, 15α-methoxy-16-oxospongi-13-en-19-oic-acid <b>79</b>, 16-oxospongi-13-en-19-oic acid <b>80</b>, and 13β,14α-dihydroxy-15α,16ξ-dimethoxyspongian-19-oic-acid <b>81</b>.</p>
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<p>Structures of spongiabutenolides A–D, <b>82</b>–<b>85</b>.</p>
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<p>Structures of zimoclactone A <b>86</b>, zimoclactone B <b>87</b>, and zimoclactone C <b>88</b>.</p>
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<p>Structures of 19-acetoxyspongia-13(16),14-dien-3-one <b>89</b>, 3β,19-diacetoxyspongia-13(16),14-diene <b>90</b>, 3β-acetoxyspongia-13(16),14-diene <b>91</b>, 3α-acetoxyspongia-13(16),14-diene <b>92</b>, 2(<span class="html-italic">R</span>),3(<span class="html-italic">S</span>),4(<span class="html-italic">S</span>)-3,18-methylene-2α-acetoxyspongia-13(16),14-diene <b>93</b>, and 19-acetoxyspongia-13(16),14-diene <b>94</b>.</p>
Full article ">Figure 22
<p>Structures of 20-acetoxy-19-hydroxyspongia-13(16),14-diene <b>95</b>, 19-acetoxy-20-hydroxyspongia-13(16),14-diene <b>96</b>, 19,20-diacetoxyspongia-13(16),14-diene <b>97</b>, and 19,20-dihydroxyspongia-13(16),14-diene <b>98</b>.</p>
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<p>Structures of 19-norspongia-13(16),14-dien-3-one <b>99</b>, and compounds <b>100</b>–<b>102</b>.</p>
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<p>Structures of 18-nor-3,17-dihydroxyspongia-3,13(16),14-trien-2-one <b>103</b>, 18-nor-3,5,17-trihydroxyspongia-3,13(16),14-trien-2-one <b>104</b>, and spongiapyridine <b>105</b>.</p>
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<p>Proposed biosynthesis route for compounds <b>103</b>, <b>104</b> and <b>105</b>.</p>
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<p>Structure of haumanamide <b>106</b>.</p>
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<p>Structures of spongidines A–D <b>107</b>–<b>110</b>.</p>
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<p>Structures of spongolactams A–C, <b>111</b>–<b>113</b>.</p>
Full article ">Figure 29
<p>Structures of 3α,19-diacetoxyspongia-13(16),14-dien-2-one <b>114</b>, 3β,19-diacetoxyspongia-13(16),14-dien-2-one <b>115</b>, and 3β,17,19-triacetoxyspongia-13(16),14-dien-2-one <b>116</b>.</p>
Full article ">Figure 30
<p>Structures of nitenin <b>117</b>, dihydronitenin <b>118</b>, furospongin-1 <b>119</b>, anhydrofurospongin-1 <b>120</b>, furospongin-2 <b>121</b>, isofurospongin-2 <b>122</b>, dihydrofurospongin-2 <b>123</b>, tetrahydrofurospongin-2 <b>124</b>, furospongin-3 <b>125</b>, and furospongin-4 <b>126</b>.</p>
Full article ">Figure 31
<p>Structures of furospongin-1 <b>119</b> related compounds with γ-hydroxy-α,β-butenolide and β,γ-epoxybutenolide rings, <b>127</b>–<b>134</b>.</p>
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<p>Structure of tetradehydrofurospongin-1 <b>135</b>.</p>
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<p>Structure of tetradehydrofurospongin-1 <b>136</b>.</p>
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<p>Structures of furospongenol <b>137</b> and furospongenone <b>138</b>.</p>
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<p>Structures of idiadione <b>139</b> and furospinulosin-1 <b>140</b>.</p>
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<p>Structure of C-21 furanoterpene <b>141</b>.</p>
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<p>Structure of (−)-isotetradehydrofurospongin-1 <b>142</b>.</p>
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<p>Structure of kurospongin <b>143</b>.</p>
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<p>Structures of furospongin-2 <b>121</b> isomers <b>144</b>–<b>146</b>.</p>
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<p>Structure of tetronic acid <b>147</b>.</p>
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<p>Structures of cometins A–C <b>148</b>–<b>150</b>.</p>
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<p>Structures of ambliofuran <b>151</b>, (<span class="html-italic">S</span>)-12-hydroxyambliofuran <b>152</b>, (<span class="html-italic">S</span>)-12-acetoxyambliofuran <b>153</b>, and compound <b>154</b>.</p>
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<p>Structure of isonitenin <b>155</b>.</p>
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<p>Structures of furospongin-5 <b>156</b>, cyclofurospongin-2 <b>157</b>, and demethylfurospongin-4 <b>158</b>.</p>
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<p>Structures of 7,8-epoxy-furospongin-1 <b>159</b>, isofurospongin-4 <b>160,</b> and compound <b>161</b>.</p>
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<p>Structure of compound <b>162.</b></p>
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<p>Structures of deoxoscalarin <b>163</b>, scalarin <b>164</b>, 12-<span class="html-italic">epi</span>-deoxoscalarin <b>165</b>, and 12-<span class="html-italic">epi</span>-scalarin <b>166</b>.</p>
Full article ">Figure 48
<p>Structures of 12-<span class="html-italic">epi</span>-scalaradial <b>167</b> and 12,18-di<span class="html-italic">-epi</span>-scalaradial <b>168</b>.</p>
Full article ">Figure 49
<p>Structures of 12-deacetyl-12,18-di-<span class="html-italic">epi</span>-scalaradial <b>169</b>, scalarafuran <b>170</b>, scalarolide <b>171</b>, and <b>172</b>.</p>
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<p>Structure of scalarolbutenolide <b>173</b>.</p>
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<p>Structures of 16-deacetoxy-12-<span class="html-italic">epi</span>-scalarafuran acetate <b>174</b>, deoxoscalarin acetate <b>175</b>, and (−)-12-<span class="html-italic">epi</span>-deoxoscalarin <b>176</b>.</p>
Full article ">Figure 52
<p>Structures of isoscalarafuran A <b>177</b>, isoscalarafuran B <b>178</b>, and hyrtiosal <b>179</b>.</p>
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<p>Structures of spongianolides A–F <b>180</b>–<b>185</b>.</p>
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<p>Structures of 12α-acetoxy-19β-hydroxyscalara-15,17-dien-20,19-olide <b>186</b>, 12α,16β-diacetoxyscalarolbutenolide <b>187</b>, and 12α-acetoxy-16β-hydroxyscalarolbutenolide <b>188</b>.</p>
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<p>Structures of 12,16-di-<span class="html-italic">epi</span>-12-<span class="html-italic">O</span>-deacetyl-16-<span class="html-italic">O</span>-acetylfuroscalarol <b>189</b> and 16-<span class="html-italic">epi</span>-scalarolbutenolide <b>190</b>.</p>
Full article ">Figure 56
<p>Structures of 12-<span class="html-italic">O</span>-deacetylscalafuran <b>191</b>, 12-<span class="html-italic">O</span>-deacetyl-12-<span class="html-italic">epi</span>-scalarin <b>192</b>, 12-<span class="html-italic">O</span>-acetyl-16-<span class="html-italic">O</span>-methylhyrtiolide <b>193</b>, and 12-<span class="html-italic">O</span>-deacetyl-12-<span class="html-italic">epi</span>-19-deoxyscalarin <b>194</b>.</p>
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<p>Structures of deacetoxy scalarin <b>195</b>, and compounds <b>196</b> and <b>197</b>.</p>
Full article ">Figure 58
<p>Structures of 12,24-diacetoxy-deoxoscalarin <b>198</b>, 12-<span class="html-italic">O</span>-deacetoxyl-24-hydroxyl-deoxoscalarin <b>199</b>, and 12-<span class="html-italic">O</span>-deacetoxyl-19-<span class="html-italic">O</span>-methyldeoxoscalarin <b>200</b>, and compound <b>201</b>.</p>
Full article ">Figure 59
<p>Structures of 12-<span class="html-italic">O</span>-deacetyl-12-<span class="html-italic">epi</span>-19-deoxy-21-hydroxyscalarin <b>202</b>, 12-<span class="html-italic">O</span>-deacetyl-12-<span class="html-italic">epi</span>-19-deoxy-22-hydroxyscalarin <b>203</b>, and 12-<span class="html-italic">O</span>-deacetyl-12-<span class="html-italic">epi</span>-19-<span class="html-italic">O</span>-methylscalarin <b>204</b>.</p>
Full article ">Figure 60
<p>Structures of 21-hydroxy petrosaspongiolide K <b>205</b>, 21-hydroxy petrosaspongiolide P <b>206</b>, petrosapongiolides D <b>207</b>, and G <b>208</b>.</p>
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<p>Strutures of irregularasulfate <b>209</b>, hipposulfate C <b>210</b>, halisulfate-7 <b>211</b>, and igernellin <b>212</b>.</p>
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<p>Structures of petrosaspongiolides A <b>213</b>, B <b>214</b>, and I <b>215</b>.</p>
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<p>Structure of scalaradial <b>216</b>.</p>
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<p>Structures of 3β,5α-dihydroxy-6β-methoxycholest-7-enes <b>217</b>, <b>218</b>, and <b>219</b>.</p>
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<p>Structures of 3β,5α,6β-trihydroxycholest-7-enes <b>220</b>–<b>234</b>.</p>
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<p>Structures of 5α-cholest-7-ene-3β,5,6β,9-tetraol <b>235</b>, (22<span class="html-italic">E</span>)-5α-cholest-7,22-diene-3β,5,6β,9-tetraol <b>236</b>, (22<span class="html-italic">E</span>,24<span class="html-italic">S</span>)-24-methyl-5α-cholest-7,22-diene-3β,5,6β,9-tetraol <b>237</b>, 24-methylene-5α-cholest-7-ene-3β,5,6β,9-tetraol <b>238</b>, (24<span class="html-italic">S</span>)-24-ethyl-5α-cholest-7-ene-3β,5,6β,9-tetraol <b>239</b>, and (24<span class="html-italic">R</span>)-24-ethyl-5α-cholest-7-ene-3β,5,6β,9-tetraol <b>240</b>.</p>
Full article ">Figure 67
<p>Structures of 5α,6α-epoxycholest-8(14)-ene-3β,7α-diol 3,7-diacetate <b>241</b>, (22<span class="html-italic">E</span>,24ξ)-5α,6α-epoxy-24-methylcholesta-8(14),22-diene-3β,7α-diol 3,7-diacetate <b>242</b>, 5α,6α-epoxy-24-methylcholesta-8(14),24(28)-diene-3β,7α-diol 3,7-diacetate <b>243</b>, 5α,6α-epoxy-cholest-8-ene-3β,7α-diol 3,7-diacetate <b>244</b>, (22<span class="html-italic">E</span>,24ξ)-5α,6α-epoxy-24-methylcholesta-8,22-diene-3β,7α-diol 3,7-diacetate <b>245</b>, and 5α,6α-epoxy-24-methylcholesta-8,24(28)-diene-3β,7α-diol 3,7-diacetate <b>246</b>.</p>
Full article ">Figure 68
<p>Structures of agosterol A <b>247</b>, B <b>248</b>, C <b>249</b>, A<sub>4</sub> <b>250</b>, D<sub>2</sub> <b>251</b>, A<sub>5</sub> <b>252</b> and C<sub>6</sub> <b>253</b>.</p>
Full article ">Figure 69
<p>Structure of 9,11-secosterol, 3β,6α-dihydroxy-9-oxo-9,11-seco-5α-cholest-7-en-11-al <b>254</b>.</p>
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<p>Structures of 9,11-seco-3β,6α,11-trihydroxy-5α-cholest-7-en-9-one <b>255</b>, and 9,11-seco-3β,6α,11-trihydroxy-24-methylene-5α-cholest-7-en-9-one <b>256</b>.</p>
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<p>Structure of 3β-acetoxy-5,6β-dihydroxy-9-oxo-9,11-seco-5α-cholest-7-en-11-al <b>257</b>.</p>
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<p>Structure of 3β-hydroxy-5α,6α-epoxy-9-oxo-9,11-seco-5α-cholest-7-en-11-al <b>258</b>.</p>
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<p>Structures of 3-<span class="html-italic">O</span>-deacetylluffasterol B <b>259</b> and 3-<span class="html-italic">O</span>-deacetyl-22,23-dihydro-24,28-dehydroluffasterol B <b>260</b>.</p>
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<p>Structures of fijianolides A <b>261</b> and B <b>262</b>.</p>
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<p>Structures of spongistatins 1–3 <b>263</b>–<b>265</b> and dictyostatin 1 <b>266</b>.</p>
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<p>Structure of spongidepsin <b>267</b>.</p>
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<p>Structure of (2<span class="html-italic">R</span>,4<span class="html-italic">R</span>,7<span class="html-italic">R</span>,9<span class="html-italic">R</span>,16<span class="html-italic">S</span>)-spongidepsin <b>268</b>.</p>
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<p>Structure of p-quinol <b>269</b>.</p>
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<p>Structure of pokepola ester <b>270</b>.</p>
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<p>Structure of spongilipid <b>271</b>.</p>
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<p>Structure of the alkaloids <b>272</b>–<b>274</b>.</p>
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<p>Structure of spongiacysteine <b>275</b>.</p>
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<p>Structures of ceramide <b>276</b>, compound <b>277</b> and the guanidine acetic salt <b>278</b>.</p>
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<p>Structures of the ceramides 2-hydroxy-<span class="html-italic">N</span>-(1,3,4-trihydroxy-17-methyloctadecan-2-yl)-18-methylarachidamide <b>279</b>, 2-hydroxy-<span class="html-italic">N</span>-(1,3,4-trihydroxy-17-methyloctadecan-2-yl)-19-methyl-henicosanamide <b>280</b>, and 2-hydroxy-<span class="html-italic">N</span>-(1,3,4-trihydroxy-17-methyloctadecan-2-yl)-20-methyl-behenamide <b>281</b>.</p>
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<p>Structures of <span class="html-italic">N</span>-palmitoyl-heptacosane-1,3,5-triol <b>282</b>.</p>
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<p>Structures of heterofibrins A1 <b>283</b>, A2 <b>284,</b> A3 <b>285</b>, B1 <b>286</b>, B2 <b>287</b> and B3 <b>288</b>.</p>
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<p>Structures of officinoic acid A <b>289</b> and officinoic acid B <b>290</b>.</p>
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<p>Structure of compound <b>291</b>.</p>
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<p>Structure of ergosteryl myristate <b>292</b>.</p>
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<p>Structures of 12-deacetylscalaradial <b>293</b>, 12-deacetyl-12-<span class="html-italic">epi</span>-scalaradial <b>294</b>, and 12-deacetyl-18-<span class="html-italic">epi</span>-12-oxoscalaradial <b>295</b>.</p>
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<p>Structures of dendrolasin <b>296</b> and latrunculin A <b>297</b>.</p>
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<p>Structure of mycothiazole <b>298</b>.</p>
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<p>Structures of rogiolol acetate <b>299</b>, rogiolenyne B <b>300</b>, rogiolenyne C <b>301</b>, isopimarane <b>302</b>, chamigrene 4<span class="html-italic">E</span> <b>303</b>, chamigrene 4<span class="html-italic">Z</span> <b>304</b>, bromosphaerol <b>305</b>, and sphaerococcenol A <b>306</b>.</p>
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4321 KiB  
Article
MERIS Phytoplankton Time Series Products from the SW Iberian Peninsula (Sagres) Using Seasonal-Trend Decomposition Based on Loess
by Sónia Cristina, Clara Cordeiro, Samantha Lavender, Priscila Costa Goela, John Icely and Alice Newton
Remote Sens. 2016, 8(6), 449; https://doi.org/10.3390/rs8060449 - 26 May 2016
Cited by 33 | Viewed by 9941
Abstract
The European Space Agency has acquired 10 years of data on the temporal and spatial distribution of phytoplankton biomass from the MEdium Resolution Imaging Spectrometer (MERIS) sensor for ocean color. The phytoplankton biomass was estimated with the MERIS product Algal Pigment Index 1 [...] Read more.
The European Space Agency has acquired 10 years of data on the temporal and spatial distribution of phytoplankton biomass from the MEdium Resolution Imaging Spectrometer (MERIS) sensor for ocean color. The phytoplankton biomass was estimated with the MERIS product Algal Pigment Index 1 (API 1). Seasonal-Trend decomposition of time series based on Loess (STL) identified the temporal variability of the dynamical features in the MERIS products for water leaving reflectance (ρw(λ)) and API 1. The advantages of STL is that it can identify seasonal components changing over time, it is responsive to nonlinear trends, and it is robust in the presence of outliers. One of the novelties in this study is the development and the implementation of an automatic procedure, stl.fit(), that searches the best data modeling by varying the values of the smoothing parameters, and by selecting the model with the lowest error measure. This procedure was applied to 10 years of monthly time series from Sagres in the Southwestern Iberian Peninsula at three Stations, 2, 10 and 18 km from the shore. Decomposing the MERIS products into seasonal, trend and irregular components with stl.fit(), the ρw(λ) indicated dominance of the seasonal and irregular components while API 1 was mainly dominated by the seasonal component, with an increasing effect from inshore to offshore. A comparison of the seasonal components between the ρw(λ) and the API 1 product, showed that the variations decrease along this time period due to the changes in phytoplankton functional types. Furthermore, inter-annual seasonal variation for API 1 showed the influence of upwelling events and in which month of the year these occur at each of the three Sagres stations. The stl.fit() is a good tool for any remote sensing study of time series, particularly those addressing inter-annual variations. This procedure will be made available in R software. Full article
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Graphical abstract

Graphical abstract
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<p>Geographical location of sampling Stations (A, B and C) off Sagres in the Southwestern part of the Iberian Peninsula.</p>
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<p>Schematic view of stl.fit().</p>
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<p>Time series plot of the Algal Pigment Index 1 (API 1) and the fitted models, at Station C.</p>
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<p>Decomposition plot of API 1 for Station C using: (<b>a</b>) stl() (grey); and (<b>b</b>) stl.fit() (blue).</p>
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<p>Comparison of the interquartile range (IQR) for the time series in <a href="#remotesensing-08-00449-f004" class="html-fig">Figure 4</a>a,b.</p>
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<p>Decomposition plots of MERIS water leaving reflectance (<span class="html-italic">ρ</span><sub>w</sub>) at: (<b>a</b>) 443; (<b>b</b>) 490; (<b>c</b>) 510; and (<b>d</b>) 560 nm, at the three Stations by stl.fit().</p>
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<p>Decomposition plots of MERIS water constituent API 1 at the three Stations by stl.fit().</p>
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<p>Inter-annual variability of the seasonal component of the MERIS water constituent Algal Pigment Index 1 (API 1) at: (<b>a</b>) Station A; (<b>b</b>) Station B; and (<b>c</b>) Station C. Each line represents a year from 2002 to 2012.</p>
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