Search Results (142)

The spatial resolution (250–1000 m) of the FY-3D MERSI is too coarse for agricultural monitoring at the farmland scale (20–30 m). To achieve the winter wheat yield (WWY) at the farmland scale, based on FY-3D, a method framework is developed in this work. The enhanced deep convolutional spatiotemporal fusion network (EDCSTFN) was used to perform a spatiotemporal fusion on the 10 day interval FY-3D and Sentinel-2 vegetation indices (VIs), which were compared with the enhanced spatial and temporal adaptive reflectance fusion model (ESTARFM). In addition, a BP neural network was built to calculate the farmland-scale WWY based on the fused VIs, and the Aqua MODIS gross primary productivity product was used as ancillary data for WWY estimation. The results reveal that both the EDCSTFN and ESTARFM achieve satisfactory precision in the fusion of the Sentinel-2 and FY-3D VIs; however, when the period of spatiotemporal data fusion is relatively long, the EDCSTFN can achieve greater precision than ESTARFM. Finally, the WWY estimation results based on the fused VIs show remarkable correlations with the WWY data at the county scale and provide abundant spatial distribution details about the WWY, displaying great potential for accurate farmland-scale WWY estimations based on reconstructed fine-spatial-temporal-resolution FY-3D data. Full article

Hyperspectral infrared atmospheric sounding data, characterized by their high vertical resolution, play a crucial role in capturing three-dimensional atmospheric spatial information. The hyperspectral infrared atmospheric detectors HIRAS/HIRAS-II, mounted on the FY3D/EF satellite, have established an initial global coverage network for atmospheric sounding. The collaborative observation approach involving multiple satellites will improve both the coverage and responsiveness of data acquisition, thereby enhancing the overall quality and reliability of the data. In response to the increasing number of channels, the rapid growth of data volume, and the specific requirements of multi-satellite joint observation applications with infrared hyperspectral sounding data, this paper introduces an efficient storage and indexing method for infrared hyperspectral sounding data within a distributed architecture for the first time. The proposed approach, built on the Kubernetes cloud platform, utilizes the Google S2 discrete grid spatial indexing algorithm to establish a grid-based hierarchical model for unified metadata-embedded documents. Additionally, it optimizes the rowkey design using the BPDS model, thereby enabling the distributed storage of data in HBase. The experimental results demonstrate that the query efficiency of the Google S2 grid-based embedded document model is superior to that of the traditional flat model, achieving a query time that is only 35.6% of the latter for a dataset of 5 million records. Additionally, this method exhibits better data distribution characteristics within the global grid compared to the H3 algorithm. Leveraging the BPDS model, the HBase distributed storage system adeptly balances the node load and counteracts the detrimental effects caused by the accumulation of time-series remote sensing images. This architecture significantly enhances both storage and query efficiency, thus laying a robust foundation for forthcoming distributed computing. Full article

Fractional vegetation cover (FVC) is a crucial indicator for measuring the growth of surface vegetation. The changes and predictions of FVC significantly impact biodiversity conservation, ecosystem health and stability, and climate change response and prediction. Southwest China (SWC) is characterized by complex topography, diverse climate types, and rich vegetation types. This study first analyzed the spatiotemporal variation of FVC at various timescales in SWC from 2000 to 2020 using FVC values derived from pixel dichotomy model. Next, we constructed four machine learning models—light gradient boosting machine (LightGBM), support vector regression (SVR), k-nearest neighbor (KNN), and ridge regression (RR)—along with a weighted average heterogeneous ensemble model (WAHEM) to predict growing-season FVC in SWC from 2000 to 2023. Finally, the performance of the different ML models was comprehensively evaluated using tenfold cross-validation and multiple performance metrics. The results indicated that the overall FVC in SWC predominantly increased from 2000 to 2020. Over the 21 years, the FVC spatial distribution in SWC generally showed a high east and low west pattern, with extremely low FVC in the western plateau of Tibet and higher FVC in parts of eastern Sichuan, Chongqing, Guizhou, and Yunnan. The determination coefficient R² scores from tenfold cross-validation for the four ML models indicated that LightGBM had the strongest predictive ability whereas RR had the weakest. WAHEM and LightGBM models performed the best overall in the training, validation, and test sets, with RR performing the worst. The predicted spatial change trends were consistent with the MODIS-MOD13A3-FVC and FY3D-MERSI-FVC, although the predicted FVC values were slightly higher but closer to the MODIS-MOD13A3-FVC. The feature importance scores from the LightGBM model indicated that digital elevation model (DEM) had the most significant influence on FVC among the six input features. In contrast, soil surface water retention capacity (SSWRC) was the most influential climate factor. The results of this study provided valuable insights and references for monitoring and predicting the vegetation cover in regions with complex topography, diverse climate types, and rich vegetation. Additionally, they offered guidance for selecting remote sensing products for vegetation cover and optimizing different ML models. Full article

The leaf area index (LAI) is a key indicator of vegetation canopy structure and growth status, crucial for global ecological environment research. The Moderate Resolution Spectral Imager-II (MERSI-II) aboard Fengyun-3D (FY-3D) covers the globe twice daily, providing a reliable data source for large-scale and high-frequency LAI estimation. VI-based LAI estimation is effective, but species and growth status impacts on the sensitivity of the VI–LAI relationship are rarely considered, especially for MERSI-II. This study analyzed the VI–LAI relationship for eight biomes in China with contrasting leaf structures and canopy architectures. The LAI was estimated by adaptively combining multiple VIs and validated using MODIS, GLASS, and ground measurements. Results show that (1) species and growth stages significantly affect VI–LAI sensitivity. For example, the EVI is optimal for broadleaf crops in winter, while the RDVI is best for evergreen needleleaf forests in summer. (2) Combining vegetation indices can significantly optimize sensitivity. The accuracy of multi-VI-based LAI retrieval is notably higher than using a single VI for the entire year. (3) MERSI-II shows good spatial–temporal consistency with MODIS and GLASS and is more sensitive to vegetation growth fluctuation. Direct validation with ground-truth data also demonstrates that the uncertainty of retrievals is acceptable (R² = 0.808, RMSE = 0.642). Full article

Mastitis (MAS), endometritis (MET), and ketosis (KET) are prevalent diseases in dairy cows that result in substantial economic losses for the dairy farming industry. This study gathered 26,014 records of the health and sickness of dairy cows and 99,102 data of reproduction from 13 Holstein dairy farms in Central China; the milk protein and milk fat content from 56,640 milk samples, as well as the pedigree data of 37,836 dairy cows were obtained. The logistic regression method was used to analyze the variations in the prevalence rates of MAS, MET, and KET among various parities; the mixed linear model was used to examine the effects of the three diseases on milk production, milk quality, and reproductive traits. DMU software (version 5.2) utilized the DMUAI module in conjunction with the single-trait and two-trait animal model, as well as best linear unbiased prediction (BLUP), to estimate the genetic parameters for the three diseases, milk production, milk quality, and reproductive traits in dairy cows. The primary findings of the investigation comprised the following: (1) The prevalence rates of MAS, MET, and KET in dairy farms were 20.04%, 10.68%, and 7.33%, respectively. (2) MAS and MET had a substantial impact (p < 0.01) on milk production, resulting in significant decreases of 112 kg and 372 kg in 305-d Milk Yield (305-d MY), 4 kg and 12 kg in 305-d Protein Yield (305-d PY), and 6 kg and 16 kg in 305-d Fat Yield (305-d FY). As a result of their excessive 305-d MY, some cows were diagnosed with KET due to glucose metabolism disorder. The 305-d MY of cows with KET was significantly higher than that of healthy cows (205 kg, p < 0.01). (3) All three diseases resulted in an increase in the Interval from Calving to First Service (CTFS, 0.60–1.50 d), Interval from First Service to Conception (FSTC, 0.20–16.20 d), Calving Interval (CI, 4.00–7.00 d), and Number of Services (NUMS, 0.07–0.35). (4) The heritabilities of cows with MAS, MET, and KET were found to be low, with values of 0.09, 0.01, and 0.02, respectively. The genetic correlation between these traits ranged from 0.14 to 0.44. This study offers valuable insights on the prevention and control of the three diseases, as well as feeding management and genetic breeding. Full article

This study investigates the impacts of the joint assimilation of ground-based microwave radiometer (MWR) and FY-3D microwave sounder (MWTS-2/MWHS-2) observations on the analyses and forecasts for precipitation forecast. Based on the weather research and forecasting data assimilation (WRFDA) system, four experiments are conducted in this study, concerning a heavy precipitation event in Beijing on 2 July 2021, and 10-day batch experiments were also conducted. The key study findings include the following: (1) Both ground-based microwave radiometer and MWTS-2/MWHS-2 data contribute to improvements in the initial fields of the model, leading to appropriate adjustments in the thermal structure of the model. (2) The forecast fields of the experiments assimilating ground-based microwave radiometer and MWTS-2/MWHS-2 data show temperature and humidity performances closer to the true fields compared with the control experiment. (3) Separate assimilation of two types of microwave radiometer data can improve precipitation forecasts, while joint assimilation provides the most accurate forecasts among all the experiments. In the single-case, compared with the control experiment, the individual and combined assimilation of MWR and MWTS-2/MWHS-2 improves the six-hour cumulative precipitation threat score (TS) at the 25 mm level by 57.1%, 28.9%, and 38.2%, respectively. The combined assimilation also improves the scores at the 50 mm level by 54.4%, whereas individual assimilations show a decrease in performance. In the batch experiments, the MWR_FY experiment’s TS of 24 h precipitation forecast improves 28.5% at 10 mm and 330% at 25 mm based on the CTRL. Full article

This study investigates the impacts of assimilating the Microwave Humidity Sounder II (MWHS-2) radiance data carried on the FY-3D and FY-3E satellites on the analyses and forecasts of Typhoon Muifa in 2022 under clear-sky conditions. Data assimilation experiments are conducted using the Weather Research and Forecasting (WRF) model coupled with the Three-Dimensional Variational (3D-Var) Data Assimilation method to compare the different behaviors of FY-3D and FY-3E radiances. Additionally, the data assimilation strategies are assessed in terms of the sequence of applying the conventional and MWHS-2 radiance data. The results show that assimilating MWHS-2 data is able to enhance the dynamic and thermal structures of the typhoon system. The experiment with FY-3E MWHS-2 assimilated demonstrated superior performance in terms of simulating the typhoon’s structure and providing a prediction of the typhoon’s intensity and track than the experiment with FY-3D MWHS-2 did. The two-step assimilation strategy that assimilates conventional observations before the radiance data has improved the track and intensity forecasts at certain times, particularly with the FY-3E MWHS-2 radiance. It appears that large-scale atmospheric conditions are more refined by initially assimilating the Global Telecommunication System (GTS) data, with subsequent satellite data assimilation further adjusting the model state. This strategy has also confirmed improvements in precipitation prediction as it enhances the dynamic and thermal structures of the typhoon system. Full article

Plant flowering time is affected by endogenous and exogenous factors, but its variation patterns among different populations of a species has not been fully established. In this study, 27 Arabidopsis thaliana accessions were used to investigate the relationship between autonomous pathway gene methylation, gene expression and flowering time variation. DNA methylation analysis, RT-qPCR and transgenic verification showed that variation in the flowering time among the Arabidopsis populations ranged from 19 to 55 days and was significantly correlated with methylation of the coding regions of six upstream genes in the autonomous pathway, FLOWERING LOCUS VE (FVE), FLOWERING LOCUS Y (FY), FLOWERING LOCUS D (FLD), PEPPER (PEP), HISTONE DEACETYLASE 5 (HAD5) and Pre-mRNA Processing Protein 39-1 (PRP39-1), as well as their relative expression levels. The expression of FVE and FVE(CS) was modified separately through degenerate codon substitution of cytosine and led to earlier flowering of transgenic plants by 8 days and 25 days, respectively. An accurate determination of methylated sites in FVE and FVE(CS) among those transgenic plants and the recipient Col-0 verified the close relationship between the number of methylation sites, expression and flowering time. Our findings suggest that the methylation variation of these six key upstream transcription factors was associated with the gene expression level of the autonomous pathway and flowering time in Arabidopsis. The FVE(CS) and FVE genes in transgenic plants tended to be hypermethylated, which could be a protective mechanism for plants. However, modification of gene sequences through degenerate codon substitution to reduce cytosine can avoid hypermethylated transferred genes in transgenic plants. It may be possible to partially regulate the flowering of plants by modified trans-epigenetic technology. Full article

Evaluating sea surface temperature (SST) products is essential before their application in marine environmental monitoring and related studies. SSTs from the in situ SST Quality Monitor (iQuam) system, Advanced Microwave Scanning Radiometer 2 (AMSR2) aboard the Global Change Observation Mission 1st-Water, and the Microwave Radiation Imager (MWRI) aboard the Chinese Fengyun-3D satellite are intercompared utilizing extended triple collocation (ETC) and direct comparison methods. Additionally, error characteristic variations with respect to time, latitude, SST, sea surface wind speed, columnar water vapor, and columnar cloud liquid water are analyzed comprehensively. In contrast to the prevailing focus on SST validation accuracy, the random errors and the capability to detect SST variations are also evaluated in this study. The result of ETC analysis indicates that iQuam SST from ships exhibits the highest random error, above 0.83 °C, whereas tropical mooring SST displays the lowest random error, below 0.28 °C. SST measurements from drifters, tropical moorings, Argo floats, and high-resolution drifters, which possess random errors of less than 0.35 °C, are recommended for validating remotely sensed SST. The ability of iQuam, AMSR2, and MWRI to detect SST variations diminishes significantly in ocean areas between 0°N and 20°N latitude and latitudes greater than 50°N and 50°S. AMSR2 and iQuam demonstrate similar random errors and capabilities for detecting SST variations, whereas MWRI shows a high random error and weak capability. In comparison to iQuam SST, AMSR2 exhibits a root-mean-square error (RMSE) of about 0.51 °C with a bias of −0.05 °C, while MWRI shows an RMSE of about 1.26 °C with a bias of −0.14 °C. Full article

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a positive-sense, single-stranded RNA genome-containing virus which has infected millions of people all over the world. The virus has been mutating rapidly enough, resulting in the emergence of new variants and sub-variants which have reportedly been spread from Wuhan city in China, the epicenter of the virus, to the rest of China and all over the world. The occurrence of mutations in the viral genome, especially in the viral spike protein region, has resulted in the evolution of multiple variants and sub-variants which gives the virus the benefit of host immune evasion and thus renders modern-day vaccines and therapeutics ineffective. Therefore, there is a continuous need to study the genetic characteristics and evolutionary dynamics of the SARS-CoV-2 variants. Hence, in this study, a total of 832 complete genomes of SARS-CoV-2 variants from the cities of Taiyuan and Wuhan in China was genetically characterized and their phylogenetic and evolutionary dynamics studied using phylogenetics, genetic similarity, and phylogenetic network analyses. This study shows that the four most prevalent lineages in Taiyuan and Wuhan are as follows: the Omicron lineages EG.5.1.1, followed by HK.3, FY.3, and XBB.1.16 (Pangolin classification), and clades 23F (EG.5.1), followed by 23H (HK.3), 22F (XBB), and 23D (XBB.1.9) (Nextclade classification), and lineage B followed by the Omicron FY.3, lineage A, and Omicron FL.2.3 (Pangolin classification), and the clades 19A, followed by 22F (XBB), 23F (EG.5.1), and 23H (HK.3) (Nextclade classification), respectively. Furthermore, our genetic similarity analysis show that the SARS-CoV-2 clade 19A-B.4 from Wuhan (name starting with 412981) has the least genetic similarity of about 95.5% in the spike region of the genome as compared to the query sequence of Omicron XBB.2.3.2 from Taiyuan (name starting with 18495234), followed by the Omicron FR.1.4 from Taiyuan (name starting with 18495199) with ~97.2% similarity and Omicron DY.3 (name starting with 17485740) with ~97.9% similarity. The rest of the variants showed ≥98% similarity with the query sequence of Omicron XBB.2.3.2 from Taiyuan (name starting with 18495234). In addition, our recombination analysis results show that the SARS-CoV-2 variants have three statistically significant recombinant events which could have possibly resulted in the emergence of Omicron XBB.1.16 (recombination event 3), FY.3 (recombination event 5), and FL.2.4 (recombination event 7), suggesting some very important information regarding viral evolution. Also, our phylogenetic tree and network analyses show that there are a total of 14 clusters and more than 10,000 mutations which may have probably resulted in the emergence of cluster-I, followed by 47 mutations resulting in the emergence of cluster-II and so on. The clustering of the viral variants of both cities reveals significant information regarding the phylodynamics of the virus among them. The results of our temporal phylogenetic analysis suggest that the variants of Taiyuan have likely emerged as independent variants separate from the variants of Wuhan. This study, to the best of our knowledge, is the first ever genetic comparative study between Taiyuan and Wuhan cities in China. This study will help us better understand the virus and cope with the emergence and spread of new variants at a local as well as an international level, and keep the public health authorities informed for them to make better decisions in designing new viral vaccines and therapeutics. It will also help the outbreak investigators to better examine any future outbreak. Full article

The Tibetan Plateau vortex (TPV), as an α-scale mesoscale weather system, often brings severe weather conditions like torrential rain and severe convective storms. Based on the detections from the Global Precipitation Measurement (GPM) Core Observatory’s Dual-frequency Precipitation Radar (DPR) and the FY-4A satellite’s Advanced Geostationary Radiation Imager (AGRI), combined with ERA5 reanalysis data, the precipitation characteristics of a TPV moving eastward during 8–13 July 2021 at different developmental stages are explored in this study. It was clear that the near-surface precipitation rate of the TPV during the initial stage at the eastern Tibetan Plateau (TP) was below 1 mm·h⁻¹, implying overall weak precipitation dominated by stratiform clouds. After moving out of the TP, the radar reflectivity factor (Ze), precipitation rate, and normalized intercept parameter (dBNw) significantly increased, while the proportion of convective clouds gradually rose. Following the TPV movement, the distribution range and vertical thickness of Ze, mass-weighted mean diameter (Dm), and dBNw tended to increase. The high-frequency region of Ze appeared at 15–20 dBZ, while Dm and dBNw occurred at around 1 mm and 33 mm⁻¹·m⁻³, respectively. Near the melting layer, Ze was characterized by a significant increase due to the aggregation and melting of ice crystals. The precipitation rate of convective clouds was generally greater than that of stratiform clouds, whilst both of them increased during the movement of the TPV. Particularly, at 01:00 on 12 July, there was a significant increase in the precipitation rate and Dm of convective clouds, while dBNw noticeably decreased. These findings could provide valuable insights into the three-dimensional structure and microphysical characteristics of the precipitation during the movement of the TPV, contributing to a better understanding of cloud precipitation mechanisms. Full article

In this study, we develop an Atmospheric Motion Vector (AMV)-based method for retrieving wind vectors using 183.31 GHz water-vapor absorption channels. The method involves tracking water-vapor features from image triplets and subsequently deriving wind fields from motion vectors. The height of the derived wind for each channel is determined by calculating the weighing function peak using monthly averaged ERA5 reanalysis data. By utilizing Microwave Humidity Sounder-II (MWHS-II) brightness temperatures from the five channels centered around 183.31 GHz, wind vectors are retrieved within the Arctic region for the entire year of 2022. The retrieval quality is evaluated through comparative analysis with ERA5 reanalysis data and the Visible Infrared Imaging Radiometer Suite (VIIRS) wind product. The resultant vector root mean square errors (RMSEs) are approximately 4.5 m/s for the three lower-height channels and 5.5 m/s for the two upper-height channels. These findings demonstrate a wind retrieval performance comparable to the existing methods, highlighting its potential for augmenting wind availability at lower height levels. Full article

The search for DNA polymorphisms useful for the genetic improvement of dairy farm animals has spanned more than 40 years, yielding relevant findings in cattle for milk traits, where the best combination of alleles for dairy processing has been found in casein genes and in DGAT1. Nowadays, similar results have not yet been reached in river buffaloes, despite the availability of advanced genomic technologies and accurate phenotype records. The aim of the present study was to investigate and validate the effect of four single nucleotide polymorphisms (SNP) in the CSN1S1, CSN3, SCD and LPL genes on seven milk traits in a larger buffalo population. These SNPs have previously been reported to be associated with, or affect, dairy traits in smaller populations often belonging to one farm. A total of 800 buffaloes were genotyped. The following traits were individually recorded, monthly, throughout each whole lactation period from 2010 to 2021: daily milk yield (dMY, kg), protein yield (dPY, kg) and fat yield (dFY, kg), fat and protein contents (dFP, % and dPP, %), somatic cell count (SCC, 10³ cell/mL) and urea (mg/dL). A total of 15,742 individual milk test day records (2496 lactations) were available for 680 buffalo cows, with 3.6 ± 1.7 parities (from 1 to 13) and an average of 6.1 ± 1.2 test day records per lactation. Three out four SNPs in the CSN1S1, CSN3 and LPL genes were associated with at least one of analyzed traits. In particular, the CSN1S1 (AJ005430:c.578C>T) gave favorable associations with all yield traits (dMY, p = 0.022; dPY, p = 0.014; dFY, p = 0.029) and somatic cell score (SCS, p = 0.032). The CSN3 (HQ677596: c.536C>T) was positively associated with SCS (p = 0.005) and milk urea (p = 0.04). Favorable effects on daily milk yield (dMY, p = 0.028), fat (dFP, p = 0.027) and protein (dPP, p = 0.050) percentages were observed for the LPL. Conversely, the SCD did not show any association with milk traits. This is the first example of a confirmation study carried out in the Mediterranean river buffalo for genes of economic interest in the dairy field, and it represents a very important indication for the preselection of young bulls destined for breeding programs aimed at more sustainable dairy production. Full article

The transport and dispersion (T&D) of catalyst particles seeded by weather modification aircraft is crucial for assessing their weather modification effects. This study investigates the capabilities of the Chinese geostationary weather satellite FY-4A for identifying the physical response of cloud seeding with AgI-based catalysts and continuously monitoring its evolution for a weather event that occurred on 15 December 2019 in Henan Province, China. Satellite measurements are also used to verify an operational catalyst T&D algorithm. The results show that FY-4A exhibits a remarkable capability of identifying the cloud-seeding tracks and continuously tracing their evolution for a period of over 3 h. About 60 min after the cloud seeding, the cloud crystallization track became clear in the FY-4A tri-channel composite cloud image and lasted for about 218 min. During this time period, the cloud track moved with the cloud system about 153 km downstream (northeast of the operation area). An operational catalyst T&D model was run to simulate the cloud track, and the outputs were extensively compared with the satellite observations. It was found that the forecast cloud track closely agreed with the satellite observations in terms of the track widths, morphology, and movement. Finally, the FY-4A measurements show that there were significant differences in the microphysical properties across the cloud track. The effective cloud radius inside the cloud track was up to 15 μm larger than that of the surrounding clouds; the cloud optical thickness was about 30 μm smaller; and the cloud-top heights inside the cloud track were up to 1 km lower. These features indicate that the cloud-seeding catalysts led to the development of ice-phase processes within the supercooled cloud, with the formation of large ice particles and some precipitation sedimentation. Full article

This study utilized an infrared spotlight Hyperspectral infrared Atmospheric Sounder (HIRAS) and the Medium Resolution Spectral Imager (MERSI) mounted on FY3D cloud products from the National Satellite Meteorological Center of China to obtain methane profile information. Methane inversion channels near 7.7 μm were selected based on the different distribution of methane weighting functions across different seasons and latitudes, and the selected retrieval channels had a great sensitivity to methane but not to other parameters. The optimization method was employed to retrieve methane profiles using these channels. The ozone profiles, temperature, and water vapor of the European Centre for Medium-Range Weather Forecasts (ECMWF) fifth-generation reanalysis data (ERA5) were applied to the retrieval process. After validating the methane profile concentrations retrieved by HIRAS, the following conclusions were drawn: (1) compared with Civil Aircraft for the Regular Investigation of the Atmosphere Based on an Instrument Container (CARIBIC) flight data, the average correlation coefficient, relative difference, and root mean square error were 0.73, 0.0491, and 18.9 ppbv, respectively, with lower relative differences and root mean square errors in low-latitude regions than in mid-latitude regions. (2) The methane profiles retrieved from May 2019 to September 2021 showed an average error within 60 ppbv compared with the Fourier transform infrared spectrometer (FTIR) station observations of the Infrared Working Group (IRWG) of the Network for the Detection of Atmospheric Composition Change (NDACC). The errors between the a priori and retrieved values, as well as between the retrieved and smoothed values, were larger by around 400–500 hPa. Apart from Toronto and Alzomoni, which had larger peak values in autumn and spring respectively, the mean column averaging kernels typically has a larger peak in summer. Full article