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Scomber japonicus (chub mackerel): 128379734
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Entry
128379734 CDS
T09718
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03082
ATP-dependent chromatin remodeling
sjo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128379734
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128379734
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128379734
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128379734
03036 Chromosome and associated proteins [BR:
sjo03036
]
128379734
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128379734
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128379734
SWI/SNF complex
128379734
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128379734
PBAF complex
128379734
SWI/SNF complex
128379734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
128379734
NCBI-ProteinID:
XP_053195336
LinkDB
All DBs
Position
19:complement(1994235..2000948)
Genome browser
AA seq
368 aa
AA seq
DB search
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggctcttagtaaaacgtttggccagaagccagttaaatttcaattagaacaa
gatggggacttctatatggttgggtctgaggttggaaactatctgcgtatgttcagaggc
tctttgtataaaagatacccatctttatggaggcggctggcctcagtggaggagaggaag
aaaattgtagcgtcgtcacatgccaccagtgtcactctgctcaaagcctcagagtgtgaa
gagatcttcgagggtaatgatgagaaatacaaggcggtgtccatcagcacagagcctcct
gcttacctccgggagcagaaagcaaagaggagcagtcagtgggtccccactctgcccaac
agctcccaccacctagacgctgtgccctgctccaccaccatcaaccgcaaccgcatggga
cgagacaagaaaaggaccttccctctgtgctttgatgaccatgatcctgcagtgatccat
gagaacgcagcccaggtagaagctctggttcccattcgtctagacatggagatagatgga
cagaagctgcgagatgccttcacatggaacatgaacgagaaactgatgactccagagatg
tttgcagagattctgtgtgatgacctggacctgaaccctctggccttcgtcccagccatc
gcctctgccatccgacagcagattgagtcctaccccactgacagtatactagaggagcag
gcagaccagagagtcatcatcaagctgaacatccacgtgggcaacatctctctagtggat
cagtttgagtgggacatgtcagagagggagaactccccagagtcttttgctctgaagctc
tgctctgagctgggtctgggtggagagttcgtcaccaccattgcctacagcatccgaggt
cagctcagctggcaccagaggacctacgccttcagtgagaacccgctgcccacagtagag
atcgccatccgcaacacaggcgacgcagaccaatggtgccccctgctggagaccctcaca
gacgctgagatggagaagaagatcagagaccaagacaggaacacaaggcgtatgagacga
ctggccaacaccgccccctcctggtag
DBGET
integrated database retrieval system