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KEGG   Patella vulgata (common limpet): 126823750
Entry
126823750         CDS       T09576                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pvul  Patella vulgata (common limpet)
Pathway
pvul03082  ATP-dependent chromatin remodeling
pvul03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    126823750
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    126823750
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pvul01009]
    126823750
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvul03021]
    126823750
   03036 Chromosome and associated proteins [BR:pvul03036]
    126823750
Protein phosphatases and associated proteins [BR:pvul01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     126823750
Transcription machinery [BR:pvul03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     126823750
    SWI/SNF complex
     126823750
Chromosome and associated proteins [BR:pvul03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    126823750
   PBAF complex
    126823750
   SWI/SNF complex
    126823750
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 126823750
NCBI-ProteinID: XP_050408677
LinkDB
Position
6:complement(59169852..59179204)
AA seq 379 aa
MMATAMTSFSTKTYGEKPRAFRLEENGELYYIGSEVGTYLRMFRGSLYKRYPSMWRRLVT
LEERKKISAMGFGQHSLATNITLLKVCEVDEIFKGSDEKYKAVSINSDSSMSFSRDSKQK
KAAWVPTIPTSSHHLDAVPCSTPINRNRLGKSKIRTFPLCFDDTDPTLNLENASIQEQLV
PIRLDMEFDGQKLRDCFTWNKNETLITPEQFAEILCDDLDLNPLNFVSAIAQAIRQQIEA
YPANEVIEEPSADQRVILKLNIHVGNISLVDQFEWDMSDKENNPEEFATKLCAELGLGGE
FVTCIAYSIRGQLSWHGRTYAFSEAPLPTVEVAIRNQHEADSWCPFLETLTDAEMEKKIR
DQDRNTRRMRRLANTAPAW
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgatggcgactgccatgaccagttttagtacaaagacgtatggtgaaaaaccacgagca
tttaggctagaagaaaatggggaactttattacatcggttctgaggtggggacatattta
cgtatgttccggggctccctttataaaagatatccatctatgtggcgacgactagttact
ctagaagaaaggaagaaaatatcagctatgggatttggccagcactcgctagctaccaat
ataactctgttaaaagtctgtgaagtggatgaaatctttaagggcagtgatgaaaaatat
aaggctgtttctatcaacagtgattcctccatgtccttcagcagagattcaaagcaaaag
aaagcagcctgggtaccaacaataccaaccagctctcatcatttagatgctgttccctgt
tctacacctattaatagaaatagactgggcaaatctaaaataagaacatttccattgtgt
tttgatgatactgacccaacattgaatttagaaaatgccagcattcaagaacaactagtg
ccaatcagactagatatggaatttgatggacagaaattaagagattgttttacttggaat
aaaaatgaaactttaataacaccagaacagtttgcagaaatattatgtgatgatttagac
ttgaatccgttaaattttgtatctgcaattgctcaagctattcgacaacaaatagaggca
tatcctgctaacgaagtaatcgaagaaccatcagcagaccaaagagttatattaaagtta
aatatacatgttggtaatatatcattagtggaccagtttgaatgggatatgtctgacaaa
gaaaataatccagaagaatttgctacaaaattatgtgctgaattaggtttaggtggtgaa
tttgtaacatgtatagcctatagtatcagaggacagcttagttggcatggtagaacatat
gcatttagtgaggctcctctacccacagtagaagtagctattagaaatcaacacgaagct
gattcatggtgtccattcctggaaacattaacggatgctgaaatggagaagaagatcaga
gatcaagacagaaacacaagacgtatgagacgattggcaaacacagccccagcatggtga

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