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Sciurus carolinensis (gray squirrel): 124990619
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Entry
124990619 CDS
T08117
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03082
ATP-dependent chromatin remodeling
ncar03250
Viral life cycle - HIV-1
ncar04714
Thermogenesis
ncar05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124990619
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124990619
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
124990619
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
124990619
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124990619
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124990619
03036 Chromosome and associated proteins [BR:
ncar03036
]
124990619
Protein phosphatases and associated proteins [BR:
ncar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124990619
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124990619
SWI/SNF complex
124990619
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124990619
PBAF complex
124990619
SWI/SNF complex
124990619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
124990619
NCBI-ProteinID:
XP_047416753
LinkDB
All DBs
Position
8:complement(120681087..120713010)
Genome browser
AA seq
385 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcactgagtaagaccttcgggcaaaagcccgtcaagttccagctggag
gacgacggcgaattctacatgatcggctctgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcgctctggaggcgtctagccactgtggaagagagg
aagaaaatagttgcatcgtcacatggtaaaaaaacaaaacctaacactaaggatcatgga
tataccactctggccaccagtgtgactctgttaaaagcctcagaggtagaagagatcctg
gatggcaatgatgagaagtacaaggctgtgtcaatcagcacagagcctcccacatacctc
agggaacagaaggccaagaggaacagccagtgggtacccactttgcccaatagctcccat
catctggatgctgtgccatgttccaccaccatcaataggaaccgcatgggccgggacaag
aagagaactttccccctttgctttgatgatcatgacccagctgtaatccatgagaatgca
tcccagcctgaggttctggtgcccatccggctggacatggagattgatgggcagaagctg
cgggatgcttttacttggaacatgaatgagaagctcatgacccctgagatgttttcagaa
atcctttgtgatgatttggatttgaacccactcacattcgtaccagccattgcctctgcc
atcagacagcagatcgagtcctaccccacagacagcatcttggaggaccagtctgaccag
cgtgtcatcatcaagctgaatatccacgtgggaaacatctccttggtggaccagtttgag
tgggacatgtcggagaaggagaactcaccagagaagtttgccctgaagttgtgctcagag
ctggggttgggcggggagtttgtcaccaccatcgcgtacagcatccggggacaactgagc
tggcatcagaagacctatgccttcagtgagaaccccttacccacggtggaaattgctatc
cggaacacgggtgatgcagaccagtggtgcccactactagagactctgactgatgctgaa
atggagaagaagatccgagaccaggacaggaacacaaggcggatgaggcgtcttgccaat
actgccccagcctggtga
DBGET
integrated database retrieval system