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KEGG   Fragaria vesca (woodland strawberry): 101310505
Entry
101310505         CDS       T02666                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03082  ATP-dependent chromatin remodeling
fve03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101310505
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    101310505
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:fve01009]
    101310505
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fve03021]
    101310505
   03036 Chromosome and associated proteins [BR:fve03036]
    101310505
Protein phosphatases and associated proteins [BR:fve01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101310505
Transcription machinery [BR:fve03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     101310505
    SWI/SNF complex
     101310505
Chromosome and associated proteins [BR:fve03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    101310505
   PBAF complex
    101310505
   SWI/SNF complex
    101310505
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 101310505
NCBI-ProteinID: XP_004297005
LinkDB
Position
LG4:14880382..14883023
AA seq 238 aa
MKGHAPKGTVKKFRMPTSQNLVPIRVDFEVEGQRFKDTFTWNPSDHDSEIVKFAKATVKD
LKLSSNYEKAIVNSIQSQIEIFRSFQGQDMYTGERIVPIKLDLRVNHTLIRDQFLWDLNN
FESDPEEFAKTLCADLGVHDPEVGPAIAFAIREQLYEIAVQNVASARESRLAKKGRRGGD
HTPLSKASSTGLDLVKSFGHKSTVIRKRKEWDVYEPIVDLLSSEEVDALEAKEERNAR
NT seq 717 nt   +upstreamnt  +downstreamnt
atgaaaggccacgctcccaaaggcactgtcaagaagttcagaatgcccacttcccagaat
ctagtcccaattcgcgtcgatttcgaagtcgaaggccagaggttcaaagacaccttcact
tggaacccatctgaccatgatagcgagattgtcaagtttgcgaaagcaacagttaaagac
ttgaagctgtcttccaattacgagaaagccattgttaattccattcagagccaaattgag
attttccgatcgttccaaggccaagatatgtacaccggcgagaggattgttccgattaag
cttgatcttcgtgtgaaccatactctcatcagggaccagtttttatgggacttgaacaac
tttgaaagtgatccggaggagtttgctaaaaccttgtgtgcagatttaggtgttcatgac
cctgaagttggtcctgcaattgcttttgctattagagaacagctgtatgagattgcagtc
caaaatgtagcttcagcaagagaaagcagactagccaagaaagggcgtcgagggggtgat
catactccactcagtaaagcaagtagtaccggattggacctggtcaagtcatttggtcac
aaatctactgtcattcggaaaagaaaggagtgggatgtgtatgaacccattgttgatctt
ctatctagtgaggaagttgatgctctcgaagcaaaagaagaaaggaatgctcggtaa

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