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Dermochelys coriacea (leatherback sea turtle): 119843491
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Entry
119843491 CDS
T09064
Symbol
SMARCB1
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03082
ATP-dependent chromatin remodeling
dcc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119843491 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119843491 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcc01009
]
119843491 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119843491 (SMARCB1)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119843491 (SMARCB1)
Protein phosphatases and associated proteins [BR:
dcc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119843491 (SMARCB1)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119843491 (SMARCB1)
SWI/SNF complex
119843491 (SMARCB1)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119843491 (SMARCB1)
PBAF complex
119843491 (SMARCB1)
SWI/SNF complex
119843491 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
119843491
NCBI-ProteinID:
XP_038228725
LinkDB
All DBs
Position
15:complement(13144318..13164228)
Genome browser
AA seq
386 aa
AA seq
DB search
MMMMALSKPSGRSXVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHESQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTY
LREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN
ASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIAS
AIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCS
ELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDA
EMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaaaccttcgggcagaagcnncgtcaagttccagctggag
gaggacggcgagttctacatgatcgggtccgaggtggggaactacctacgtatgtttcgt
ggctccctatacaaaaggtatccctccctctggaggcgactagccacagtagaagagagg
aagaaaatagttgcatcttcgcatgagtctcagcggagtcacagccccagaagatatcat
ggttatacaacactagccactagtgtgactctcttgaaagcctctgaagtggaagagatc
ttggatggaaatgatgagaaatacaaggcagtgtctatcagcacagagcctcccacctac
ctcagagagcagaaggcaaaaaggaataaccagtgggtgccaaccctacccaacagctct
catcacctcgatgctgtgccatgctcgacaaccatcaacagaaaccgcatgggcagggat
aagaagagaaccttcccgctctgctttgatgaccatgacccagcagtaatccatgagaat
gcatcccagccagaggttctggttccaatccgattggacatggaaatcgatgggcagaaa
ctcagagatgcttttacgtggaacatgaatgaaaagctaatgaccccagaaatgttctcg
gagattctctgtgatgacctggatttgaatcctctgacctttgtccctgccattgcctct
gcaattcgacaacagattgagtcttatccaactgacagtatcctagaggaccaatcagat
caacgagttattattaagctaaatatccacgtggggaacatttccctggtagaccagttt
gaatgggacatgtcggagaaggagaactccccggagaagtttgcactgaagctgtgttca
gagcttgggctgggtggggaatttgtcaccaccatcgcttacagcattcggggacagctg
agctggcatcagaagacttatgccttcagtgagaaccctctgccaaccgtagagatcgcc
attcgcaacacaggtgatgctgaccagtggtgccctctgctcgaaaccctgacggacgca
gagatggagaagaagatccgagaccaagacagaaacacaaggcgcatgagacgtttggcc
aacactgctccagcctggtaa
DBGET
integrated database retrieval system