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KEGG   Culex pipiens pallens (northern house mosquito): 120419241
Entry
120419241         CDS       T07310                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Pathway
cpii03082  ATP-dependent chromatin remodeling
cpii03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120419241
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120419241
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cpii01009]
    120419241
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpii03021]
    120419241
   03036 Chromosome and associated proteins [BR:cpii03036]
    120419241
Protein phosphatases and associated proteins [BR:cpii01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120419241
Transcription machinery [BR:cpii03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     120419241
    SWI/SNF complex
     120419241
Chromosome and associated proteins [BR:cpii03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    120419241
   PBAF complex
    120419241
   SWI/SNF complex
    120419241
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 120419241
NCBI-ProteinID: XP_039437829
LinkDB
Position
3:complement(174955439..174956775)
AA seq 369 aa
MSLKTYGDKPVSFQIEDGGEYFCIGSEVGNYLRLFRGLLYKKYPGMLRRTLSPEERKKLL
DSGISNQFLASSVSLLRASEVAEILEGNDEKYKAVAVTASEPPAPRESKSTKKQPPWVPT
MPNSSHLDAVPQATPINRNRVYNKKVRTFPMCFDDTDPTVNVENSAQTEVLVPIRLDMEI
EGQKLRDTFTWNRNECMITPEQFAEVLCDDLDLNPTPFVPAIAAAIRQQIEAYPSEPVVL
EEGSDQRVLVKLNIHVGNTSLVDQVEWDMAEKENNPEDFAIKLCAELGLGGEFVTAISYS
IRGQLSWHQRTYAFSETPLATVEVPFRTPSDADQWAPFLETLTDAEMEKKIRDQDRNTRR
MRRLANTYT
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgtccctcaagacgtacggcgacaagccggtcagcttccagatcgaggatgggggcgag
tatttctgcatcggttccgaggtggggaattacttgcggctgttccgagggttgctgtac
aagaagtacccggggatgttgcggaggacgttgagtccggaggagaggaagaagctgctg
gactcggggattagcaatcagtttttggcgagttcggtttcgctgttgagggcttccgag
gtggcggagatattggaggggaatgatgagaagtacaaggcggtggccgtaacggcttcg
gagccgccggcgcctcgcgagagcaagtcgaccaagaagcaaccgccgtgggttccgacg
atgccgaattcgagccatttggatgcggttccgcaggccactccgattaacaggaaccgg
gtttacaacaagaaggttcgcacgtttccgatgtgtttcgacgatacggatccgacggtg
aatgtggagaactcggcccagacggaggtgttggtgccgatccggttggatatggagatt
gaagggcagaagttgcgggacactttcacctggaaccggaacgagtgcatgattacgccg
gagcagtttgcggaggttctgtgcgatgatttggatttgaatccgacgccgtttgtgccg
gccattgcggcagcgatccggcagcagatcgaggcctatccgagtgagccggttgtgttg
gaggagggatctgaccagcgcgtgctggtcaagctgaacattcacgtgggcaacacctcg
ctggtggaccaggtcgagtgggacatggccgagaaggaaaacaatccggaagactttgcg
atcaagctgtgcgcggagctgggactgggcggtgagttcgtgaccgccatttcgtactcg
atccggggccagctgtcgtggcaccagcgcacgtacgctttcagcgagactccgctggcg
acggtggaggttccgttccggacaccgagcgatgccgaccagtgggctccgttcctggag
acgctgaccgacgccgagatggagaagaagattcgcgaccaggaccggaacacgcgacga
atgcgccgtctggccaacacgtacacgtaa

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