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KEGG   Colletes gigas: 122401404
Entry
122401404         CDS       T07492                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cgig  Colletes gigas
Pathway
cgig03082  ATP-dependent chromatin remodeling
cgig03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cgig00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122401404
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122401404
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cgig01009]
    122401404
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgig03021]
    122401404
   03036 Chromosome and associated proteins [BR:cgig03036]
    122401404
Protein phosphatases and associated proteins [BR:cgig01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122401404
Transcription machinery [BR:cgig03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     122401404
    SWI/SNF complex
     122401404
Chromosome and associated proteins [BR:cgig03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    122401404
   PBAF complex
    122401404
   SWI/SNF complex
    122401404
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 122401404
NCBI-ProteinID: XP_043259437
LinkDB
Position
Unknown
AA seq 385 aa
MGPGFGVDSTSEYTINMALRTYGDKPISFQVEENGEYYCIGSEVGNYLRLFRGSLYKRYP
GMFRRSITNDERKKLVELGLSQHVLASSVSLLRASEVEDIIEGNDDKYKAVSVHSTEPPA
PREGKSKKSMPWVPSLPNSSHLDAVPQATPINRNRVHNKKVRTFPLCFDDTDPSANLENA
AQQEMLVPIRLDMEIEGQKLRDTFTWNKNESLITPEQFAEVLCDDLDLNPLTFVPAIAQA
IRQQIEAFPQETILEDQCDQRVIIKLNIHVGNTSLVDQVEWDMSEKENNPEKFAMKLCAE
LGLGGEFVTAIAYSVRGQLSWHQRTYAFSEAPLPTVEVPFRPPSEADQWAPFLETLTDAE
MEKKIRDQDRNTRRMRRLANTTPGW
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgggaccaggatttggagttgattccacttctgaatataccataaatatggctttgcgc
acatatggtgataaacctataagttttcaagtagaagaaaatggagagtactattgtatt
ggatctgaagtgggcaattatttacgcctatttcgaggatcattatacaaacgttatcct
ggaatgttcaggagatccattacaaatgatgagcgtaaaaagctagtagaacttggatta
agccaacatgtacttgcatctagtgtatcacttttaagagctagtgaagtagaagatatt
attgaaggcaatgatgataaatataaagctgtatcagtacattcaacagaacctccagcc
cctagagaaggaaaatcaaaaaaatcaatgccttgggtgcctagtttaccaaatagttca
cacctagatgctgtgcctcaagccacacctattaatcgtaatagagtacataataagaaa
gtcagaacatttcccttgtgtttcgacgatacagatccatcagcaaatttagaaaatgca
gctcaacaggagatgctggttccaattcgtttagatatggagattgagggacaaaagttg
agagatacttttacatggaataaaaatgaaagccttataacaccagaacaatttgctgaa
gttttatgtgacgatttagatttaaatccattaacatttgtgccagctattgcacaagct
ataagacaacaaatagaagccttcccacaagaaaccattctagaagatcaatgcgatcaa
agagttattattaagttaaatatacatgtgggtaatacatctttagtagatcaagtagaa
tgggatatgtctgaaaaagaaaataatcctgaaaaatttgcaatgaaactgtgtgctgag
ttgggtcttggtggagaatttgttactgcgattgcttatagtgttcgcggacaactatca
tggcatcaaagaacatatgcgttttctgaagcccctctgcctacagtggaagtacctttt
aggccaccctcagaagctgatcaatgggcaccgtttttagaaacattaacagatgcagaa
atggagaagaaaatacgcgaccaggatcgaaatacgcggcgtatgagacgtttagcaaat
actacaccaggatggtaa

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